Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G094 Amborella trichopoda HOM05D007124 ORTHO05D008980 5.1e-31 137.1 69 100.0
Nitab4.5_0000755g0100 Nicotiana tabacum HOM05D007124 ORTHO05D008980 5.4e-25 117.1 67 83.6
MBI15_g24201_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 7.1e-25 116.7 67 82.1
Peaxi162Scf00040g00004 Petunia axillaris HOM05D007124 ORTHO05D008980 7.1e-25 116.7 65 84.6
Sopen11g027200 Solanum pennellii HOM05D007124 ORTHO05D008980 7.1e-25 116.7 64 85.9
PGSC0003DMG400026339 Solanum tuberosum HOM05D007124 ORTHO05D008980 7.1e-25 116.7 64 85.9
MBI08_g04916_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 1.6e-24 115.5 67 80.6
Nitab4.5_0010969g0020 Nicotiana tabacum HOM05D007124 ORTHO05D008980 1.6e-24 115.5 67 83.6
Hma1.2p1_1332F.1_g276070 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 7.8e-24 113.2 67 80.6
Nn1g07252 Nelumbo nucifera HOM05D007124 ORTHO05D008980 7.8e-24 113.2 66 81.8
Hma1.2p1_0036F.1_g023250 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 1.0e-23 112.8 67 80.6
Lsat_1_v5_gn_5_3160 Lactuca sativa HOM05D007124 ORTHO05D008980 2.3e-23 111.7 68 79.4
CSS0015017 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 3.0e-23 111.3 66 81.8
Oeu013124.1 Olea europaea HOM05D007124 ORTHO05D008980 3.0e-23 111.3 68 76.5
Os11g0516100 Oryza sativa ssp. japonica HOM05D007124 ORTHO05D008980 3.0e-23 111.3 67 77.6
Migut.H01802 Erythranthe guttata HOM05D007124 ORTHO05D008980 5.1e-23 110.5 68 76.5
CSS0008346 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 8.6e-23 109.8 66 80.3
CSS0017817 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 8.6e-23 109.8 66 80.3
Eucgr.F00713 Eucalyptus grandis HOM05D007124 ORTHO05D008980 8.6e-23 109.8 67 77.6
DCAR_009645 Daucus carota HOM05D007124 ORTHO05D008980 1.5e-22 109.0 66 75.8
Sc12g0005860 Simmondsia chinensis HOM05D007124 ORTHO05D008980 1.5e-22 109.0 68 77.9
Actinidia32270 Actinidia chinensis HOM05D002089 ORTHO05D002848 1.9e-22 108.6 64 78.1
Ciclev10009664m.g Citrus clementina HOM05D007124 ORTHO05D008980 1.9e-22 108.6 68 77.9
CSS0011277 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 2.5e-22 108.2 66 78.8
Duzib170G0848 Durio zibethinus HOM05D007124 ORTHO05D008980 2.5e-22 108.2 68 76.5
Duzib213G1022 Durio zibethinus HOM05D007124 ORTHO05D008980 2.5e-22 108.2 68 76.5
Ciclev10010691m.g Citrus clementina HOM05D007124 ORTHO05D008980 3.3e-22 107.8 68 73.5
Manes.12G070300 Manihot esculenta HOM05D007124 ORTHO05D008980 3.3e-22 107.8 64 76.6
EL10Ac7g17641 Beta vulgaris HOM05D007124 ORTHO05D008980 4.3e-22 107.5 68 79.4
THA.LOC104811625 Tarenaya hassleriana HOM05D007124 ORTHO05D008980 4.3e-22 107.5 68 73.5
TWI39G0219 Tripterygium wilfordii HOM05D007124 ORTHO05D008980 7.3e-22 106.7 66 75.8
FAN16G3348 Fragaria x ananassa HOM05D007124 ORTHO05D008980 9.6e-22 106.3 68 72.1
Gohir.1Z049637 Gossypium hirsutum HOM05D007124 ORTHO05D008980 9.6e-22 106.3 68 75.0
Gohir.D05G373400 Gossypium hirsutum HOM05D007124 ORTHO05D008980 9.6e-22 106.3 68 75.0
Gorai.009G442100 Gossypium raimondii HOM05D007124 ORTHO05D008980 9.6e-22 106.3 68 75.0
Cpa.g.sc12.260 Carica papaya HOM05D007124 ORTHO05D008980 1.2e-21 105.9 68 73.5
