Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0242G001 Amborella trichopoda HOM05D004435 ORTHO05D005103 1.8e-125 452.6 230 100.0
ATR0605G097 Amborella trichopoda HOM05D004435 ORTHO05D005103 3.5e-121 438.3 230 97.4
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 2.9e-83 312.4 230 66.5
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 3.8e-83 312.0 230 67.8
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.5e-82 310.1 230 65.2
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 1.5e-82 310.1 230 66.5
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 2.5e-82 309.3 230 64.8
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 5.5e-82 308.1 230 65.7
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 2.1e-81 306.2 230 65.2
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 2.7e-81 305.8 230 65.2
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 3.6e-81 305.4 230 66.1
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 6.1e-81 304.7 230 65.2
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 8.0e-81 304.3 230 63.9
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 8.0e-81 304.3 230 65.2
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 2.3e-80 302.8 230 65.7
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 3.0e-80 302.4 230 66.5
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 4.0e-80 302.0 230 64.3
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 6.7e-80 301.2 230 65.7
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.2e-79 300.4 230 63.5
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 1.5e-79 300.1 230 65.7
Cpa.g.c29521 Carica papaya HOM05D004435 ORTHO05D005103 2.0e-79 299.7 230 63.9
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 2.6e-79 299.3 230 63.9
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 2.6e-79 299.3 230 63.5
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 3.3e-79 298.9 230 63.9
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 3.3e-79 298.9 230 63.9
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.3e-79 298.9 230 63.9
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 3.3e-79 298.9 230 64.3
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 3.3e-79 298.9 230 64.8
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 4.4e-79 298.5 230 63.9
Hma1.2p1_0101F.1_g049200 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 4.4e-79 298.5 230 64.3
Hma1.2p1_0101F.1_g049210 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 4.4e-79 298.5 230 64.3
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 4.4e-79 298.5 230 64.8
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 9.7e-79 297.4 230 64.3
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 1.7e-78 296.6 230 64.3
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 1.7e-78 296.6 230 64.3
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.8e-78 295.8 230 63.5
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.8e-78 295.8 230 63.5
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 2.8e-78 295.8 231 64.5
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 4.8e-78 295.0 229 62.9
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 4.8e-78 295.0 230 64.3
Glyma.16G023300 Glycine max HOM05D004435 ORTHO05D005103 4.8e-78 295.0 231 64.5
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 6.3e-78 294.7 230 63.0
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.8e-77 293.1 230 63.5
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 2.4e-77 292.7 231 62.8
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 2.4e-77 292.7 230 64.3
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 3.1e-77 292.4 230 63.9
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 3.1e-77 292.4 229 63.8
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 4.1e-77 292.0 233 61.4
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 7.0e-77 291.2 230 63.0
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 7.0e-77 291.2 230 62.6
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 7.0e-77 291.2 231 63.6
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 9.1e-77 290.8 230 62.2
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 9.1e-77 290.8 230 59.6
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 1.2e-76 290.4 230 63.5
DCAR_008668 Daucus carota HOM05D004435 ORTHO05D005103 1.6e-76 290.0 230 61.7
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 1.6e-76 290.0 241 61.4
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 2.0e-76 289.7 230 61.3
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 2.7e-76 289.3 230 62.6
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.7e-76 289.3 237 62.0
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 3.5e-76 288.9 230 63.5
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 4.5e-76 288.5 228 61.8
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 4.5e-76 288.5 230 62.2
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 5.9e-76 288.1 230 61.7
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 1.7e-75 286.6 230 63.5
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 1.7e-75 286.6 230 61.7
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 3.8e-75 285.4 231 61.0
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 3.8e-75 285.4 228 61.4
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 3.8e-75 285.4 230 62.2
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 5.0e-75 285.0 230 60.4
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 5.0e-75 285.0 230 63.0
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 6.5e-75 284.6 230 60.0
BcaC02g12678 Brassica carinata HOM05D004435 ORTHO05D005103 1.1e-74 283.9 233 60.9
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 1.1e-74 283.9 233 60.9
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 1.1e-74 283.9 233 60.9
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 1.5e-74 283.5 230 60.9
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 1.5e-74 283.5 230 60.9
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 1.9e-74 283.1 230 60.4
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 3.2e-74 282.3 230 59.1
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 3.2e-74 282.3 235 60.4
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 7.2e-74 281.2 230 58.7
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 7.2e-74 281.2 230 59.1
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 9.4e-74 280.8 230 59.1
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 9.4e-74 280.8 230 60.4
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 4.7e-73 278.5 230 62.6
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 3.0e-72 275.8 230 59.6
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 4.0e-72 275.4 230 60.4
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 2.0e-71 273.1 230 57.4
SEGI_18144 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 2.6e-71 272.7 238 60.5
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 1.8e-69 266.5 230 59.6
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 1.2e-68 263.8 230 57.8
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 1.3e-67 260.4 235 57.4
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 5.2e-64 248.4 230 57.4
Hma1.2p1_0101F.1_g049280 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 2.3e-59 233.0 278 48.2
Mapoly0001s0466 Marchantia polymorpha HOM05D004435 ORTHO05D005103 4.3e-58 228.8 235 50.2
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 3.1e-56 222.6 239 48.1
Lj7C498G9 Lonicera japonica HOM05D004435 ORTHO05D005103 1.4e-53 213.8 189 57.7
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 1.9e-53 213.4 176 60.2
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 3.3e-50 202.6 176 55.1
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 9.5e-50 201.1 241 45.2
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 4.7e-49 198.7 230 49.1
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 5.4e-45 185.3 275 40.7
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 6.0e-36 155.2 171 53.8
Nitab4.5_0007244g0030 Nicotiana tabacum HOM05D004435 ORTHO05D005103 1.3e-35 154.1 95 81.1
Glyma.08G280100 Glycine max HOM05D004435 ORTHO05D005103 3.0e-27 126.3 88 73.9
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 1.6e-25 120.6 176 42.6
Cfa023431 Carpinus fangiana HOM05D004435 ORTHO05D005103 4.9e-22 109.0 163 39.9
TAR374G0897 Trochodendron aralioides HOM05D004435 ORTHO05D005103 8.7e-19 98.2 55 85.5
MCO11G580 Micromonas commoda HOM05D004435 ORTHO05D005103 3.6e-17 92.8 115 44.3
Cre04.g223000 Chlamydomonas reinhardtii HOM05D004435 ORTHO05D005103 9.0e-16 88.2 116 44.8
Nitab4.5_0007244g0040 Nicotiana tabacum HOM05D004435 ORTHO05D005103 5.8e-15 85.5 123 39.0
Psat4g016800 Pisum sativum HOM05D004435 ORTHO05D005103 1.6e-09 67.4 82 37.8
Psat2g140840 Pisum sativum HOM05D004435 ORTHO05D005103 1.7e-06 57.4 50 48.0


User provided reference genes

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