Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 0.0e+00 2936.0 1460 100.0
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 4.4e-233 812.8 1487 36.7
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 1.5e-225 787.7 1493 38.8
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 1.7e-221 774.2 1499 36.1
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 2.9e-208 730.3 1487 34.9
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 3.7e-200 703.4 1327 37.2
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 1.7e-197 694.5 1492 33.7
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 3.0e-197 693.7 1502 34.9
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 1.1e-196 691.8 1478 34.3
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 7.3e-196 689.1 1490 33.6
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 1.2e-195 688.3 1493 34.4
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 4.7e-195 686.4 1487 33.8
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 8.9e-194 682.2 1485 33.7
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 4.4e-193 679.9 1505 34.9
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 2.3e-189 667.5 1486 33.6
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 1.2e-187 661.8 1505 33.7
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 6.2e-187 659.4 1489 33.4
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 2.9e-184 650.6 1521 33.3
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 1.1e-183 648.7 1484 33.0
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.9e-180 637.9 1498 33.0
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 1.6e-179 634.8 1503 33.3
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 3.1e-178 630.6 1491 33.7
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 1.3e-176 625.2 1424 33.6
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 2.4e-175 620.9 1500 32.9
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 2.4e-175 620.9 1416 33.3
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 1.6e-174 618.2 1496 33.0
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 1.0e-173 615.5 1546 32.6
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 1.9e-172 611.3 1496 32.6
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 2.5e-172 610.9 1432 32.6
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 2.1e-171 607.8 1509 31.6
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.4e-170 604.4 1512 31.7
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 2.2e-168 597.8 1511 32.2
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 2.3e-165 587.8 1482 30.7
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 8.2e-163 579.3 1414 31.0
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.4e-162 578.6 1493 31.9
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 3.1e-162 577.4 1530 31.6
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 4.5e-161 573.5 1496 31.2
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 5.8e-161 573.2 1491 30.5
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 4.9e-160 570.1 1432 31.4
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 1.1e-159 568.9 1485 31.0
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 2.5e-159 567.8 1460 32.0
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 1.2e-158 565.5 1429 31.6
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 1.3e-155 555.4 1479 30.6
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 1.8e-154 551.6 1505 30.8
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 6.9e-154 549.7 1461 29.9
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 2.2e-152 544.7 1473 30.1
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 2.2e-152 544.7 1425 30.9
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 1.1e-151 542.3 1446 31.2
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 2.5e-148 531.2 1488 31.9
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 9.7e-148 529.3 1230 33.1
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.3e-147 528.9 1479 31.4
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 4.8e-147 526.9 1519 30.0
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 1.8e-146 525.0 1488 29.9
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.7e-144 518.5 1477 31.5
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 6.7e-141 506.5 1183 32.0
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 7.4e-140 503.1 1471 28.8
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 3.9e-133 480.7 1481 28.6
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 2.0e-132 478.4 1481 30.7
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 5.7e-132 476.9 1189 32.0
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 2.4e-130 471.5 1491 29.6
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 5.3e-130 470.3 1220 31.1
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 1.7e-128 465.3 1470 29.2
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 5.5e-127 460.3 1469 29.1
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 1.8e-125 455.3 1487 27.7
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 9.7e-124 449.5 1469 28.9
