Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 2.1e-54 216.1 172 100.0
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 1.1e-34 150.6 87 90.8
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.2e-10 69.3 64 54.7
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 8.0e-09 64.7 67 44.8
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.0e-08 64.3 64 48.4
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 1.8e-08 63.5 64 48.4
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.8e-08 63.5 60 48.3
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.9e-08 62.4 67 43.3
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 3.9e-08 62.4 66 42.4
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 5.2e-08 62.0 59 52.5
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 2.6e-07 59.7 60 50.0
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.6e-07 59.7 60 48.3
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.6e-07 59.7 95 40.0
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 3.3e-07 59.3 49 57.1
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 5.7e-07 58.5 64 48.4
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 5.7e-07 58.5 63 46.0
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 9.7e-07 57.8 60 46.7
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 9.7e-07 57.8 65 41.5
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 9.7e-07 57.8 63 46.0
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.3e-06 57.4 67 41.8
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.7e-06 57.0 63 39.7
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.7e-06 57.0 63 39.7
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.7e-06 57.0 60 46.7
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.8e-06 56.2 63 46.0
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 2.8e-06 56.2 66 43.9
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 2.8e-06 56.2 61 42.6
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 3.7e-06 55.8 64 45.3
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 4.8e-06 55.5 63 42.9
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 4.8e-06 55.5 86 36.0
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 6.3e-06 55.1 64 45.3
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 6.3e-06 55.1 88 37.5
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 6.3e-06 55.1 64 46.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 8.2e-06 54.7 59 44.1
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 8.2e-06 54.7 59 45.8
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 8.2e-06 54.7 63 41.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 8.2e-06 54.7 63 42.9
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 8.2e-06 54.7 59 45.8


User provided reference genes

Program Settings