Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 0.0e+00 2394.8 1202 100.0
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 9.4e-32 143.7 1290 24.8
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 4.0e-22 111.7 1294 23.0
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.0e-17 97.1 176 36.9
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 2.3e-17 95.9 156 34.0
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 2.9e-17 95.5 149 34.2
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 3.8e-17 95.1 1279 22.4
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 2.8e-15 89.0 81 46.9
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 2.8e-15 89.0 145 36.6
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 6.1e-15 87.8 159 37.1
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.1e-15 87.8 149 32.9
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 1.0e-14 87.0 149 32.9
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 4.0e-14 85.1 119 36.1
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 4.0e-14 85.1 63 50.8
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.2e-14 84.7 166 33.1
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.8e-14 84.3 149 32.2
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 8.8e-14 84.0 212 29.2
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 8.8e-14 84.0 158 34.2
TAR626G0792 Trochodendron aralioides HOM05D004021 ORTHO05D003767 8.8e-14 84.0 595 26.4
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.5e-13 83.2 174 27.0
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 1.5e-13 83.2 79 43.0
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.6e-13 82.4 227 28.6
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.4e-13 82.0 157 31.2
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 4.4e-13 81.6 166 32.5
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 5.7e-13 81.3 103 35.9
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 5.7e-13 81.3 149 31.5
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 9.8e-13 80.5 155 31.0
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 9.8e-13 80.5 150 35.3
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 1.3e-12 80.1 188 27.7
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.7e-12 79.7 188 31.9
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 2.2e-12 79.3 132 32.6
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 2.8e-12 79.0 68 50.0
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.7e-12 78.6 104 38.5
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 6.3e-12 77.8 80 42.5
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 6.3e-12 77.8 106 39.6
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 1.1e-11 77.0 75 42.7
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.1e-11 77.0 78 39.7
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.8e-11 76.3 71 47.9
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 2.4e-11 75.9 134 35.1
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 2.4e-11 75.9 64 51.6
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 3.1e-11 75.5 72 48.6
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.1e-11 75.5 165 31.5
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 5.4e-11 74.7 74 45.9
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 7.0e-11 74.3 78 38.5
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 9.2e-11 73.9 163 35.0
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 9.2e-11 73.9 163 35.0
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 9.2e-11 73.9 62 50.0
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 9.2e-11 73.9 100 39.0
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 9.2e-11 73.9 80 41.2
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 1.2e-10 73.6 369 26.3
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 1.2e-10 73.6 62 50.0
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.2e-10 73.6 78 38.5
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 1.2e-10 73.6 56 51.8
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.6e-10 73.2 170 28.8
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 2.0e-10 72.8 72 41.7
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 2.0e-10 72.8 147 29.3
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 2.0e-10 72.8 173 27.2
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 2.7e-10 72.4 104 36.5
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.7e-10 72.4 61 50.8
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 2.7e-10 72.4 71 45.1
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 3.5e-10 72.0 140 31.4
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 4.5e-10 71.6 163 34.4
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 4.5e-10 71.6 142 33.8
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 5.9e-10 71.2 183 32.8
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.0e-09 70.5 68 41.2
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 1.0e-09 70.5 58 51.7
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.0e-09 70.5 61 49.2
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 1.7e-09 69.7 163 30.7
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.7e-09 69.7 56 50.0
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.9e-09 68.9 59 47.5
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 3.8e-09 68.6 118 33.1
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 5.0e-09 68.2 73 43.8
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 6.6e-09 67.8 128 32.0
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 6.6e-09 67.8 174 30.5
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 8.6e-09 67.4 650 21.4
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 8.6e-09 67.4 128 32.0
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 8.6e-09 67.4 58 46.6
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 8.6e-09 67.4 97 34.0
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 1.1e-08 67.0 86 41.9
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 1.1e-08 67.0 86 41.9
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 1.1e-08 67.0 188 27.7
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 1.1e-08 67.0 59 50.8
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 1.5e-08 66.6 69 44.9
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 1.5e-08 66.6 57 52.6
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.5e-08 66.6 55 52.7
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.9e-08 66.2 67 43.3
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 1.9e-08 66.2 63 42.9
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 1.9e-08 66.2 60 46.7
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 1.9e-08 66.2 164 31.7
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 2.5e-08 65.9 91 35.2
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 4.3e-08 65.1 56 51.8
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 4.3e-08 65.1 63 41.3
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 5.6e-08 64.7 66 42.4
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 5.6e-08 64.7 59 47.5
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 7.3e-08 64.3 71 46.5
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 9.5e-08 63.9 874 22.9
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 9.5e-08 63.9 76 42.1
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 1.2e-07 63.5 55 49.1
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 1.2e-07 63.5 70 42.9
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 1.6e-07 63.2 57 52.6
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 1.6e-07 63.2 55 49.1
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 1.6e-07 63.2 80 43.8
ClCG11G015210 Citrullus lanatus HOM05D004021 ORTHO05D003767 2.1e-07 62.8 640 23.3
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 2.1e-07 62.8 57 42.1
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 2.1e-07 62.8 70 42.9
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 2.8e-07 62.4 77 44.2
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 3.6e-07 62.0 58 46.6
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 3.6e-07 62.0 58 44.8
PSO782G1327 Papaver somniferum HOM05D004021 ORTHO05D003767 4.7e-07 61.6 990 22.0
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 4.7e-07 61.6 55 45.5
SEGI_32539 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 6.1e-07 61.2 98 32.7
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 8.0e-07 60.8 60 43.3
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 8.0e-07 60.8 94 31.9
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 8.0e-07 60.8 67 43.3
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.4e-06 60.1 1121 21.5
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 1.4e-06 60.1 198 28.3
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 1.4e-06 60.1 57 47.4
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 2.3e-06 59.3 88 33.0
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.0e-06 58.9 57 47.4
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 5.2e-06 58.2 953 21.0
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 5.2e-06 58.2 204 26.0
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 5.2e-06 58.2 54 42.6


User provided reference genes

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