Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 6.1e-123 444.1 219 100.0
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 3.1e-90 335.5 220 75.9
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 3.8e-88 328.6 221 72.4
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 3.8e-88 328.6 220 71.8
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 6.4e-88 327.8 220 71.8
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 1.1e-87 327.0 221 72.9
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 1.4e-87 326.6 219 73.5
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 1.4e-87 326.6 219 73.1
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 1.9e-87 326.2 220 72.7
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 1.9e-87 326.2 220 73.2
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 2.4e-87 325.9 219 70.8
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 3.2e-87 325.5 221 72.9
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 4.2e-87 325.1 220 72.3
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 7.1e-87 324.3 221 71.5
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 1.6e-86 323.2 220 72.3
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 2.1e-86 322.8 221 71.0
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 2.7e-86 322.4 220 72.7
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 2.7e-86 322.4 220 71.4
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 2.7e-86 322.4 220 72.7
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 2.7e-86 322.4 221 71.0
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 3.5e-86 322.0 220 71.8
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 3.5e-86 322.0 221 71.9
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 4.6e-86 321.6 220 71.8
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 4.6e-86 321.6 221 70.6
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 6.0e-86 321.2 221 71.9
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 6.0e-86 321.2 221 71.9
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 7.8e-86 320.9 220 70.9
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 1.0e-85 320.5 222 73.0
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 1.0e-85 320.5 220 71.8
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 1.3e-85 320.1 221 70.6
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 2.3e-85 319.3 221 71.9
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 2.3e-85 319.3 219 71.2
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 3.0e-85 318.9 222 72.5
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 3.9e-85 318.5 222 71.6
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.1e-85 318.2 222 71.6
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 5.1e-85 318.2 220 71.8
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 6.6e-85 317.8 222 72.1
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 6.6e-85 317.8 222 71.2
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 1.5e-84 316.6 220 71.4
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 1.5e-84 316.6 220 70.9
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 1.5e-84 316.6 220 71.8
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 1.9e-84 316.2 220 71.4
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.9e-84 316.2 222 71.6
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 2.5e-84 315.8 220 72.7
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 2.5e-84 315.8 221 71.5
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 5.6e-84 314.7 220 69.1
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.6e-84 314.7 223 71.7
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 5.6e-84 314.7 220 71.8
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 9.6e-84 313.9 220 70.5
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 1.6e-83 313.2 220 70.0
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 1.6e-83 313.2 221 70.1
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 1.6e-83 313.2 221 70.1
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 8.1e-83 310.8 220 70.0
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 1.1e-82 310.5 220 70.9
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 1.1e-82 310.5 219 67.1
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 1.1e-82 310.5 220 69.5
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 1.4e-82 310.1 238 66.4
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 1.8e-82 309.7 220 69.5
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 1.8e-82 309.7 220 70.5
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 2.4e-82 309.3 221 69.2
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 3.1e-82 308.9 221 70.6
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 6.9e-82 307.8 221 67.4
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 1.2e-81 307.0 221 69.7
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 1.5e-81 306.6 220 72.3
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 2.6e-81 305.8 220 69.1
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 5.8e-81 304.7 220 69.1
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 5.8e-81 304.7 220 70.0
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 7.6e-81 304.3 220 68.6
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 3.8e-80 302.0 209 70.3
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 3.8e-80 302.0 220 68.2
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 1.1e-79 300.4 229 66.4
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 1.1e-79 300.4 220 67.3
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 1.4e-79 300.1 220 68.6
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 1.4e-79 300.1 220 68.6
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 1.4e-79 300.1 219 68.0
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 2.4e-79 299.3 222 67.1