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 1.7e-123 448.7 1453 28.3
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 1.7e-123 448.7 1453 28.3
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 1.1e-122 446.0 1487 27.2
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 7.0e-122 443.4 1419 27.7
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 9.1e-122 443.0 1457 28.2
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 9.1e-122 443.0 1290 29.8
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 1.2e-121 442.6 1480 28.5
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 2.7e-121 441.4 1387 28.7
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 9.4e-119 433.0 1469 27.9
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 1.2e-118 432.6 1418 27.7
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 4.0e-117 427.6 1172 30.2
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 5.2e-117 427.2 1482 28.0
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 1.2e-113 416.0 1585 26.4
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 1.1e-106 392.9 996 31.7
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 9.8e-100 369.8 965 31.2
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 4.9e-99 367.5 1297 28.1
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 3.9e-96 357.8 1057 29.9
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 7.3e-87 327.0 857 30.3
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 5.8e-84 317.4 1402 24.9
Oeu032242.1 Olea europaea HOM05D006182 ORTHO05D007236 5.1e-80 304.3 392 43.4
HPP92_010557 Vanilla planifolia HOM05D006182 ORTHO05D007236 7.8e-73 280.4 807 29.5
Lalb_Chr04g0264231 Lupinus albus HOM05D006182 ORTHO05D007236 5.8e-68 264.2 474 38.4
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 2.4e-66 258.8 827 27.8
Sc15g0006460 Simmondsia chinensis HOM05D006182 ORTHO05D007236 1.6e-65 256.1 519 34.9
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 4.6e-65 254.6 1403 23.4
FAN10G2690 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.9e-64 251.5 320 44.4
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 9.6e-63 246.9 811 28.4
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 7.6e-60 237.3 1474 23.9
Cpa.g.c37201 Carica papaya HOM05D006182 ORTHO05D007236 9.9e-60 236.9 475 34.3
SEGI_31096 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 1.3e-59 236.5 686 28.9
Cpa.g.sc376.1 Carica papaya HOM05D006182 ORTHO05D007236 3.0e-56 225.3 651 30.3
Ciclev10003565m.g Citrus clementina HOM05D006182 ORTHO05D007236 2.1e-49 202.6 442 35.1
FAN16G1533 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.7e-49 202.2 330 38.5
Mapoly0037s0065 Marchantia polymorpha HOM05D006182 ORTHO05D007236 2.7e-49 202.2 735 25.6
Os09g0376000 Oryza sativa ssp. japonica HOM05D006182 ORTHO05D007236 1.3e-48 199.9 533 28.5
FAN19G3122 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.9e-48 198.4 236 45.8
Hma1.2p1_2764F.1_g328150 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 5.8e-44 184.5 360 36.4
FAN17G1630 Fragaria x ananassa HOM05D006182 ORTHO05D007236 5.7e-39 167.9 207 44.4
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 3.4e-36 158.7 384 32.8
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 5.0e-35 154.8 273 36.3
Eucgr.F02378 Eucalyptus grandis HOM05D006182 ORTHO05D007236 7.2e-34 151.0 453 30.2
SEGI_35767 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 9.4e-34 150.6 269 36.4
SMO356G0287 Selaginella moellendorffii HOM05D006182 ORTHO05D007236 2.1e-33 149.4 638 27.1
TWI36G0305 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 6.7e-32 144.4 378 31.0
GSVIVG01009572001 Vitis vinifera HOM05D006182 ORTHO05D007236 1.1e-29 137.1 122 53.3
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.4e-28 132.1 547 26.9
FAN19G0764 Fragaria x ananassa HOM05D006182 ORTHO05D007236 6.5e-27 127.9 172 42.4
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 1.2e-25 123.6 203 33.0
Lalb_Chr04g0264191 Lupinus albus HOM05D006182 ORTHO05D007236 1.7e-22 113.2 426 26.5
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 6.3e-22 111.3 292 30.1
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 2.0e-20 106.3 171 36.8
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 5.9e-20 104.8 166 36.1
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 5.9e-20 104.8 200 34.5
Lalb_Chr04g0264211 Lupinus albus HOM05D006182 ORTHO05D007236 2.2e-19 102.8 168 38.1
SEGI_19792 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 6.5e-19 101.3 302 29.8
Dinv00354 Davidia involucrata HOM05D006182 ORTHO05D007236 7.4e-15 87.8 77 54.5
AagrBONN_evm.TU.Sc2ySwM_368.213 Anthoceros agrestis HOM05D014773 ORTHO05D007236 1.7e-11 76.6 410 23.7
Dinv35387 Davidia involucrata HOM05D013161 ORTHO05D007236 2.2e-11 76.3 51 64.7
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 9.4e-10 70.9 365 23.8
MBI16_g32432_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 2.7e-09 69.3 64 56.2
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 2.3e-08 66.2 183 27.9


User provided reference genes

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