Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.3e-139 499.6 238 100.0
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 5.2e-75 285.0 182 74.2
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.1e-72 275.4 192 67.7
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 3.6e-68 262.3 188 64.4
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 2.3e-67 259.6 196 61.7
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 4.0e-67 258.8 203 61.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.5e-66 256.9 176 65.9
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.0e-66 256.5 183 66.7
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 2.2e-65 253.1 193 63.2
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 3.7e-65 252.3 200 57.5
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 1.4e-64 250.4 196 58.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 4.1e-64 248.8 199 60.3
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.2e-63 247.3 194 57.7
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 2.0e-63 246.5 192 57.8
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 2.7e-63 246.1 181 63.0
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 4.5e-63 245.4 191 61.3
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.3e-62 243.0 177 61.0
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 2.3e-62 243.0 192 60.4
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 2.9e-62 242.7 178 61.8
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 5.0e-62 241.9 215 54.4
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 6.6e-62 241.5 191 57.1
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 6.6e-62 241.5 194 58.2
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.5e-61 240.4 215 54.9
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 1.5e-61 240.4 182 61.5
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.5e-61 240.4 197 60.4
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.9e-61 240.0 186 57.5
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 5.6e-61 238.4 224 53.1
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 5.6e-61 238.4 200 55.0
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 5.6e-61 238.4 229 51.1
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 7.3e-61 238.0 214 55.6
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 7.3e-61 238.0 209 53.1
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 9.5e-61 237.7 216 53.7
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.2e-60 237.3 194 58.8
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.2e-60 237.3 213 54.5
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.2e-60 237.3 185 57.8
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.2e-60 237.3 213 53.5
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.2e-60 237.3 188 59.6
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 1.6e-60 236.9 183 61.2
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.1e-60 236.5 174 60.3
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.8e-60 236.1 210 54.3
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 4.7e-60 235.3 212 52.4
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 8.0e-60 234.6 210 53.8
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.0e-59 234.2 198 55.1
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.4e-59 233.8 197 56.3
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.4e-59 233.8 198 55.1
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 1.4e-59 233.8 202 56.4
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.8e-59 233.4 204 54.9
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.8e-59 233.4 197 55.3
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 2.3e-59 233.0 204 54.9
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 2.3e-59 233.0 194 57.2
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.1e-59 232.6 200 55.0
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 3.1e-59 232.6 179 60.9
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 4.0e-59 232.3 186 59.7
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.0e-59 232.3 188 57.4
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 5.2e-59 231.9 192 54.7
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 8.9e-59 231.1 177 59.9
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 2.0e-58 229.9 195 57.4
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 3.4e-58 229.2 192 56.2
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 4.4e-58 228.8 194 56.2
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 5.8e-58 228.4 191 57.1
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.7e-57 226.9 199 56.8
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 2.2e-57 226.5 185 57.8
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 2.9e-57 226.1 201 53.7
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.7e-57 225.7 184 58.2
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 3.7e-57 225.7 201 53.7
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 3.7e-57 225.7 192 55.7
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.7e-57 225.7 194 55.2
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.7e-57 225.7 194 55.2
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 6.4e-57 224.9 196 54.1
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 8.3e-57 224.6 193 57.5
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.9e-56 223.4 186 55.9
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 2.4e-56 223.0 186 55.4
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 3.2e-56 222.6 190 55.8
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 3.2e-56 222.6 170 59.4
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 4.1e-56 222.2 188 55.3
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 6.0e-55 218.4 195 52.8
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 8.6e-54 214.5 132 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 7.3e-53 211.5 195 53.8
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 6.2e-52 208.4 209 50.2
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 8.9e-51 204.5 182 54.9
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.2e-50 204.1 187 54.0
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 6.4e-49 198.4 196 54.1
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.4e-48 196.4 197 51.3
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 7.8e-47 191.4 186 52.2
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 8.1e-44 181.4 182 48.9
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 2.3e-43 179.9 116 68.1
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.2e-39 167.5 124 61.3
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 4.9e-33 145.6 118 59.3
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 7.1e-32 141.7 124 56.5
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.3e-30 137.5 89 66.3
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 3.0e-30 136.3 119 56.3
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.2e-25 120.2 119 52.1
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.3e-22 110.9 163 38.0
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.2e-17 93.6 75 48.0
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 6.7e-14 82.0 54 59.3
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 9.6e-13 78.2 51 60.8
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 4.9e-09 65.9 59 54.2
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.2e-07 61.2 67 41.8
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 6.0e-07 58.9 82 39.0
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 2.3e-06 57.0 84 39.3


User provided reference genes

Program Settings