FvH4_3g23350 Fragaria vesca HOM05D007124 ORTHO05D008980 1.2e-21 105.9 67 73.1
SGA_v2.0_scaffold363G49951 Striga asiatica HOM05D007124 ORTHO05D008980 1.2e-21 105.9 68 73.5
Thecc.07G030700 Theobroma cacao HOM05D007124 ORTHO05D008980 1.2e-21 105.9 68 76.5
Sed0025305 Sechium edule HOM05D007124 ORTHO05D008980 1.6e-21 105.5 67 74.6
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 2.8e-21 104.8 68 73.5
FAN11G2242 Fragaria x ananassa HOM05D007124 ORTHO05D008980 2.8e-21 104.8 67 71.6
FAN21G2784 Fragaria x ananassa HOM05D007124 ORTHO05D008980 2.8e-21 104.8 68 70.6
FAN25G2055 Fragaria x ananassa HOM05D007124 ORTHO05D008980 2.8e-21 104.8 67 71.6
PSO675G6679 Papaver somniferum HOM05D007124 ORTHO05D008980 2.8e-21 104.8 67 70.1
Aqoxy1G03004 Aquilegia oxysepala HOM05D007124 ORTHO05D008980 3.6e-21 104.4 64 75.0
FAN02G4031 Fragaria x ananassa HOM05D007124 ORTHO05D008980 3.6e-21 104.4 67 71.6
PGR004G2244 Punica granatum HOM05D007124 ORTHO05D008980 3.6e-21 104.4 68 73.5
SGA_v2.0_scaffold120G32846 Striga asiatica HOM05D007124 ORTHO05D008980 3.6e-21 104.4 59 81.4
CiPaw.12G132500 Carya illinoinensis HOM05D007124 ORTHO05D008980 4.7e-21 104.0 61 77.0
Medtr2g014910 Medicago truncatula HOM05D007124 ORTHO05D008980 4.7e-21 104.0 64 75.0
Potri.001G314100 Populus trichocarpa HOM05D007124 ORTHO05D008980 4.7e-21 104.0 67 71.6
RcHm_v2.0_Chr5g0041121 Rosa chinensis HOM05D007124 ORTHO05D008980 6.2e-21 103.6 67 70.1
Sp6g17060 Schrenkiella parvula HOM05D007124 ORTHO05D008980 6.2e-21 103.6 68 70.6
A10p12390 Brassica napus HOM05D007124 ORTHO05D008980 8.1e-21 103.2 68 70.6
C09p45870 Brassica napus HOM05D007124 ORTHO05D008980 8.1e-21 103.2 68 70.6
BraA10t43334Z Brassica rapa HOM05D007124 ORTHO05D008980 8.1e-21 103.2 68 70.6
CiPaw.11G193400 Carya illinoinensis HOM05D007124 ORTHO05D008980 8.1e-21 103.2 61 77.0
FvH4_6g31480 Fragaria vesca HOM05D007124 ORTHO05D008980 8.1e-21 103.2 67 71.6
FAN05G4905 Fragaria x ananassa HOM05D007124 ORTHO05D008980 8.1e-21 103.2 62 74.2
Ah.15g092770 Amaranthus hybridus HOM05D007124 ORTHO05D008980 1.1e-20 102.8 68 76.5
AL8G30630 Arabidopsis lyrata HOM05D007124 ORTHO05D008980 1.1e-20 102.8 68 72.1
AT5G55125 Arabidopsis thaliana HOM05D007124 ORTHO05D008980 1.1e-20 102.8 68 72.1
Carub.0008s1542 Capsella rubella HOM05D007124 ORTHO05D008980 1.1e-20 102.8 68 72.1
Lalb_Chr18g0059321 Lupinus albus HOM05D007124 ORTHO05D008980 1.1e-20 102.8 68 69.1
Medtr2g014940 Medicago truncatula HOM05D007124 ORTHO05D008980 1.1e-20 102.8 64 75.0
BcaC03g14263 Brassica carinata HOM05D007124 ORTHO05D008980 1.4e-20 102.4 64 73.4
A02p09870 Brassica napus HOM05D007124 ORTHO05D008980 1.4e-20 102.4 64 73.4
C02p16400 Brassica napus HOM05D007124 ORTHO05D008980 1.4e-20 102.4 64 73.4
BolC2t07742H Brassica oleracea HOM05D007124 ORTHO05D008980 1.4e-20 102.4 64 73.4
BraA02t06051Z Brassica rapa HOM05D007124 ORTHO05D008980 1.4e-20 102.4 64 73.4
AUR62008759 Chenopodium quinoa HOM05D007124 ORTHO05D008980 1.4e-20 102.4 70 75.7
AUR62025479 Chenopodium quinoa HOM05D007124 ORTHO05D008980 1.4e-20 102.4 70 75.7
Prupe.4G220900 Prunus persica HOM05D007124 ORTHO05D008980 1.4e-20 102.4 68 72.1
Sabra16G0198600 Salix brachista HOM05D007124 ORTHO05D008980 1.4e-20 102.4 68 72.1
