Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.8e-282 974.2 483 100.0
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 3.4e-206 721.8 449 79.5
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 7.5e-206 720.7 448 79.9
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 3.7e-205 718.4 449 79.3
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 3.1e-204 715.3 480 75.6
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 5.4e-204 714.5 477 75.3
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 9.2e-204 713.8 454 78.2
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.6e-203 713.0 441 80.0
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 2.0e-203 712.6 442 79.0
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.0e-203 712.6 479 76.0
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 2.7e-203 712.2 440 80.0
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 3.5e-203 711.8 444 79.7
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 5.9e-203 711.1 477 75.3
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 5.9e-203 711.1 442 79.9
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.9e-203 711.1 444 80.0
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.0e-202 710.3 479 75.8
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.0e-202 710.3 444 79.5
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.0e-202 710.3 481 74.4
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 3.8e-202 708.4 441 78.9
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 5.0e-202 708.0 475 75.4
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 5.0e-202 708.0 479 75.6
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.0e-202 708.0 448 78.1
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 8.6e-202 707.2 470 75.7
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 8.6e-202 707.2 441 78.9
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 8.6e-202 707.2 480 74.4
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 8.6e-202 707.2 476 75.6
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.5e-201 706.4 444 78.8
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.9e-201 706.1 444 79.5
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.9e-201 706.1 439 79.3
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.9e-201 706.1 444 78.4
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 2.5e-201 705.7 484 74.6
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 2.5e-201 705.7 478 74.1
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 4.3e-201 704.9 478 74.5
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 5.6e-201 704.5 444 77.9
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 7.3e-201 704.1 445 79.1
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 7.3e-201 704.1 489 73.4
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 7.3e-201 704.1 473 74.8
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 9.5e-201 703.7 459 76.9
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-200 703.0 461 76.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.8e-200 702.2 482 73.7
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 4.7e-200 701.4 482 73.7
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 4.7e-200 701.4 481 74.2
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 4.7e-200 701.4 478 74.5
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 6.1e-200 701.0 453 77.3
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 6.1e-200 701.0 453 77.3
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 8.0e-200 700.7 439 79.0
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 8.0e-200 700.7 409 82.6
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 1.0e-199 700.3 435 79.1
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 1.0e-199 700.3 455 76.9
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.0e-199 700.3 471 74.7
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.4e-199 699.9 401 83.0
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.4e-199 699.9 479 75.2
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.4e-199 699.9 440 78.6
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 1.4e-199 699.9 414 81.9
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.8e-199 699.5 469 75.1
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.8e-199 699.5 409 82.4
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.8e-199 699.5 482 73.4
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 3.0e-199 698.7 443 78.3
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 3.0e-199 698.7 444 77.0
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 3.0e-199 698.7 448 77.0
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.0e-199 698.4 453 77.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 5.2e-199 698.0 479 75.2
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 5.2e-199 698.0 447 77.2
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 6.8e-199 697.6 444 77.3
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 8.9e-199 697.2 390 84.6
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 8.9e-199 697.2 477 73.0
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-198 696.8 462 75.8
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.2e-198 696.8 462 75.8
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.5e-198 696.4 442 78.5
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 2.0e-198 696.0 452 76.1
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 2.0e-198 696.0 447 77.9
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 2.6e-198 695.7 444 77.9
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 3.4e-198 695.3 464 74.6
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 4.4e-198 694.9 466 75.8
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 5.8e-198 694.5 393 84.5
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 5.8e-198 694.5 447 76.5
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.3e-197 693.3 451 75.8
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.3e-197 693.3 442 76.7
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.7e-197 693.0 418 80.4
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 2.2e-197 692.6 393 84.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 2.2e-197 692.6 431 78.7
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 2.2e-197 692.6 429 79.3
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.9e-197 692.2 393 84.0
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 3.7e-197 691.8 393 84.0
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 6.4e-197 691.0 452 75.7
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 6.4e-197 691.0 477 72.5
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 6.4e-197 691.0 443 77.4
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 8.3e-197 690.6 440 77.0
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 8.3e-197 690.6 511 70.1
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.1e-196 690.3 447 76.3
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.8e-196 689.5 393 84.0
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 1.8e-196 689.5 464 74.1
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 3.2e-196 688.7 393 83.5
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 5.4e-196 688.0 477 71.9
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 9.2e-196 687.2 481 73.6
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.6e-195 686.4 480 71.9
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 2.0e-195 686.0 455 74.5
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 4.6e-195 684.9 476 71.4
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 2.0e-190 669.5 442 73.3
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 2.1e-187 659.4 417 76.3
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 2.7e-187 659.1 436 73.4
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.9e-185 652.9 388 79.6
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.2e-184 650.2 399 78.7
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.2e-182 643.7 445 71.5
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 7.1e-180 634.4 428 74.1
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 5.1e-178 628.2 393 78.1
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 9.6e-169 597.4 387 72.6
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 3.9e-162 575.5 391 67.8
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 8.1e-160 567.8 379 68.1
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 5.4e-156 555.1 384 73.4
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.7e-155 552.7 411 69.6
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 6.2e-152 541.6 478 61.7
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.3e-146 523.1 285 88.1
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 1.1e-143 514.2 288 85.4
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.8e-135 486.9 308 77.9
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.1e-130 468.8 304 75.0
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.2e-96 357.1 238 73.1
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.6e-94 350.9 246 71.1
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.6e-77 292.0 169 82.2
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 8.1e-59 232.3 196 60.7
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 4.2e-55 219.9 135 79.3
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.1e-55 219.2 133 80.5
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 9.6e-52 208.8 130 75.4
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 2.7e-46 190.7 140 72.1
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.3e-32 145.2 96 76.0
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 4.6e-30 136.7 105 65.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 6.5e-24 116.3 145 49.7
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 8.8e-13 79.3 59 61.0
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 8.2e-11 72.8 287 26.8
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 7.7e-09 66.2 156 30.1
HPP92_020455 Vanilla planifolia HOM05D000776 ORTHO05D001624 1.7e-08 65.1 298 25.2
Haze_27503 Corylus avellana HOM05D000776 ORTHO05D002281 8.5e-08 62.8 163 29.4
HPP92_026179 Vanilla planifolia HOM05D000776 ORTHO05D001624 7.2e-07 59.7 156 28.8
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 7.9e-06 56.2 129 28.7
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 7.9e-06 56.2 152 28.9


User provided reference genes

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