Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0222G012 Amborella trichopoda HOM05D004591 ORTHO05D005749 2.7e-24 114.4 54 100.0
ATR0706G214 Amborella trichopoda HOM05D004591 ORTHO05D005749 3.1e-20 100.9 54 87.0
Lj4g0005644 Lotus japonicus HOM05D004591 ORTHO05D005749 2.5e-17 91.3 54 77.8
SEGI_19336 Sequoiadendron giganteum HOM05D004591 ORTHO05D005749 2.5e-17 91.3 54 77.8
arahy.Tifrunner.gnm1.ann1.7AW5Q0 Arachis hypogaea HOM05D004591 ORTHO05D005749 3.3e-17 90.9 54 77.8
arahy.Tifrunner.gnm1.ann1.Q8N8UE Arachis hypogaea HOM05D004591 ORTHO05D005749 3.3e-17 90.9 54 77.8
Manes.03G192300 Manihot esculenta HOM05D004591 ORTHO05D005749 5.5e-17 90.1 54 75.9
CSS0009969 Camellia sinensis var. sinensis HOM05D004591 ORTHO05D005749 7.2e-17 89.7 54 75.9
CSS0050493 Camellia sinensis var. sinensis HOM05D004591 ORTHO05D005749 7.2e-17 89.7 54 75.9
CANSAT78G2472 Cannabis sativa HOM05D004591 ORTHO05D005749 7.2e-17 89.7 54 75.9
Nn4g25961 Nelumbo nucifera HOM05D004591 ORTHO05D005749 7.2e-17 89.7 54 75.9
Potri.010G022300 Populus trichocarpa HOM05D004591 ORTHO05D005749 7.2e-17 89.7 54 75.9
VMungo1215G2997 Vigna mungo HOM05D004591 ORTHO05D005749 7.2e-17 89.7 54 77.8
Cc03_g02140 Coffea canephora HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
FvH4_4g17580 Fragaria vesca HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
FAN07G0597 Fragaria x ananassa HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
FAN12G0549 Fragaria x ananassa HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
FAN12G3150 Fragaria x ananassa HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
FAN17G1172 Fragaria x ananassa HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
Gohir.A10G161800 Gossypium hirsutum HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
MD16G1173200 Malus domestica HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
Nn3g21355 Nelumbo nucifera HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
Prupe.1G140000 Prunus persica HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
RcHm_v2.0_Chr4g0421481 Rosa chinensis HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
SalBow3G4019 Salvia bowleyana HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 75.5
SGA_v2.0_scaffold43G16263 Striga asiatica HOM05D004591 ORTHO05D005749 9.5e-17 89.4 53 77.4
HanXRQChr03g0080861 Helianthus annuus HOM05D004591 ORTHO05D005749 1.2e-16 89.0 54 74.1
Psat4g047160 Pisum sativum HOM05D004591 ORTHO05D005749 1.2e-16 89.0 54 75.9
Potri.008G215300 Populus trichocarpa HOM05D004591 ORTHO05D005749 1.2e-16 89.0 54 75.9
PGR004G2200 Punica granatum HOM05D004591 ORTHO05D005749 1.2e-16 89.0 53 75.5
Ah.13g074560 Amaranthus hybridus HOM05D004591 ORTHO05D005749 1.6e-16 88.6 53 75.5
DCAR_002455 Daucus carota HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 74.1
DCAR_002457 Daucus carota HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 74.1
Eucgr.H03866 Eucalyptus grandis HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 74.1
MBI18_g01976_MAGBIO Magnolia biondii HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 75.9
Sc25g0004740 Simmondsia chinensis HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 75.9
Thecc.04G279900 Theobroma cacao HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 75.9
TAR636G0963 Trochodendron aralioides HOM05D004591 ORTHO05D005749 1.6e-16 88.6 54 74.1
EL10Ac3g06572 Beta vulgaris HOM05D004591 ORTHO05D005749 2.1e-16 88.2 53 75.5
CDE12G0904 Ceratophyllum demersum HOM05D004591 ORTHO05D005749 2.1e-16 88.2 54 74.1
Hma1.2p1_0698F.1_g205415 Hydrangea macrophylla HOM05D004591 ORTHO05D005749 2.1e-16 88.2 54 74.1