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 2.4e-79 299.3 222 67.1
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 2.4e-79 299.3 197 73.6
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 3.2e-79 298.9 219 67.6
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 5.4e-79 298.1 221 67.0
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 1.2e-78 297.0 222 66.2
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 7.9e-78 294.3 221 66.5
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 1.7e-77 293.1 221 65.6
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 5.1e-77 291.6 220 66.4
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 1.1e-76 290.4 233 63.5
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 1.9e-76 289.7 220 65.9
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 2.8e-75 285.8 194 73.2
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 8.1e-75 284.3 220 64.1
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 1.1e-74 283.9 221 65.6
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 1.1e-74 283.9 221 65.6
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 6.9e-74 281.2 200 70.0
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 9.0e-74 280.8 194 70.6
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 1.5e-73 280.0 195 69.2
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 2.0e-73 279.6 194 70.1
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 2.0e-73 279.6 300 52.3
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 4.5e-73 278.5 221 64.7
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 4.5e-73 278.5 198 70.2
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 1.3e-72 276.9 221 64.3
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 2.2e-72 276.2 194 69.1
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 8.4e-72 274.2 221 64.3
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 8.4e-72 274.2 216 64.4
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 1.9e-71 273.1 320 49.4
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 1.9e-71 273.1 196 68.4
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 1.6e-70 270.0 289 51.9
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 2.7e-70 269.2 194 66.0
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 1.0e-69 267.3 195 68.2
Duzib147G0596 Durio zibethinus HOM05D005053 ORTHO05D006206 1.8e-69 266.5 194 67.5
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 2.3e-69 266.2 194 64.9
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 3.0e-69 265.8 184 70.7
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 8.7e-69 264.2 198 68.7
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 5.6e-68 261.5 195 67.2
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 1.6e-67 260.0 193 65.8
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 2.1e-67 259.6 226 59.7
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 4.8e-67 258.5 214 59.3
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 1.5e-65 253.4 222 57.2
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 2.0e-65 253.1 219 58.4
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 2.6e-65 252.7 214 57.9
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 4.5e-65 251.9 205 62.4
CBR_g23008 Chara braunii HOM05D005053 ORTHO05D006206 1.0e-64 250.8 223 56.5
CiPaw.02G011700 Carya illinoinensis HOM05D005053 ORTHO05D006206 1.7e-64 250.0 222 60.8
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 5.5e-63 245.0 172 69.2
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 9.3e-63 244.2 179 68.2
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 2.1e-62 243.0 228 57.9
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 2.1e-62 243.0 228 57.9
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 6.7e-61 238.0 223 57.8
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 2.5e-60 236.1 169 66.9
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 4.3e-60 235.3 219 56.6
Prupe.7G140800 Prunus persica HOM05D005053 ORTHO05D006206 1.1e-58 230.7 163 69.9
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 5.9e-57 224.9 193 58.5
Psat4g088960 Pisum sativum HOM05D005053 ORTHO05D006206 1.7e-56 223.4 159 68.6
Nitab4.5_0002157g0070 Nicotiana tabacum HOM05D005053 ORTHO05D006206 3.6e-54 215.7 169 64.5
Ah.03g144090 Amaranthus hybridus HOM05D005053 ORTHO05D006206 7.9e-54 214.5 195 56.9
AagrBONN_evm.TU.Sc2ySwM_369.468 Anthoceros agrestis HOM05D000050 ORTHO05D000771 7.4e-52 208.0 219 50.7
Psat4g089040 Pisum sativum HOM05D005053 ORTHO05D006206 7.9e-46 188.0 183 53.6
Sopen02g035010 Solanum pennellii HOM05D005053 ORTHO05D006206 7.4e-44 181.4 162 56.2
MCO07G250 Micromonas commoda HOM05D005053 ORTHO05D006206 2.0e-41 173.3 221 41.6
CDE02G0556 Ceratophyllum demersum HOM05D005053 ORTHO05D006206 7.7e-41 171.4 99 79.8
TPR.G40637 Trifolium pratense HOM05D005053 ORTHO05D006206 2.3e-37 159.8 93 77.4
Cre07.g334700 Chlamydomonas reinhardtii HOM05D005053 ORTHO05D006206 7.4e-36 154.8 242 37.6
SGA_v2.0_scaffold15G07238 Striga asiatica HOM05D005053 ORTHO05D006206 3.1e-34 149.4 237 40.1
PRCOL_00006110 Prasinoderma coloniale HOM05D005053 ORTHO05D006206 2.5e-31 139.8 217 38.7
FAN19G1388 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.2e-29 132.1 77 79.2
Zm00001eb184160 Zea mays HOM05D005053 ORTHO05D006206 7.0e-26 121.7 84 66.7
TPR.G672 Trifolium pratense HOM05D005053 ORTHO05D006206 1.7e-24 117.1 101 60.4
Nitab4.5_0003750g0060 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.2e-22 110.9 140 42.9
AUR62028910 Chenopodium quinoa HOM05D005053 ORTHO05D006206 1.1e-15 87.8 94 47.9
Ciclev10027037m.g Citrus clementina HOM05D005053 ORTHO05D006206 8.0e-14 81.6 79 55.7
Cfa024505 Carpinus fangiana HOM05D005053 ORTHO05D124968 1.2e-12 77.8 205 26.3
CAN.G836.41 Capsicum annuum HOM05D005053 ORTHO05D024763 1.6e-09 67.4 150 36.7


User provided reference genes

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