Lalb_Chr15g0089611 Lupinus albus HOM05D007124 ORTHO05D008980 1.8e-20 102.1 67 70.1
QL08p007019 Quercus lobata HOM05D007124 ORTHO05D008980 1.8e-20 102.1 68 73.5
CANSAT11G2294 Cannabis sativa HOM05D007124 ORTHO05D008980 2.4e-20 101.7 69 69.6
arahy.Tifrunner.gnm1.ann1.902QMU Arachis hypogaea HOM05D007124 ORTHO05D008980 3.1e-20 101.3 64 73.4
BcaB08g35876 Brassica carinata HOM05D007124 ORTHO05D008980 3.1e-20 101.3 64 71.9
Cfa020296 Carpinus fangiana HOM05D007124 ORTHO05D008980 3.1e-20 101.3 64 73.4
Psat0s3039g0080 Pisum sativum HOM05D007124 ORTHO05D008980 3.1e-20 101.3 67 71.6
vmacro13375 Vaccinium macrocarpon HOM05D007124 ORTHO05D008980 3.1e-20 101.3 67 74.6
Glyma.10G051000 Glycine max HOM05D007124 ORTHO05D008980 5.2e-20 100.5 67 70.1
arahy.Tifrunner.gnm1.ann1.E6QS8A Arachis hypogaea HOM05D007124 ORTHO05D008980 6.9e-20 100.1 64 71.9
BcaC04g20268 Brassica carinata HOM05D007124 ORTHO05D008980 6.9e-20 100.1 68 69.1
BolC9t57437H Brassica oleracea HOM05D007124 ORTHO05D008980 6.9e-20 100.1 68 69.1
Haze_09723 Corylus avellana HOM05D007124 ORTHO05D008980 6.9e-20 100.1 65 73.8
Glyma.13G138500 Glycine max HOM05D007124 ORTHO05D008980 6.9e-20 100.1 67 70.1
Glyma.13G152338 Glycine max HOM05D007124 ORTHO05D008980 6.9e-20 100.1 67 70.1
Lj6g0008322 Lotus japonicus HOM05D007124 ORTHO05D008980 6.9e-20 100.1 64 71.9
SHI10538 Sapria himalayana HOM05D007124 ORTHO05D008980 6.9e-20 100.1 67 70.1
Psat1g201480 Pisum sativum HOM05D007124 ORTHO05D008980 8.9e-20 99.8 67 70.1
Solyc11g068490.1 Solanum lycopersicum HOM05D007124 ORTHO05D008980 8.9e-20 99.8 56 85.7
Aa31LG3G11120 Aethionema arabicum HOM05D007124 ORTHO05D008980 1.2e-19 99.4 68 69.1
Phvul.006G180400 Phaseolus vulgaris HOM05D007124 ORTHO05D008980 1.2e-19 99.4 67 68.7
HPP92_015305 Vanilla planifolia HOM05D007124 ORTHO05D008980 1.2e-19 99.4 67 68.7
Ca_00376_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 1.5e-19 99.0 64 70.3
Ca_00400_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 1.5e-19 99.0 64 70.3
CARHR268480 Cardamine hirsuta HOM05D007124 ORTHO05D008980 2.0e-19 98.6 68 69.1
Thhalv10015372m.g Eutrema salsugineum HOM05D007124 ORTHO05D008980 2.0e-19 98.6 68 69.1
HanXRQChr08g0233551 Helianthus annuus HOM05D007124 ORTHO05D008980 3.4e-19 97.8 60 76.7
Cc05_g14150 Coffea canephora HOM05D007124 ORTHO05D008980 5.8e-19 97.1 68 66.2
MELO3C004505.2 Cucumis melo HOM05D007124 ORTHO05D008980 4.9e-18 94.0 64 68.8
ECA246G4235 Erigeron canadensis HOM05D007124 ORTHO05D008980 1.9e-17 92.0 50 84.0
CsaV3_2G002880 Cucumis sativus L. HOM05D007124 ORTHO05D008980 3.2e-17 91.3 67 62.7
Glyma.10G069200 Glycine max HOM05D007124 ORTHO05D008980 5.4e-17 90.5 67 65.7
MD03G1195200 Malus domestica HOM05D007124 ORTHO05D008980 1.3e-15 85.9 59 69.5
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 1.7e-15 85.5 51 76.5
BcaB05g22183 Brassica carinata HOM05D007124 ORTHO05D008980 1.6e-13 79.0 56 66.1
Mapoly0141s0007 Marchantia polymorpha HOM05D007124 ORTHO05D008980 3.0e-07 58.2 63 41.3
unitig_0.g1624 Utricularia gibba HOM05D007124 ORTHO05D008980 3.9e-07 57.8 45 57.8
MD11G1211600 Malus domestica HOM05D007124 ORTHO05D008980 1.1e-06 56.2 37 67.6


User provided reference genes

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