Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 9.2e-62 240.0 115 100.0
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 9.2e-62 240.0 115 100.0
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.1e-11 73.6 82 46.3
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 2.0e-11 72.8 118 39.8
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 6.3e-10 67.8 73 41.1
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 1.8e-09 66.2 119 35.3
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 2.4e-09 65.9 80 40.0
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 4.1e-09 65.1 121 35.5
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 5.3e-09 64.7 125 34.4
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 9.1e-09 63.9 118 35.6
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 9.1e-09 63.9 121 38.0
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 9.1e-09 63.9 118 34.7
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 2.0e-08 62.8 109 37.6
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 2.0e-08 62.8 116 36.2
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 2.6e-08 62.4 80 38.8
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 2.6e-08 62.4 115 34.8
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 2.6e-08 62.4 114 35.1
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 3.4e-08 62.0 108 38.9
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 3.4e-08 62.0 76 42.1
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.9e-08 61.2 77 37.7
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 5.9e-08 61.2 115 38.3
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 7.7e-08 60.8 99 40.4
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 7.7e-08 60.8 105 36.2
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 7.7e-08 60.8 110 37.3
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 1.0e-07 60.5 77 37.7
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.0e-07 60.5 114 34.2
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.0e-07 60.5 111 36.9
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.0e-07 60.5 120 32.5
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.0e-07 60.5 117 31.6
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.7e-07 59.7 76 48.7
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.7e-07 59.7 78 39.7
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.7e-07 59.7 77 37.7
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.7e-07 59.7 77 37.7
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.2e-07 59.3 83 37.3
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 2.2e-07 59.3 78 39.7
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.2e-07 59.3 85 44.7
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 2.9e-07 58.9 117 33.3
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 6.5e-07 57.8 71 46.5
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 6.5e-07 57.8 34 67.6
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 8.5e-07 57.4 67 47.8
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 8.5e-07 57.4 118 33.9
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.1e-06 57.0 86 37.2
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 1.1e-06 57.0 77 39.0
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.4e-06 56.6 78 39.7
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 1.4e-06 56.6 83 36.1
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.4e-06 56.6 77 42.9
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 1.9e-06 56.2 73 38.4
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 3.2e-06 55.5 76 39.5
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 3.2e-06 55.5 115 36.5
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 3.2e-06 55.5 76 38.2
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 3.2e-06 55.5 123 32.5
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 4.2e-06 55.1 115 38.3
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 5.5e-06 54.7 38 63.2
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 7.2e-06 54.3 73 34.2
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 9.4e-06 53.9 102 32.4


User provided reference genes

Program Settings