Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.0e-57 224.9 111 100.0
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.6e-18 96.3 72 61.1
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.1e-18 95.9 68 63.2
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.7e-18 95.5 75 58.7
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 6.0e-18 94.4 79 57.0
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 1.3e-17 93.2 69 62.3
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 1.3e-17 93.2 68 64.7
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 8.7e-17 90.5 68 63.2
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.1e-16 90.1 68 58.8
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.5e-16 89.7 68 64.7
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 2.5e-16 89.0 85 47.1
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.5e-16 89.0 68 55.9
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 2.5e-16 89.0 68 55.9
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 5.7e-16 87.8 79 50.6
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 5.7e-16 87.8 73 54.8
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 7.4e-16 87.4 78 51.3
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 9.7e-16 87.0 63 60.3
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 9.7e-16 87.0 78 53.8
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 9.7e-16 87.0 68 58.8
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 9.7e-16 87.0 68 58.8
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 9.7e-16 87.0 67 56.7
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.3e-15 86.7 84 50.0
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.3e-15 86.7 67 58.2
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.6e-15 86.3 68 60.3
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.6e-15 86.3 68 60.3
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 1.6e-15 86.3 68 55.9
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 4.8e-15 84.7 68 60.3
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 6.3e-15 84.3 69 55.1
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 8.2e-15 84.0 68 52.9
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 8.2e-15 84.0 68 52.9
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.1e-14 83.6 79 50.6
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 1.1e-14 83.6 68 54.4
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.4e-14 83.2 83 51.8
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.4e-14 83.2 68 51.5
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 1.8e-14 82.8 63 58.7
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.8e-14 82.8 67 52.2
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 2.4e-14 82.4 86 47.7
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 2.4e-14 82.4 68 50.0
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 2.4e-14 82.4 82 46.3
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.1e-14 82.0 68 55.9
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 3.1e-14 82.0 83 48.2
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 3.1e-14 82.0 68 54.4
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 4.1e-14 81.6 67 55.2
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 4.1e-14 81.6 82 45.1
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 4.1e-14 81.6 67 53.7
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 4.1e-14 81.6 82 46.3
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 4.1e-14 81.6 68 52.9
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 5.3e-14 81.3 68 51.5
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 5.3e-14 81.3 68 52.9
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 5.3e-14 81.3 82 45.1
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 6.9e-14 80.9 73 54.8
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 9.0e-14 80.5 67 53.7
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 9.0e-14 80.5 76 47.4
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 9.0e-14 80.5 69 58.0
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.5e-13 79.7 68 51.5
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.5e-13 79.7 68 50.0
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 2.0e-13 79.3 68 52.9
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 2.0e-13 79.3 67 50.7
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 2.0e-13 79.3 67 50.7
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 2.0e-13 79.3 87 48.3
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.0e-13 79.3 68 54.4
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 2.6e-13 79.0 67 50.7
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 2.6e-13 79.0 67 53.7
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 2.6e-13 79.0 68 54.4
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.4e-13 78.6 67 52.2
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.4e-13 78.6 62 58.1
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 4.5e-13 78.2 68 50.0
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 5.9e-13 77.8 83 43.4
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 7.6e-13 77.4 68 50.0
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 7.6e-13 77.4 68 52.9
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.0e-12 77.0 67 53.7
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.0e-12 77.0 76 44.7
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.0e-12 77.0 78 50.0
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.3e-12 76.6 67 56.7
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.2e-12 75.9 68 48.5
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 3.8e-12 75.1 67 49.3
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 5.0e-12 74.7 68 51.5
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 5.0e-12 74.7 73 46.6
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 5.0e-12 74.7 73 46.6
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 6.5e-12 74.3 67 52.2
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 8.5e-12 73.9 68 50.0
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 2.5e-11 72.4 54 61.1
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 4.2e-11 71.6 68 51.5
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 5.5e-11 71.2 67 47.8
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.4e-11 70.5 52 57.7
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.6e-10 69.7 61 52.5
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.1e-10 69.3 62 46.8
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 3.6e-10 68.6 53 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 1.0e-09 67.0 62 50.0
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 2.5e-08 62.4 54 51.9
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 2.5e-08 62.4 62 45.2
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.5e-08 62.4 44 59.1
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 3.3e-08 62.0 60 50.0
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 8.2e-07 57.4 35 68.6
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.4e-06 56.6 34 70.6
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.8e-06 56.2 63 46.0
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 9.1e-06 53.9 35 60.0


User provided reference genes

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