Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 7.2e-130 467.2 232 100.0
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.1e-114 416.8 234 87.6
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 1.5e-114 416.4 232 87.9
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 1.2e-113 413.3 232 87.5
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 1.6e-113 412.9 234 86.3
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.7e-113 412.1 234 87.2
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 4.0e-112 408.3 238 84.9
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 4.0e-112 408.3 234 85.5
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 5.2e-112 407.9 242 84.3
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 4.4e-111 404.8 233 86.3
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 7.5e-111 404.1 233 85.0
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 9.7e-111 403.7 236 84.3
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.7e-110 402.9 233 85.8
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 2.8e-110 402.1 235 84.3
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 4.8e-110 401.4 238 84.9
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.8e-109 399.4 232 83.6
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.8e-109 399.4 236 84.3
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 2.4e-109 399.1 232 85.8
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 4.1e-109 398.3 232 84.9
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 7.0e-109 397.5 230 85.2
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 1.6e-108 396.4 232 84.9
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 2.0e-108 396.0 232 84.5
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 5.9e-108 394.4 234 84.2
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 5.9e-108 394.4 236 83.1
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 7.7e-108 394.0 234 84.2
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.0e-107 393.7 239 82.4
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 2.2e-107 392.5 226 84.1
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.2e-107 392.5 226 84.1
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.2e-107 392.5 226 84.1
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.2e-107 392.5 235 82.6
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 2.9e-107 392.1 233 81.5
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 3.8e-107 391.7 241 80.5
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 5.0e-107 391.3 232 83.2
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.5e-107 391.0 226 83.2
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 6.5e-107 391.0 232 82.8
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 6.5e-107 391.0 232 83.6
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 8.5e-107 390.6 233 81.5
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.1e-106 390.2 226 83.2
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.1e-106 390.2 226 83.2
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 1.1e-106 390.2 234 82.5
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.9e-106 389.4 232 82.3
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.5e-106 389.0 240 80.8
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 3.2e-106 388.7 247 80.2
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 5.5e-106 387.9 239 80.8
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 9.4e-106 387.1 234 82.9
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 9.4e-106 387.1 232 81.5
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 9.4e-106 387.1 233 80.7
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 1.2e-105 386.7 239 80.8
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.2e-105 386.7 236 81.4
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 2.1e-105 386.0 237 82.7
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 2.1e-105 386.0 232 81.5
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 3.6e-105 385.2 234 82.1
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 3.6e-105 385.2 231 82.7
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 3.6e-105 385.2 232 82.3
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 6.1e-105 384.4 233 81.1
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 8.0e-105 384.0 233 79.4
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 1.0e-104 383.6 232 82.3
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 1.4e-104 383.3 233 81.5
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.8e-104 382.9 224 81.7
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.8e-104 382.9 224 81.7
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 2.3e-104 382.5 234 81.6
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.8e-104 380.9 230 80.9
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 2.6e-103 379.0 236 80.9
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 3.4e-103 378.6 232 79.3
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 9.8e-103 377.1 233 79.4
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 1.3e-102 376.7 240 78.8
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 1.7e-102 376.3 219 82.2
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 2.2e-102 375.9 233 82.0
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 2.2e-102 375.9 224 80.8
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 4.8e-102 374.8 236 79.2
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 8.3e-102 374.0 234 79.5
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 1.4e-101 373.2 224 80.4
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 1.8e-101 372.9 235 76.6
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 4.1e-101 371.7 240 75.8
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 5.4e-101 371.3 223 81.2
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 7.0e-101 370.9 224 79.5
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 2.7e-100 369.0 232 78.0
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 1.3e-99 366.7 232 75.9
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 1.7e-99 366.3 232 76.7
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 1.7e-99 366.3 232 75.0
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 1.7e-99 366.3 232 75.0
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 2.3e-99 365.9 233 75.5
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 2.9e-99 365.5 232 74.6
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 3.8e-99 365.2 232 76.3
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 5.0e-99 364.8 219 81.3
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 6.5e-99 364.4 233 75.5
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 6.5e-99 364.4 232 75.9
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 8.6e-99 364.0 232 75.4
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.5e-98 363.2 232 80.2
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.9e-98 362.8 219 79.0
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 3.2e-98 362.1 232 75.4
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 3.2e-98 362.1 232 74.6
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 9.5e-98 360.5 239 72.8
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 2.1e-97 359.4 230 76.1
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 4.7e-97 358.2 228 75.4
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 4.7e-97 358.2 228 77.2
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 1.0e-96 357.1 233 74.7
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 1.8e-96 356.3 223 74.0
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 4.0e-96 355.1 230 75.2
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 1.2e-95 353.6 232 73.7
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.5e-95 353.2 240 72.9
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.6e-95 352.4 238 74.4
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 4.4e-95 351.7 233 75.5
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 2.2e-94 349.4 232 73.7
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 9.2e-93 344.0 233 74.7
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.2e-92 343.6 232 71.6
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 2.0e-92 342.8 256 66.8
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 7.8e-92 340.9 232 73.7
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 6.6e-91 337.8 302 59.6
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 8.6e-91 337.4 240 73.3
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 2.5e-90 335.9 329 57.1
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 2.8e-89 332.4 226 71.2
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 8.0e-89 330.9 187 87.2
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 8.9e-88 327.4 226 68.1
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 2.0e-87 326.2 226 67.3
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 9.8e-87 323.9 232 69.0
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 4.9e-86 321.6 232 64.7
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 8.3e-86 320.9 196 78.6
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 1.1e-85 320.5 232 67.2
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 5.4e-85 318.2 232 68.1
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 7.0e-85 317.8 198 81.3
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 7.0e-85 317.8 192 81.8
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 9.5e-82 307.4 191 76.4
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 2.1e-81 306.2 237 67.1
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 3.6e-73 278.9 168 81.0
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 2.2e-70 269.6 197 69.0
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 2.4e-64 249.6 168 74.4
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.2e-62 243.0 238 56.3
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.7e-59 233.4 157 68.2
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 9.6e-58 227.6 220 52.7
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 3.3e-42 176.0 118 68.6
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 4.6e-36 155.6 105 73.3
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 5.1e-35 152.1 189 38.1
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 3.8e-30 136.0 97 75.3
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 1.3e-25 120.9 209 34.0
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 2.5e-13 80.1 41 90.2


User provided reference genes

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