Oeu062899.1 Olea europaea HOM05D004591 ORTHO05D005749 2.1e-16 88.2 53 73.6
Phvul.003G102400 Phaseolus vulgaris HOM05D004591 ORTHO05D005749 2.1e-16 88.2 54 75.9
TWI53G0054 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 2.1e-16 88.2 54 72.2
TWI53G1348 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 2.1e-16 88.2 54 72.2
Actinidia01943 Actinidia chinensis HOM05D004591 ORTHO05D005749 2.8e-16 87.8 54 74.1
Actinidia40243 Actinidia chinensis HOM05D004591 ORTHO05D005749 2.8e-16 87.8 54 74.1
Duzib052G0124 Durio zibethinus HOM05D004591 ORTHO05D005749 2.8e-16 87.8 54 75.9
Migut.N01937 Erythranthe guttata HOM05D004591 ORTHO05D005749 2.8e-16 87.8 53 75.5
Lj3A813T31 Lonicera japonica HOM05D004591 ORTHO05D005749 2.8e-16 87.8 54 74.1
PSO210G4745 Papaver somniferum HOM05D004591 ORTHO05D005749 3.6e-16 87.4 54 74.1
PSO832G1860 Papaver somniferum HOM05D004591 ORTHO05D005749 3.6e-16 87.4 54 74.1
Sabra08G0155500 Salix brachista HOM05D004591 ORTHO05D005749 3.6e-16 87.4 54 74.1
Sed0000507 Sechium edule HOM05D004591 ORTHO05D005749 3.6e-16 87.4 54 74.1
SMO118G0294 Selaginella moellendorffii HOM05D004591 ORTHO05D005749 3.6e-16 87.4 53 69.8
Hund20576 Selenicereus undatus HOM05D004591 ORTHO05D005749 3.6e-16 87.4 53 75.5
vmacro08109 Vaccinium macrocarpon HOM05D004591 ORTHO05D005749 3.6e-16 87.4 54 74.1
Aqoxy2G03072 Aquilegia oxysepala HOM05D004591 ORTHO05D005749 4.7e-16 87.0 54 74.1
MSTRG.28019 Avicennia marina HOM05D004591 ORTHO05D005749 4.7e-16 87.0 53 73.6
ClCG05G005920 Citrullus lanatus HOM05D004591 ORTHO05D005749 4.7e-16 87.0 54 75.9
MELO3C006623.2 Cucumis melo HOM05D004591 ORTHO05D005749 4.7e-16 87.0 54 75.9
CsaV3_3G014300 Cucumis sativus L. HOM05D004591 ORTHO05D005749 4.7e-16 87.0 54 75.9
Glyma.17G024200 Glycine max HOM05D004591 ORTHO05D005749 4.7e-16 87.0 52 75.0
Lsat_1_v5_gn_5_52860 Lactuca sativa HOM05D004591 ORTHO05D005749 4.7e-16 87.0 53 71.7
Lj4g0023442 Lotus japonicus HOM05D004591 ORTHO05D005749 4.7e-16 87.0 52 75.0
TWI09G1039 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 4.7e-16 87.0 54 72.2
unitig_578.g16759 Utricularia gibba HOM05D004591 ORTHO05D005749 4.7e-16 87.0 53 73.6
CAN.G580.3 Capsicum annuum HOM05D004591 ORTHO05D005749 6.1e-16 86.7 53 71.7
Glyma.07G250200 Glycine max HOM05D004591 ORTHO05D005749 6.1e-16 86.7 52 75.0
Gorai.011G187900 Gossypium raimondii HOM05D004591 ORTHO05D005749 6.1e-16 86.7 53 73.6
Medtr4g119230 Medicago truncatula HOM05D004591 ORTHO05D005749 6.1e-16 86.7 54 75.9
Oeu044779.2 Olea europaea HOM05D004591 ORTHO05D005749 6.1e-16 86.7 53 71.7
Peaxi162Scf00386g00533 Petunia axillaris HOM05D004591 ORTHO05D005749 6.1e-16 86.7 53 69.8
TPR.G14635 Trifolium pratense HOM05D004591 ORTHO05D005749 6.1e-16 86.7 54 75.9
GSVIVG01017781001 Vitis vinifera HOM05D004591 ORTHO05D005749 6.1e-16 86.7 54 74.1
Atru.chr4.2787 Acer truncatum HOM05D004591 ORTHO05D005749 8.0e-16 86.3 54 70.4
C03p10420 Brassica napus HOM05D004591 ORTHO05D005749 8.0e-16 86.3 53 73.6
Haze_01244 Corylus avellana HOM05D004591 ORTHO05D005749 8.0e-16 86.3 54 72.2
DCAR_002452 Daucus carota HOM05D004591 ORTHO05D005749 8.0e-16 86.3 54 72.2
Rhsim04G0218600 Rhododendron simsii HOM05D004591 ORTHO05D005749 8.0e-16 86.3 54 72.2
TAR365G0597 Trochodendron aralioides HOM05D004591 ORTHO05D005749 8.0e-16 86.3 54 72.2
COL.COLO4_13908 Corchorus olitorius HOM05D004591 ORTHO05D005749 1.0e-15 85.9 54 72.2
Duzib151G0997 Durio zibethinus HOM05D004591 ORTHO05D005749 1.0e-15 85.9 53 71.7
AUR62041198 Chenopodium quinoa HOM05D004591 ORTHO05D005749 1.4e-15 85.5 53 73.6
Gohir.D10G168300 Gossypium hirsutum HOM05D004591 ORTHO05D005749 1.4e-15 85.5 54 72.2
