Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 0.0e+00 1661.7 851 100.0
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 5.7e-249 864.8 786 60.4
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 7.9e-243 844.3 788 58.9
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 3.3e-241 839.0 787 57.2
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 5.9e-238 828.2 802 56.9
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.0e-237 827.4 788 57.4
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 2.9e-237 825.9 787 57.7
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.9e-236 823.2 786 57.1
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 4.2e-236 822.0 782 58.1
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.6e-235 820.1 815 55.5
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 4.7e-235 818.5 857 54.6
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 7.4e-233 811.2 806 55.5
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 9.7e-233 810.8 843 54.6
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.3e-232 808.1 773 57.3
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 5.3e-231 805.1 776 56.8
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 7.0e-231 804.7 790 55.9
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 2.6e-230 802.7 785 56.8
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 4.5e-230 802.0 790 56.1
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.2e-228 795.8 795 55.1
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 9.4e-228 794.3 776 55.3
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.1e-227 793.1 785 55.3
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.5e-225 786.9 789 55.8
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.5e-225 786.9 793 54.5
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 2.0e-225 786.6 787 54.9
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.0e-225 786.6 794 54.3
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 7.4e-225 784.6 812 53.8
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 8.2e-224 781.2 773 56.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 7.0e-223 778.1 783 55.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.2e-222 777.3 789 55.5
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 4.5e-222 775.4 779 54.3
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 2.9e-221 772.7 762 55.8
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.1e-220 770.8 769 55.1
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.6e-219 766.9 778 54.9
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.8e-218 763.5 751 56.9
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 3.0e-218 762.7 785 53.6
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 8.8e-218 761.1 864 51.6
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 5.7e-217 758.4 789 54.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.3e-216 757.3 776 53.1
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.8e-216 756.1 778 54.5
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 4.8e-216 755.4 771 53.4
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 9.1e-215 751.1 759 54.4
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 3.5e-214 749.2 830 51.3
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.7e-213 746.9 786 53.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 6.5e-213 745.0 784 52.3
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 6.5e-213 745.0 759 54.3
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 8.5e-213 744.6 781 54.0
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.1e-212 744.2 753 54.8
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.5e-212 743.8 792 53.4
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 9.4e-212 741.1 718 56.5
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.3e-210 736.5 669 59.9
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 5.2e-210 735.3 785 53.4
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 8.8e-210 734.6 843 52.0
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 6.3e-208 728.4 796 51.6
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.7e-205 720.3 751 53.4
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 2.9e-205 719.5 814 51.4
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 2.9e-205 719.5 836 48.4
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 6.6e-205 718.4 844 49.1
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.5e-204 717.2 845 48.0
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.9e-204 716.8 845 48.0
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.1e-203 713.4 842 49.5
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.1e-203 713.4 791 53.2
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 4.7e-203 712.2 758 54.5
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 4.7e-203 712.2 786 51.4
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 4.7e-203 712.2 845 47.7
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 4.7e-203 712.2 845 48.3
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.8e-202 710.3 842 49.5
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 3.0e-202 709.5 846 49.5
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 5.2e-202 708.8 822 50.0
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 6.8e-202 708.4 844 49.2
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 3.4e-201 706.1 801 50.1
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.3e-200 704.1 847 47.8
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.3e-200 704.1 750 51.6
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 2.2e-200 703.4 750 53.3
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 1.8e-199 700.3 830 48.3
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.2e-198 697.6 840 48.0
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.6e-198 697.2 783 49.7
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 2.9e-197 693.0 793 50.8
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.0e-193 680.2 798 49.5
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.4e-193 679.1 777 49.5
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.2e-190 671.0 813 50.9
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 7.8e-190 668.3 799 49.3
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 8.6e-189 664.8 778 47.7
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.8e-186 657.1 781 50.4
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 4.0e-186 656.0 751 51.4
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.7e-176 624.0 715 48.5
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.7e-176 622.9 783 46.1
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.8e-171 606.7 694 51.3
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.9e-168 596.7 670 52.7
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.9e-152 543.5 452 63.5
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 4.6e-150 536.2 481 59.5
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 3.7e-147 526.6 594 51.0
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.2e-147 525.8 586 51.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 5.3e-146 522.7 469 59.1
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 2.6e-145 520.4 478 57.7
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 3.2e-143 513.5 471 58.6
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 7.1e-143 512.3 596 48.7
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.6e-139 501.1 468 58.3
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 6.7e-133 479.2 777 42.5
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.8e-130 471.1 577 48.2
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 2.3e-125 454.1 843 35.6
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 3.9e-117 426.8 636 42.6
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 3.8e-112 410.2 867 35.9
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.0e-93 349.0 845 32.5
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 3.6e-86 323.9 545 37.8
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 9.8e-84 315.8 627 33.8
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.6e-72 276.6 280 53.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.2e-67 261.5 234 59.8
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 4.9e-67 260.4 241 57.7
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 4.1e-66 257.3 202 64.9
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.5e-63 248.1 858 28.0
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.0e-61 240.7 195 61.0
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 3.1e-53 214.5 206 56.3
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 5.2e-53 213.8 211 55.9
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.8e-19 101.3 146 43.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 3.7e-14 84.7 103 48.5
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 6.3e-14 84.0 96 49.0
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 2.2e-11 75.5 66 57.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 8.5e-11 73.6 143 34.3
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.5e-10 72.0 129 36.4
ECA240G1335 Erigeron canadensis HOM05D001865 ORTHO05D001815 8.2e-06 57.0 234 27.8
SMO364G0541 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 8.2e-06 57.0 169 24.9


User provided reference genes

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