Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 0.0e+00 1936.4 959 100.0
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 1.3e-305 1053.1 985 56.1
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 7.0e-296 1020.8 984 53.8
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 4.7e-292 1008.1 976 52.3
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 1.1e-290 1003.4 987 52.9
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 1.1e-288 996.9 956 53.5
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 2.4e-288 995.7 982 51.8
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 3.8e-286 988.4 954 53.6
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 4.2e-285 984.9 975 51.8
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 5.5e-285 984.6 978 51.5
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 2.0e-282 976.1 957 52.1
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 2.0e-282 976.1 974 52.0
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 1.4e-280 969.9 986 50.7
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 3.1e-280 968.8 963 52.4
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 2.0e-279 966.1 973 52.1
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 2.7e-279 965.7 987 50.9
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 2.7e-279 965.7 974 50.9
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 3.5e-279 965.3 973 52.1
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 1.0e-278 963.8 981 51.2
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 1.3e-278 963.4 991 50.1
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.2e-278 962.6 990 50.0
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.9e-278 962.2 985 50.4
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 5.0e-278 961.4 1013 49.5
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 2.0e-274 949.5 849 56.5
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 2.0e-274 949.5 974 50.1
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 7.5e-274 947.6 1020 48.3
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 1.2e-271 940.3 947 49.7
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 3.8e-270 935.3 971 49.2
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 1.5e-269 933.3 970 50.3
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 2.8e-268 929.1 940 49.8
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 8.0e-268 927.5 833 55.3
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 1.0e-267 927.2 943 50.3
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 1.8e-264 916.4 828 55.9
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 5.4e-264 914.8 953 50.1
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 5.0e-262 908.3 978 49.2
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 6.6e-262 907.9 979 47.7
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 1.1e-261 907.1 958 49.3
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 4.3e-261 905.2 846 54.0
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 9.5e-261 904.0 829 54.4
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 4.7e-260 901.7 942 48.9
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 1.8e-259 899.8 982 47.4
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 4.4e-258 895.2 964 48.2
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 3.7e-257 892.1 985 47.5
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 8.3e-257 891.0 948 50.0
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 5.0e-254 881.7 956 48.6
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 4.3e-253 878.6 948 48.4
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 5.6e-253 878.2 946 48.9
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 2.1e-252 876.3 946 49.3
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 1.8e-251 873.2 865 52.8
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 2.6e-250 869.4 941 47.3
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 7.5e-250 867.8 946 48.0
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 2.4e-248 862.8 959 47.4
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 9.2e-248 860.9 807 54.2
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 1.6e-247 860.1 943 48.3
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 2.1e-247 859.8 982 47.6
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 4.6e-247 858.6 985 47.0
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 2.5e-245 852.8 986 46.9
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 9.5e-245 850.9 949 46.4
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 1.2e-244 850.5 957 46.7
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 3.6e-244 849.0 976 46.0
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 2.2e-241 839.7 943 47.0
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 2.4e-240 836.3 993 46.7
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 6.0e-239 831.6 911 48.0