Lalb_Chr13g0303761 Lupinus albus HOM05D004591 ORTHO05D005749 1.4e-15 85.5 52 73.1
QL06p007990 Quercus lobata HOM05D004591 ORTHO05D005749 1.4e-15 85.5 53 71.7
Os05g0149800 Oryza sativa ssp. japonica HOM05D004591 ORTHO05D005749 1.8e-15 85.1 53 69.8
CiPaw.02G085000 Carya illinoinensis HOM05D004591 ORTHO05D005749 3.0e-15 84.3 54 72.2
Zm00001eb418170 Zea mays HOM05D004591 ORTHO05D005749 3.0e-15 84.3 53 69.8
Nitab4.5_0000644g0140 Nicotiana tabacum HOM05D004591 ORTHO05D005749 4.0e-15 84.0 53 69.8
Solyc01g067500.3 Solanum lycopersicum HOM05D004591 ORTHO05D005749 5.2e-15 83.6 53 69.8
Sopen01g029430 Solanum pennellii HOM05D004591 ORTHO05D005749 5.2e-15 83.6 53 69.8
Zm00001eb354190 Zea mays HOM05D004591 ORTHO05D005749 5.2e-15 83.6 53 66.0
BcaB08g36661 Brassica carinata HOM05D004591 ORTHO05D005749 6.8e-15 83.2 53 71.7
Pp3c6_6290 Physcomitrium patens HOM05D004591 ORTHO05D005749 6.8e-15 83.2 52 67.3
ECA246G1561 Erigeron canadensis HOM05D004591 ORTHO05D005749 1.5e-14 82.0 50 70.0
Manes.15G015000 Manihot esculenta HOM05D004591 ORTHO05D005749 1.5e-14 82.0 54 66.7
AL6G29850 Arabidopsis lyrata HOM05D004591 ORTHO05D005749 2.0e-14 81.6 46 76.1
A10p20980 Brassica napus HOM05D004591 ORTHO05D005749 2.6e-14 81.3 46 76.1
BraA10t44163Z Brassica rapa HOM05D004591 ORTHO05D005749 2.6e-14 81.3 46 76.1
BcaB01g05264 Brassica carinata HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
BcaB05g23341 Brassica carinata HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
BcaC03g13610 Brassica carinata HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
A02p05010 Brassica napus HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
A03p08950 Brassica napus HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
C02p10040 Brassica napus HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
BolC2t06906H Brassica oleracea HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
BolC3t13524H Brassica oleracea HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
BraA02t05460Z Brassica rapa HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
BraA03t10221Z Brassica rapa HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
Thhalv10013373m.g Eutrema salsugineum HOM05D004591 ORTHO05D005749 3.4e-14 80.9 46 76.1
AT5G18580 Arabidopsis thaliana HOM05D004591 ORTHO05D005749 4.4e-14 80.5 46 76.1
Sp6g25750 Schrenkiella parvula HOM05D004591 ORTHO05D005749 4.4e-14 80.5 46 76.1
Carub.0006s1686 Capsella rubella HOM05D004591 ORTHO05D005749 5.7e-14 80.1 53 69.8
HanXRQChr06g0174301 Helianthus annuus HOM05D004591 ORTHO05D005749 5.7e-14 80.1 50 68.0
THA.LOC104818847 Tarenaya hassleriana HOM05D004591 ORTHO05D005749 7.5e-14 79.7 46 73.9
CARHR194440 Cardamine hirsuta HOM05D004591 ORTHO05D005749 9.8e-14 79.3 46 73.9
Aa31LG11G11040 Aethionema arabicum HOM05D004591 ORTHO05D005749 1.3e-13 79.0 46 71.7
BcaC04g18665 Brassica carinata HOM05D004591 ORTHO05D005749 1.7e-13 78.6 46 73.9
C09p57910 Brassica napus HOM05D004591 ORTHO05D005749 1.7e-13 78.6 46 73.9
BolC9t58658H Brassica oleracea HOM05D004591 ORTHO05D005749 1.7e-13 78.6 46 73.9
Lsat_1_v5_gn_3_27301 Lactuca sativa HOM05D004591 ORTHO05D005749 2.2e-13 78.2 49 67.3
Mapoly0035s0147 Marchantia polymorpha HOM05D004591 ORTHO05D005749 4.9e-13 77.0 53 62.3
AUR62043784 Chenopodium quinoa HOM05D004591 ORTHO05D005749 4.5e-11 70.5 44 70.5
CBR_g7999 Chara braunii HOM05D004591 ORTHO05D005749 1.7e-10 68.6 46 63.0
Ca_21537_v3 Cicer arietinum L. HOM05D004591 ORTHO05D005749 9.8e-06 52.8 33 69.7
ECA240G1474 Erigeron canadensis HOM05D004591 ORTHO05D005749 9.8e-06 52.8 31 67.7


User provided reference genes

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