Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 3.2e-80 301.6 142 100.0
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.7e-55 218.8 137 71.5
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 2.7e-55 218.8 137 71.5
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 7.9e-55 217.2 135 73.3
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 3.9e-54 214.9 136 71.3
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 6.7e-54 214.2 135 74.1
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 1.1e-53 213.4 135 73.3
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 4.3e-53 211.5 134 73.9
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 5.7e-53 211.1 136 72.8
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 7.4e-53 210.7 135 71.9
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.6e-52 209.5 135 70.4
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.2e-52 209.1 134 71.6
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 2.2e-52 209.1 137 68.6
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 2.2e-52 209.1 135 70.4
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 2.8e-52 208.8 137 70.1
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 2.8e-52 208.8 135 71.1
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 8.2e-52 207.2 137 68.6
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.1e-51 206.8 135 70.4
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.1e-51 206.8 141 68.1
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 3.1e-51 205.3 135 69.6
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 3.1e-51 205.3 137 69.3
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 4.1e-51 204.9 137 69.3
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 5.3e-51 204.5 138 68.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 9.1e-51 203.8 135 68.1
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 2.0e-50 202.6 135 68.1
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.6e-50 202.2 137 70.1
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 5.9e-50 201.1 137 67.9
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 7.7e-50 200.7 135 68.1
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 7.7e-50 200.7 135 68.1
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.3e-49 199.9 137 69.3
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.9e-49 198.7 141 66.7
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 5.0e-49 198.0 135 65.2
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 6.5e-49 197.6 136 67.6
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.1e-48 196.8 134 66.4
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.1e-48 196.8 135 67.4
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.1e-48 196.8 135 67.4
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 1.9e-48 196.1 134 65.7
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 1.9e-48 196.1 135 64.4
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 1.9e-48 196.1 135 65.2
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.5e-48 195.7 135 63.7
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.2e-48 195.3 135 64.4
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 5.5e-48 194.5 136 68.4
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 9.4e-48 193.7 135 63.7
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.4e-48 193.7 135 63.7
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.1e-47 192.6 134 64.2
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 2.1e-47 192.6 138 63.8
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.6e-47 191.4 135 62.2
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 4.6e-47 191.4 176 55.7
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.0e-46 190.3 138 64.5
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.4e-46 189.9 139 64.0
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.8e-46 189.5 137 65.7
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 2.3e-46 189.1 138 63.8
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 8.8e-46 187.2 134 64.2
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.5e-45 186.4 138 63.8
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 2.0e-45 186.0 140 61.4
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 2.0e-45 186.0 138 63.0
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 3.7e-44 181.8 118 70.3
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 3.7e-44 181.8 139 62.6
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 8.2e-44 180.6 137 62.8
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 8.2e-44 180.6 138 63.0
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.4e-43 179.9 137 60.6
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 2.4e-43 179.1 137 63.5
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.2e-42 176.8 119 68.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.5e-42 176.4 139 59.7
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 4.5e-42 174.9 117 71.8
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.0e-41 173.7 165 52.7
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 3.8e-41 171.8 171 50.9
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.4e-40 169.9 117 68.4
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.1e-39 166.0 120 65.8
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.1e-39 166.0 137 59.1
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 4.7e-39 164.9 107 69.2
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 2.3e-38 162.5 110 66.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 2.0e-37 159.5 109 67.9
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.6e-37 159.1 151 53.6
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 9.7e-37 157.1 108 64.8
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.3e-36 156.8 137 59.9
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.3e-36 156.8 100 68.0
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 6.3e-36 154.5 100 68.0
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 1.4e-35 153.3 103 70.9
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 2.6e-34 149.1 101 67.3
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.7e-33 146.4 119 59.7
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 2.2e-33 146.0 101 61.4
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 6.5e-33 144.4 119 59.7
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.1e-32 143.7 89 71.9
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-32 143.7 140 50.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 4.2e-32 141.7 136 50.0
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 5.5e-32 141.4 140 50.0
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.6e-31 138.7 101 63.4
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 3.0e-30 135.6 121 59.5
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 6.7e-30 134.4 138 50.0
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 8.8e-30 134.0 122 52.5
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.5e-29 133.3 135 48.9
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 2.2e-28 129.4 115 51.3
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 2.8e-28 129.0 139 48.2
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 8.2e-28 127.5 77 70.1
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 5.3e-27 124.8 159 44.7
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 9.1e-27 124.0 137 48.9
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 4.5e-26 121.7 82 72.0
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 5.9e-26 121.3 75 76.0
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 1.7e-25 119.8 106 57.5
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 3.2e-24 115.5 129 46.5
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 9.4e-24 114.0 109 52.3
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 3.6e-23 112.1 92 62.0
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 6.1e-23 111.3 139 43.9
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.1e-23 111.3 106 53.8
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 5.2e-22 108.2 83 57.8
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 9.8e-21 104.0 118 41.5
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-20 102.1 113 49.6
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 2.4e-19 99.4 120 41.7
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 1.3e-17 93.6 71 60.6
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.3e-17 92.8 88 53.4
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 5.5e-16 88.2 68 60.3
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 5.2e-14 81.6 127 42.5
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.3e-08 62.0 59 54.2
Cre06.g273000 Chlamydomonas reinhardtii HOM05D002397 ORTHO05D002667 6.1e-07 58.2 102 33.3
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 2.3e-06 56.2 46 58.7
AagrBONN_evm.TU.Sc2ySwM_344.2061 Anthoceros agrestis HOM05D002397 ORTHO05D002667 5.2e-06 55.1 102 28.4
CDE04G2843 Ceratophyllum demersum HOM05D002397 ORTHO05D002667 6.8e-06 54.7 102 30.4
Aqoxy7G03928 Aquilegia oxysepala HOM05D002397 ORTHO05D002667 8.9e-06 54.3 102 32.4
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 8.9e-06 54.3 33 69.7
Sc24g0002730 Simmondsia chinensis HOM05D002397 ORTHO05D002667 8.9e-06 54.3 102 31.4


User provided reference genes

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