Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.3e-31 139.0 68 100.0
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.3e-31 139.0 68 100.0
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 2.4e-25 118.2 68 77.9
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 7.0e-25 116.7 68 82.4
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.6e-24 115.5 67 79.1
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 2.6e-24 114.8 67 79.1
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 3.5e-24 114.4 66 80.3
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 3.5e-24 114.4 66 80.3
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 3.5e-24 114.4 68 80.9
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 3.5e-24 114.4 67 77.6
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 4.5e-24 114.0 67 77.6
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 4.5e-24 114.0 67 77.6
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 5.9e-24 113.6 66 80.3
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 7.7e-24 113.2 68 75.0
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 7.7e-24 113.2 67 77.6
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.0e-23 112.8 67 77.6
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.3e-23 112.5 66 80.3
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.3e-23 112.5 66 80.3
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 1.7e-23 112.1 68 75.0
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 1.7e-23 112.1 67 74.6
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 2.2e-23 111.7 68 75.0
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 2.2e-23 111.7 67 77.6
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 2.2e-23 111.7 67 77.6
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-23 111.7 68 75.0
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-23 111.7 68 75.0
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 2.2e-23 111.7 66 75.8
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.2e-23 111.7 67 76.1
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.2e-23 111.7 66 80.3
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 2.9e-23 111.3 67 76.1
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 2.9e-23 111.3 67 77.6
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 2.9e-23 111.3 66 80.3
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 2.9e-23 111.3 66 78.8
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 2.9e-23 111.3 67 79.1
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 3.8e-23 110.9 66 80.3
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 3.8e-23 110.9 67 76.1
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 3.8e-23 110.9 66 77.3
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 3.8e-23 110.9 66 78.8
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 3.8e-23 110.9 67 76.1
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 3.8e-23 110.9 67 74.6
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 5.0e-23 110.5 68 75.0
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 5.0e-23 110.5 68 75.0
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 6.5e-23 110.2 66 77.3
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 6.5e-23 110.2 66 75.8
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 6.5e-23 110.2 67 74.6
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 6.5e-23 110.2 66 77.3
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 6.5e-23 110.2 67 73.1
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 6.5e-23 110.2 67 76.1
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 6.5e-23 110.2 67 76.1
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 8.5e-23 109.8 67 77.6
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 8.5e-23 109.8 68 73.5
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 8.5e-23 109.8 68 73.5
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 8.5e-23 109.8 68 73.5
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 8.5e-23 109.8 68 73.5
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 8.5e-23 109.8 67 74.6
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 8.5e-23 109.8 67 73.1
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 8.5e-23 109.8 68 73.5
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 8.5e-23 109.8 66 78.8
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.1e-22 109.4 66 77.3
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.1e-22 109.4 68 73.5
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 1.1e-22 109.4 67 76.1
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 77.3
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.5e-22 109.0 66 75.8
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.9e-22 108.6 68 75.0
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.9e-22 108.6 68 73.5
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 1.9e-22 108.6 68 75.0
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.5e-22 108.2 67 71.6
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 2.5e-22 108.2 66 77.3
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 3.2e-22 107.8 67 71.6
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 3.2e-22 107.8 66 74.2
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 3.2e-22 107.8 66 75.8
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 4.2e-22 107.5 66 74.2
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 4.2e-22 107.5 66 74.2
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 4.2e-22 107.5 66 75.8
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 5.5e-22 107.1 66 74.2
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 5.5e-22 107.1 66 74.2
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 7.2e-22 106.7 66 75.8
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 7.2e-22 106.7 66 75.8
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 7.2e-22 106.7 66 72.7
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 7.2e-22 106.7 67 70.1
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 7.2e-22 106.7 67 70.1
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 7.2e-22 106.7 67 70.1
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 9.4e-22 106.3 67 76.1
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 1.2e-21 105.9 66 72.7
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.6e-21 105.5 66 74.2
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 2.1e-21 105.1 67 73.1
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 4.7e-21 104.0 66 71.2
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 4.7e-21 104.0 67 70.1
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 4.7e-21 104.0 66 74.2
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.3e-20 101.7 66 69.7
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 1.2e-19 99.4 64 71.9
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.5e-19 99.0 66 69.7
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 1.5e-19 99.0 67 71.6
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 2.0e-19 98.6 67 71.6
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 7.5e-19 96.7 66 68.2
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 7.7e-16 86.7 55 72.7
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 1.0e-15 86.3 54 72.2
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 2.5e-14 81.6 65 58.5
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 7.2e-14 80.1 66 60.6
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 7.5e-11 70.1 63 47.6
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 2.4e-09 65.1 58 58.6
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 7.7e-08 60.1 52 51.9
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 1.7e-07 58.9 64 46.9
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 6.6e-07 57.0 36 72.2


User provided reference genes

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