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 1.0e-238 830.9 956 46.2
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 3.0e-238 829.3 959 45.9
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 1.1e-237 827.4 987 45.7
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 2.5e-237 826.2 823 50.3
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 1.2e-236 823.9 946 46.7
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 1.1e-235 820.8 960 46.6
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 2.4e-235 819.7 721 56.6
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 5.2e-235 818.5 945 46.5
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 9.9e-234 814.3 753 53.9
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 9.9e-234 814.3 949 45.2
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 2.1e-231 806.6 832 49.9
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 2.1e-231 806.6 832 49.9
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 4.6e-231 805.4 980 44.9
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 6.0e-231 805.1 980 44.7
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 6.0e-231 805.1 980 44.6
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 9.0e-227 791.2 864 48.0
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 8.4e-225 784.6 947 44.8
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 8.7e-222 774.6 934 44.5
Gohir.A05G070000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 4.0e-219 765.8 756 52.2
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 2.6e-210 736.5 979 43.0
Glyma.11G094500 Glycine max HOM05D006404 ORTHO05D008170 1.3e-209 734.2 731 50.9
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 7.6e-202 708.4 952 41.9
Gohir.A09G112300 Gossypium hirsutum HOM05D006404 ORTHO05D008170 7.9e-191 671.8 635 54.6
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 8.8e-190 668.3 865 41.0
Duzib168G1842 Durio zibethinus HOM05D006404 ORTHO05D008170 1.1e-189 667.9 645 52.2
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 1.0e-185 654.8 826 43.8
Os01g0275900 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 3.5e-170 603.2 586 52.2
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 6.1e-167 592.4 932 39.1
Phvul.002G034601 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 5.9e-162 575.9 655 46.1
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 1.7e-156 557.8 552 51.6
CSS0019486 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 5.2e-142 509.6 500 52.8
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 1.4e-131 474.9 601 44.3
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 3.3e-128 463.8 925 32.1
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.2e-127 461.8 472 50.2
Gohir.D05G073000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 3.1e-126 457.2 448 52.0
unitig_27.g25000 Utricularia gibba HOM05D006404 ORTHO05D008170 8.1e-119 432.6 520 45.0
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.1e-102 379.0 433 45.3
Glyma.11G015367 Glycine max HOM05D006404 ORTHO05D008170 5.3e-102 376.7 379 49.3
HPP92_028182 Vanilla planifolia HOM05D006404 ORTHO05D008170 4.1e-86 323.9 312 52.6
Gohir.A09G112350 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.9e-67 261.9 315 45.7
Os01g0275950 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 1.7e-63 248.8 308 43.8
TAR633G2510 Trochodendron aralioides HOM05D006404 ORTHO05D008170 2.8e-55 221.5 312 42.9
Duzib168G1560 Durio zibethinus HOM05D006404 ORTHO05D008170 4.8e-55 220.7 279 44.4
unitig_27.g24999 Utricularia gibba HOM05D006404 ORTHO05D008170 8.5e-52 209.9 300 38.3
MBI19_g48146_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 3.0e-49 201.4 310 39.4
PGSC0003DMG400035426 Solanum tuberosum HOM05D006404 ORTHO05D008170 1.2e-42 179.5 159 56.6
Lsat_1_v5_gn_5_69941 Lactuca sativa HOM05D006404 ORTHO05D008170 1.1e-30 139.8 154 49.4
Lsat_1_v5_gn_8_47480 Lactuca sativa HOM05D006404 ORTHO05D008170 5.4e-30 137.5 154 48.1
Lsat_1_v5_gn_4_119980 Lactuca sativa HOM05D006404 ORTHO05D008170 5.0e-28 131.0 132 50.8
Atru.chr3.2650 Acer truncatum HOM05D006404 ORTHO05D008170 6.6e-28 130.6 105 60.0
PRCOL_00003209 Prasinoderma coloniale HOM05D006404 ORTHO05D008170 5.4e-22 110.9 941 21.9
HPP92_012439 Vanilla planifolia HOM05D006404 ORTHO05D008170 7.5e-16 90.5 200 32.0
MELO3C030880.2 Cucumis melo HOM05D006404 ORTHO05D008170 2.1e-10 72.4 82 40.2
PGSC0003DMG400025695 Solanum tuberosum HOM05D006404 ORTHO05D008170 1.4e-09 69.7 89 40.4
Thecc.01G390500 Theobroma cacao HOM05D006404 ORTHO05D008170 5.2e-09 67.8 112 34.8
MELO3C034469.2 Cucumis melo HOM05D006404 ORTHO05D003726 1.5e-08 66.2 61 44.3
MELO3C034790.2 Cucumis melo HOM05D006404 ORTHO05D008170 3.4e-08 65.1 57 43.9
Atru.chr3.2651 Acer truncatum HOM05D006404 ORTHO05D008170 3.8e-07 61.6 71 36.6


User provided reference genes

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