Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 1.1e-62 243.0 120 100.0
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 2.2e-29 132.5 105 57.1
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 1.1e-28 130.2 105 56.2
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 7.0e-28 127.5 116 51.7
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 1.6e-27 126.3 117 56.4
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 2.9e-26 122.1 98 58.2
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 1.5e-25 119.8 108 57.4
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 1.5e-25 119.8 106 52.8
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 4.2e-25 118.2 110 50.9
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 5.5e-25 117.9 103 55.3
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 7.2e-25 117.5 107 54.2
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 1.2e-24 116.7 117 49.6
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 2.7e-24 115.5 110 49.1
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 4.7e-24 114.8 113 48.7
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 4.7e-24 114.8 113 48.7
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 4.7e-24 114.8 113 48.7
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 6.1e-24 114.4 116 53.4
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 6.1e-24 114.4 109 52.3
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 6.1e-24 114.4 106 52.8
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 8.0e-24 114.0 116 51.7
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.0e-23 113.6 110 50.9
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 1.8e-23 112.8 105 51.4
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 2.3e-23 112.5 122 48.4
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 3.0e-23 112.1 105 54.3
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 3.0e-23 112.1 105 54.3
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 3.0e-23 112.1 105 51.4
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 3.0e-23 112.1 110 50.9
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 4.0e-23 111.7 111 50.5
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 4.0e-23 111.7 116 45.7
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 5.2e-23 111.3 104 51.9
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 5.2e-23 111.3 105 49.5
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 1.5e-22 109.8 101 50.5
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 1.5e-22 109.8 105 55.2
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 2.0e-22 109.4 107 50.5
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 2.0e-22 109.4 107 50.5
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 2.6e-22 109.0 117 47.9
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 3.3e-22 108.6 106 47.2
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 3.3e-22 108.6 105 51.4
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 4.4e-22 108.2 104 52.9
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 4.4e-22 108.2 104 52.9
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 5.7e-22 107.8 111 47.7
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 7.5e-22 107.5 110 47.3
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 9.7e-22 107.1 114 51.8
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.3e-21 106.7 112 50.9
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 1.3e-21 106.7 110 48.2
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.8e-21 105.5 112 50.9
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 3.7e-21 105.1 107 49.5
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 3.7e-21 105.1 103 47.6
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.4e-20 103.2 106 50.9
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 2.4e-20 102.4 109 45.0
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 3.1e-20 102.1 108 47.2
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 3.1e-20 102.1 133 45.1
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 4.1e-20 101.7 118 40.7
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 4.1e-20 101.7 103 48.5
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 4.1e-20 101.7 109 48.6
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 5.3e-20 101.3 110 50.0
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 5.3e-20 101.3 110 47.3
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 7.0e-20 100.9 110 48.2
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 1.6e-19 99.8 122 42.6
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 2.7e-19 99.0 98 51.0
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 3.5e-19 98.6 109 46.8
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 4.5e-19 98.2 109 45.0
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 5.9e-19 97.8 119 43.7
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 5.9e-19 97.8 105 44.8
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 7.7e-19 97.4 113 46.0
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 7.7e-19 97.4 116 44.0
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 7.7e-19 97.4 113 46.0
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 7.7e-19 97.4 105 47.6
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 1.7e-18 96.3 113 41.6
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 1.7e-18 96.3 114 46.5
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 2.2e-18 95.9 112 43.8
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 3.8e-18 95.1 114 43.0
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 5.0e-18 94.7 103 47.6
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 1.5e-17 93.2 104 41.3
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 2.5e-17 92.4 112 42.9
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 3.2e-17 92.0 117 41.9
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 3.2e-17 92.0 122 41.0
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 4.2e-17 91.7 118 40.7
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 4.2e-17 91.7 105 48.6
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 4.2e-17 91.7 104 46.2
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 9.4e-17 90.5 99 45.5
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 1.6e-16 89.7 116 41.4
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 2.7e-16 89.0 107 43.9
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 4.7e-16 88.2 113 42.5
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 2.3e-15 85.9 105 43.8
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 4.0e-15 85.1 109 41.3
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 6.8e-15 84.3 67 55.2
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 1.2e-14 83.6 64 57.8
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 2.0e-14 82.8 117 40.2
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 4.4e-14 81.6 77 48.1
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 4.4e-14 81.6 112 39.3
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 1.7e-13 79.7 88 43.2
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 3.1e-12 75.5 79 46.8
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 3.1e-12 75.5 78 47.4
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 4.1e-12 75.1 110 40.9
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 1.6e-11 73.2 101 38.6
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 2.7e-11 72.4 112 35.7
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 3.5e-11 72.0 79 45.6
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 5.9e-11 71.2 117 38.5
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 7.7e-11 70.9 79 43.0
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 2.3e-10 69.3 100 39.0
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 2.9e-10 68.9 94 41.5
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 2.9e-10 68.9 81 45.7
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 5.0e-10 68.2 80 41.2
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 5.0e-10 68.2 79 45.6
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 5.0e-10 68.2 79 45.6
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 8.6e-10 67.4 109 35.8
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 1.1e-09 67.0 143 35.0
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 2.5e-09 65.9 148 31.8
SalBow6G5897 Salvia bowleyana HOM05D007094 ORTHO05D008264 2.5e-09 65.9 57 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 7.2e-09 64.3 129 33.3
SEGI_08465 Sequoiadendron giganteum HOM05D007094 ORTHO05D008264 8.0e-08 60.8 69 42.0
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 1.4e-07 60.1 49 53.1
DCAR_029979 Daucus carota HOM05D007094 ORTHO05D008264 6.8e-07 57.8 60 43.3
Mapoly0029s0132 Marchantia polymorpha HOM05D001703 ORTHO05D005708 6.8e-07 57.8 124 32.3


User provided reference genes

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