Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G059 Amborella trichopoda HOM05D000641 ORTHO05D009503 8.6e-111 403.7 205 100.0
TAR375G0077 Trochodendron aralioides HOM05D000641 ORTHO05D009503 1.8e-15 87.0 194 38.7
Cfa008148 Carpinus fangiana HOM05D000641 ORTHO05D009503 8.8e-15 84.7 198 38.9
Haze_13894 Corylus avellana HOM05D000641 ORTHO05D009503 4.4e-14 82.4 198 38.9
Dinv06573 Davidia involucrata HOM05D000641 ORTHO05D009503 1.3e-13 80.9 186 37.1
Psat5g228240 Pisum sativum HOM05D000641 ORTHO05D009503 8.3e-13 78.2 199 33.2
TPR.G12185 Trifolium pratense HOM05D000641 ORTHO05D009503 3.1e-12 76.3 200 34.5
Peaxi162Scf00167g00069 Petunia axillaris HOM05D000641 ORTHO05D009503 2.7e-11 73.2 209 34.9
Nitab4.5_0003647g0030 Nicotiana tabacum HOM05D000641 ORTHO05D009503 5.9e-11 72.0 202 35.1
Gohir.A07G042000 Gossypium hirsutum HOM05D000641 ORTHO05D009503 1.0e-10 71.2 194 35.6
Thecc.03G153400 Theobroma cacao HOM05D000641 ORTHO05D009503 1.7e-10 70.5 199 34.7
Gorai.001G049400 Gossypium raimondii HOM05D000641 ORTHO05D009503 3.8e-10 69.3 198 35.9
Duzib068G1481 Durio zibethinus HOM05D000641 ORTHO05D009503 5.0e-10 68.9 197 34.5
QL09p005284 Quercus lobata HOM05D000641 ORTHO05D009503 1.1e-09 67.8 100 45.0
Medtr3g408360 Medicago truncatula HOM05D000641 ORTHO05D009503 2.5e-09 66.6 151 32.5
Actinidia24993 Actinidia chinensis HOM05D000641 ORTHO05D009503 3.3e-09 66.2 180 32.8
TWI39G0625 Tripterygium wilfordii HOM05D000641 ORTHO05D009503 3.3e-09 66.2 151 37.7
Manes.06G133400 Manihot esculenta HOM05D000641 ORTHO05D009503 4.3e-09 65.9 199 32.7
Lj3g0012958 Lotus japonicus HOM05D000641 ORTHO05D009503 7.3e-09 65.1 198 32.3
PGSC0003DMG400007216 Solanum tuberosum HOM05D000641 ORTHO05D009503 2.1e-08 63.5 99 41.4
Glyma.06G318000 Glycine max HOM05D000641 ORTHO05D009503 2.8e-08 63.2 219 32.4
Sabra01G0097000 Salix brachista HOM05D000641 ORTHO05D009503 3.6e-08 62.8 109 37.6
Potri.001G126000 Populus trichocarpa HOM05D000641 ORTHO05D009503 4.7e-08 62.4 111 37.8
CANSAT56G1736 Cannabis sativa HOM05D000641 ORTHO05D009503 6.1e-08 62.0 113 40.7
CiPaw.04G013400 Carya illinoinensis HOM05D000641 ORTHO05D009503 6.1e-08 62.0 202 32.7
Sopen05g030110 Solanum pennellii HOM05D000641 ORTHO05D009503 6.1e-08 62.0 96 42.7
CANSAT56G4329 Cannabis sativa HOM05D000641 ORTHO05D009503 8.0e-08 61.6 113 40.7
Lalb_Chr18g0048911 Lupinus albus HOM05D000641 ORTHO05D009503 8.0e-08 61.6 165 33.3
ClCG09G013070 Citrullus lanatus HOM05D000641 ORTHO05D009503 1.0e-07 61.2 211 30.3
HanXRQChr16g0512821 Helianthus annuus HOM05D000641 ORTHO05D009503 1.0e-07 61.2 176 33.0
CsaV3_3G050080 Cucumis sativus L. HOM05D000641 ORTHO05D009503 1.8e-07 60.5 196 31.6
ECA232G0602 Erigeron canadensis HOM05D000641 ORTHO05D009503 1.8e-07 60.5 92 41.3
Ca_14101_v3 Cicer arietinum L. HOM05D000641 ORTHO05D009503 3.0e-07 59.7 203 29.6
FAN10G0113 Fragaria x ananassa HOM05D000641 ORTHO05D009503 4.0e-07 59.3 187 34.2
MELO3C003310.2 Cucumis melo HOM05D000641 ORTHO05D009503 6.8e-07 58.5 203 29.6
Lsat_1_v5_gn_9_51881 Lactuca sativa HOM05D000641 ORTHO05D009503 6.8e-07 58.5 193 30.6
arahy.Tifrunner.gnm1.ann1.W6IUV8 Arachis hypogaea HOM05D000641 ORTHO05D009503 8.9e-07 58.2 93 36.6
Phvul.005G008600 Phaseolus vulgaris HOM05D000641 ORTHO05D009503 8.9e-07 58.2 217 28.6
FAN01G2651 Fragaria x ananassa HOM05D000641 ORTHO05D009503 1.2e-06 57.8 150 33.3
FAN03G1792 Fragaria x ananassa HOM05D000641 ORTHO05D009503 1.2e-06 57.8 141 36.2
VMungo1080G1510 Vigna mungo HOM05D000641 ORTHO05D009503 1.5e-06 57.4 218 31.2
arahy.Tifrunner.gnm1.ann1.20MRK9 Arachis hypogaea HOM05D000641 ORTHO05D009503 2.0e-06 57.0 92 33.7
Lj8A43T54 Lonicera japonica HOM05D000641 ORTHO05D009503 2.0e-06 57.0 156 35.3
Cpa.g.sc13.292 Carica papaya HOM05D000641 ORTHO05D009503 2.6e-06 56.6 115 37.4
arahy.Tifrunner.gnm1.ann1.S24B42 Arachis hypogaea HOM05D000641 ORTHO05D009503 3.4e-06 56.2 108 35.2
arahy.Tifrunner.gnm1.ann1.YH4NKV Arachis hypogaea HOM05D000641 ORTHO05D009503 3.4e-06 56.2 92 34.8
Prupe.2G275600 Prunus persica HOM05D000641 ORTHO05D009503 7.5e-06 55.1 94 40.4
arahy.Tifrunner.gnm1.ann1.TAG6ZD Arachis hypogaea HOM05D000641 ORTHO05D009503 9.8e-06 54.7 108 35.2
CAN.G937.2 Capsicum annuum HOM05D000641 ORTHO05D009503 9.8e-06 54.7 101 38.6
Eucgr.K00166 Eucalyptus grandis HOM05D000641 ORTHO05D009503 9.8e-06 54.7 199 30.7
Gohir.D07G046200 Gossypium hirsutum HOM05D000641 ORTHO05D009503 9.8e-06 54.7 156 35.9


User provided reference genes

Program Settings