Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.7e-158 562.8 308 100.0
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 8.2e-57 224.9 338 49.1
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.4e-51 207.6 314 45.9
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 2.3e-51 206.8 330 45.5
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 5.2e-51 205.7 323 44.9
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 5.2e-51 205.7 325 44.6
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 6.7e-51 205.3 321 44.5
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 6.7e-51 205.3 302 46.7
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.2e-50 204.5 315 46.7
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 2.6e-50 203.4 308 45.8
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 5.7e-50 202.2 326 45.4
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 9.7e-50 201.4 325 44.9
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 9.7e-50 201.4 324 44.4
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.3e-49 201.1 342 42.1
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.2e-49 200.3 325 44.9
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.8e-49 199.9 326 45.1
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.7e-49 199.5 287 46.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.7e-49 199.5 353 43.1
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 6.3e-49 198.7 330 45.5
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 8.3e-49 198.4 342 42.4
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.1e-48 198.0 293 47.1
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.1e-48 198.0 349 41.3
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.8e-48 197.2 314 44.3
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.8e-48 197.2 312 44.2
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.8e-48 197.2 300 45.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.4e-48 196.8 310 44.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 2.4e-48 196.8 330 43.3
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 3.1e-48 196.4 309 46.9
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 7.0e-48 195.3 325 46.5
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.2e-47 194.5 313 44.1
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.6e-47 194.1 321 44.9
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.6e-47 194.1 308 44.2
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 3.5e-47 193.0 316 43.4
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.0e-46 191.4 316 43.7
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.3e-46 191.0 291 47.1
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.7e-46 190.7 326 43.3
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 1.7e-46 190.7 282 44.3
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 2.2e-46 190.3 301 43.9
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 2.9e-46 189.9 340 42.9
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.9e-46 189.9 302 45.0
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 3.8e-46 189.5 309 44.7
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 3.8e-46 189.5 305 45.2
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 6.5e-46 188.7 340 42.6
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 6.5e-46 188.7 307 45.0
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 8.5e-46 188.3 276 47.5
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.1e-45 188.0 332 41.6
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 3.2e-45 186.4 330 41.8
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 4.2e-45 186.0 278 46.0
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 5.5e-45 185.7 307 43.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 4.7e-44 182.6 312 43.3
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 4.7e-44 182.6 292 46.6
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 4.7e-44 182.6 350 40.3
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 4.7e-44 182.6 355 40.3
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 6.1e-44 182.2 305 44.6
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 8.0e-44 181.8 315 42.5
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 8.0e-44 181.8 325 41.8
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 5.2e-43 179.1 307 44.6
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.4e-42 176.0 346 40.5
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 5.7e-42 175.6 235 48.5
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 5.7e-42 175.6 334 40.7
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 5.7e-42 175.6 354 39.5
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 9.8e-42 174.9 358 38.8
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 2.8e-41 173.3 307 45.3
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 4.8e-41 172.6 303 44.2
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.4e-40 171.0 297 41.8
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 4.1e-40 169.5 324 43.2
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 5.4e-40 169.1 288 45.8
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 7.0e-40 168.7 346 40.2
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 9.1e-40 168.3 300 42.7
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 9.1e-40 168.3 286 43.0
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 1.2e-39 167.9 291 45.0
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 1.2e-39 167.9 321 41.7
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.6e-39 167.5 285 43.9
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 2.0e-39 167.2 285 44.2
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.7e-39 166.8 323 42.1
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 3.5e-39 166.4 294 46.3
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 3.5e-39 166.4 329 37.1
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 4.5e-39 166.0 293 45.1
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.7e-39 165.2 332 41.0
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.0e-38 164.9 254 44.9
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 2.3e-38 163.7 290 44.8
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.3e-38 163.7 329 41.6
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 2.9e-38 163.3 323 39.9
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 3.8e-38 162.9 214 51.4
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 3.8e-38 162.9 317 43.5
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.8e-38 162.9 321 41.4
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 3.8e-38 162.9 322 37.0
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.1e-37 161.4 320 40.9
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.5e-37 160.2 321 41.1
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 2.5e-37 160.2 275 41.5
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 4.2e-37 159.5 330 38.5
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 7.2e-37 158.7 321 40.5
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 9.5e-37 158.3 288 43.8
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 9.5e-37 158.3 181 53.0
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 9.5e-37 158.3 323 40.2
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 3.6e-36 156.4 357 35.9
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 3.6e-36 156.4 274 44.2
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 6.1e-36 155.6 298 43.3
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 8.0e-36 155.2 211 46.9
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.0e-35 154.8 318 38.1
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.4e-35 154.5 245 45.7
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.8e-35 154.1 209 47.4
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 2.3e-35 153.7 305 41.6
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 2.3e-35 153.7 315 39.4
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.0e-35 153.3 272 41.5
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 3.0e-35 153.3 339 38.1
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 5.7e-34 149.1 399 37.8
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.7e-33 147.5 289 38.4
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 2.7e-31 140.2 358 36.0
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.5e-31 139.4 281 41.6
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.9e-31 139.0 344 36.9
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 2.9e-30 136.7 317 37.2
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.9e-29 134.0 314 38.2
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.3e-29 133.3 325 38.2
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 3.6e-28 129.8 212 46.2
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 4.7e-28 129.4 161 52.8
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.0e-26 124.0 254 40.6
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 4.4e-26 122.9 208 40.9
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 7.0e-24 115.5 129 55.0
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.0e-23 112.5 316 35.1
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.0e-22 111.7 119 56.3
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 3.0e-22 110.2 220 36.8
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 6.6e-22 109.0 252 38.9
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-20 104.4 119 52.9
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 4.0e-19 99.8 211 39.8
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 8.9e-19 98.6 306 34.3
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.2e-18 98.2 184 37.0
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.2e-18 98.2 184 37.0
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 7.5e-18 95.5 226 36.3
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.4e-16 90.5 158 40.5
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 9.2e-16 88.6 222 33.8
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 7.8e-15 85.5 117 47.9
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 6.6e-14 82.4 176 40.3
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 4.4e-10 69.7 110 43.6
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.1e-08 65.1 63 55.6
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 1.9e-08 64.3 140 33.6
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.0e-06 58.5 111 39.6


User provided reference genes

Program Settings