Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 1.9e-205 719.2 411 100.0
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 8.7e-54 215.3 299 47.8
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 1.9e-53 214.2 335 48.4
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 4.3e-53 213.0 320 45.9
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 1.3e-52 211.5 313 48.2
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.6e-52 211.1 359 47.1
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 1.6e-52 211.1 323 45.8
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 1.4e-51 208.0 327 48.0
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.8e-51 207.6 355 47.0
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 4.5e-50 203.0 323 46.7
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 1.0e-49 201.8 298 46.3
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 1.7e-49 201.1 328 43.6
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 4.9e-49 199.5 319 45.8
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.4e-48 198.0 327 45.6
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 3.2e-48 196.8 347 44.7
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 4.2e-48 196.4 342 43.9
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 5.5e-48 196.1 326 46.0
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.6e-47 194.5 344 43.9
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 4.6e-47 193.0 320 45.6
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 1.3e-46 191.4 341 44.6
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.8e-46 191.0 324 43.2
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 3.0e-46 190.3 347 46.7
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.5e-45 188.0 330 43.3
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.9e-45 187.6 321 46.1
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 3.3e-45 186.8 335 42.1
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 9.6e-45 185.3 331 44.7
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 1.6e-44 184.5 318 42.1
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 3.7e-44 183.3 313 42.8
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 3.7e-44 183.3 346 41.3
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 8.2e-44 182.2 314 51.0
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 8.2e-44 182.2 314 51.0
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 1.4e-43 181.4 340 42.1
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.4e-43 181.4 313 51.1
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 2.4e-43 180.6 337 46.6
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.5e-42 177.9 323 42.4
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 1.5e-42 177.9 326 46.9
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.6e-42 177.2 334 43.1
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 3.4e-42 176.8 292 43.2
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 5.9e-42 176.0 331 42.9
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 7.6e-42 175.6 362 43.4
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 2.2e-41 174.1 334 39.5
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 2.9e-41 173.7 331 42.6
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 3.8e-41 173.3 338 41.1
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 5.0e-41 172.9 322 42.2
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 6.5e-41 172.6 344 42.2
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.4e-40 171.4 303 48.5
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 1.9e-40 171.0 323 44.0
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 1.9e-40 171.0 331 42.0
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 3.2e-40 170.2 342 41.5
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 4.2e-40 169.9 323 43.0
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 9.3e-40 168.7 340 48.5
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 9.3e-40 168.7 332 39.8
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 1.6e-39 167.9 362 39.8
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 2.1e-39 167.5 349 38.4
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 2.1e-39 167.5 339 40.1
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.7e-39 167.2 328 40.2
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 4.6e-39 166.4 336 42.9
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 6.1e-39 166.0 321 41.7
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.3e-38 164.9 323 45.2
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.3e-38 164.9 125 68.8
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 1.8e-38 164.5 318 38.4
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.8e-38 164.5 336 42.6
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 1.1e-37 161.8 326 39.3
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 1.9e-37 161.0 295 41.4
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 1.9e-37 161.0 338 47.0
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 2.5e-37 160.6 349 41.0
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 1.6e-36 157.9 326 38.7
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 2.8e-36 157.1 314 39.5
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 8.2e-36 155.6 337 39.2
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 3.1e-35 153.7 320 43.4
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 4.1e-35 153.3 339 36.6
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 5.3e-35 152.9 361 39.1
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 1.5e-34 151.4 326 37.7
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 2.0e-34 151.0 349 36.4
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 2.0e-34 151.0 326 38.3
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 2.6e-34 150.6 340 39.7
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 3.4e-34 150.2 267 41.2
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 4.5e-34 149.8 361 37.1
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 5.9e-34 149.4 324 43.5
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 7.7e-34 149.1 326 42.0
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 1.3e-33 148.3 334 40.7
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.7e-33 147.9 316 39.2
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 2.9e-33 147.1 250 41.6
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 1.1e-32 145.2 174 58.6
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.4e-32 144.8 340 38.8
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 1.9e-32 144.4 337 40.1
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 3.6e-31 140.2 303 38.6
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 7.9e-31 139.0 381 36.0
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.8e-30 137.9 334 35.6
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.8e-30 137.9 322 39.8
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 5.7e-29 132.9 379 36.7
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 1.7e-28 131.3 338 40.2
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 1.7e-28 131.3 334 35.6
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 4.8e-28 129.8 319 37.0
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 1.4e-27 128.3 319 34.8
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 4.1e-27 126.7 371 38.5
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 4.5e-26 123.2 317 37.2
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 1.7e-25 121.3 249 40.6
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 1.9e-24 117.9 338 35.5
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 2.5e-24 117.5 345 33.6
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 4.2e-24 116.7 352 33.8
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 1.2e-23 115.2 125 56.8
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.6e-23 114.8 329 35.6
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 2.1e-23 114.4 351 33.0
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 7.9e-23 112.5 333 34.5
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 1.4e-22 111.7 340 32.6
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 5.1e-22 109.8 329 33.7
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 3.3e-21 107.1 327 34.6
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 2.8e-20 104.0 313 35.8
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 6.3e-20 102.8 329 34.0
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 5.9e-18 96.3 339 33.6
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 2.2e-17 94.4 136 46.3
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 3.8e-17 93.6 252 41.7
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 5.0e-17 93.2 323 32.5
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 1.9e-16 91.3 328 31.7
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 1.9e-16 91.3 324 31.5
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 5.5e-16 89.7 291 31.3
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 5.5e-16 89.7 147 43.5
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 5.5e-16 89.7 363 31.4
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 1.2e-15 88.6 152 43.4
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.6e-15 88.2 236 34.7
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 3.6e-15 87.0 48 75.0
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 3.0e-14 84.0 177 38.4
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 4.0e-14 83.6 340 35.0
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 6.3e-12 76.3 326 31.3
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 6.3e-12 76.3 326 31.3
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 6.3e-12 76.3 211 31.8
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.8e-11 74.7 137 43.1
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 1.2e-07 62.0 171 30.4


User provided reference genes

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