Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.4e-63 246.1 122 100.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.4e-36 155.6 111 67.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.4e-36 155.6 111 67.6
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 2.4e-36 155.6 121 62.8
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 4.1e-36 154.8 109 67.0
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 7.1e-36 154.1 106 68.9
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 9.2e-36 153.7 109 67.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.2e-35 153.3 106 68.9
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.2e-35 153.3 111 65.8
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.6e-35 152.9 109 66.1
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.6e-35 152.9 121 62.0
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.1e-35 152.5 109 67.9
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 2.1e-35 152.5 121 61.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.5e-35 151.8 108 68.5
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.6e-35 151.4 109 67.0
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 6.0e-35 151.0 122 63.1
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 7.8e-35 150.6 109 65.1
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 7.8e-35 150.6 109 67.0
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 7.8e-35 150.6 121 59.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.3e-34 149.8 109 66.1
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.7e-34 149.4 109 67.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.7e-34 149.4 111 64.0
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.7e-34 149.4 109 65.1
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.7e-34 149.4 111 67.6
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.0e-34 148.7 109 64.2
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.9e-34 148.3 109 64.2
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.9e-34 148.3 109 64.2
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.9e-34 148.3 111 64.0
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.1e-34 147.9 109 64.2
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 5.1e-34 147.9 118 60.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 6.6e-34 147.5 112 65.2
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 6.6e-34 147.5 110 65.5
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.1e-33 146.7 109 63.3
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.1e-33 146.7 109 62.4
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.1e-33 146.7 109 64.2
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.5e-33 146.4 110 63.6
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.5e-33 146.4 111 64.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.9e-33 146.0 111 64.0
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.5e-33 145.6 109 63.3
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 2.5e-33 145.6 111 64.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.5e-33 145.6 109 64.2
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.5e-33 145.6 109 65.1
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.5e-33 145.6 112 64.3
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.5e-33 145.6 112 64.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 4.3e-33 144.8 111 64.9
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 4.3e-33 144.8 109 64.2
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 5.6e-33 144.4 111 63.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 5.6e-33 144.4 114 61.4
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 5.6e-33 144.4 109 59.6
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 5.6e-33 144.4 111 63.1
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 7.3e-33 144.1 109 63.3
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 7.3e-33 144.1 111 61.3
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 7.3e-33 144.1 114 61.4
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 7.3e-33 144.1 111 60.4
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 7.3e-33 144.1 106 64.2
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.3e-33 144.1 110 63.6
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.3e-33 144.1 110 63.6
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 9.6e-33 143.7 109 63.3
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 9.6e-33 143.7 107 63.6
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 9.6e-33 143.7 111 59.5
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.2e-32 143.3 109 61.5
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.2e-32 143.3 106 62.3
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.6e-32 142.9 110 63.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.6e-32 142.9 112 63.4
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.6e-32 142.9 110 62.7
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.6e-32 142.9 121 59.5
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.1e-32 142.5 110 66.4
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.1e-32 142.5 110 66.4
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 2.8e-32 142.1 109 62.4
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.8e-32 142.1 112 63.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 3.6e-32 141.7 109 59.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 4.7e-32 141.4 111 61.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 4.7e-32 141.4 111 61.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.7e-32 141.4 111 64.0
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.2e-32 141.0 111 64.0
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.2e-32 141.0 111 64.0
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 6.2e-32 141.0 108 64.8
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 8.1e-32 140.6 109 61.5
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.4e-31 139.8 109 59.6
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.4e-31 139.8 109 61.5
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.8e-31 139.4 110 63.6
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 2.4e-31 139.0 119 61.3
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.4e-31 139.0 110 62.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.1e-31 138.7 109 60.6
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.1e-31 138.7 110 60.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.0e-31 138.3 109 60.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.0e-31 138.3 121 55.4
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 5.2e-31 137.9 109 61.5
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 6.8e-31 137.5 109 59.6
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 6.8e-31 137.5 109 60.6
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 8.9e-31 137.1 109 59.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 8.9e-31 137.1 109 59.6
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 8.9e-31 137.1 110 59.1
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.2e-30 136.7 118 55.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.2e-30 136.7 109 60.6
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-30 136.3 110 60.0
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-30 136.3 109 58.7
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.0e-30 136.0 110 60.0
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.0e-30 136.0 121 55.4
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.6e-30 135.6 110 58.2
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 4.4e-30 134.8 110 58.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.8e-30 134.4 110 58.2
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 7.6e-30 134.0 111 59.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.2e-29 132.5 109 60.6
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.9e-29 132.1 113 57.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.8e-29 131.7 111 60.4
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.4e-29 131.0 111 59.5
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.9e-28 129.4 105 56.2
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.9e-28 129.4 84 71.4
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 7.1e-28 127.5 106 56.6
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 9.3e-28 127.1 104 59.6
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 9.3e-28 127.1 78 78.2
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.7e-27 125.6 106 56.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.7e-27 125.6 110 56.4
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.5e-27 125.2 96 62.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 3.9e-26 121.7 95 64.2
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 8.7e-26 120.6 107 55.1
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.9e-25 119.4 103 59.2
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 3.3e-25 118.6 111 55.0
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 7.3e-25 117.5 79 70.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 2.1e-24 115.9 79 69.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 4.8e-24 114.8 111 53.2
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 3.1e-23 112.1 112 53.6
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.4e-20 103.2 89 56.2
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.7e-19 99.0 109 47.7
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 3.3e-17 92.0 63 66.7
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.3e-17 91.7 57 73.7
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 2.0e-14 82.8 57 66.7
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.9e-12 76.3 88 47.7
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.7e-11 72.4 66 54.5
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.7e-11 72.4 53 62.3


User provided reference genes

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