Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0217G028 Amborella trichopoda HOM05D009246 ORTHO05D011192 9.7e-52 206.5 99 100.0
ATR0564G426 Amborella trichopoda HOM05D009246 ORTHO05D011192 7.3e-31 137.1 102 68.6
ATR0661G360 Amborella trichopoda HOM05D009246 ORTHO05D011192 4.4e-28 127.9 102 64.7
ATR0326G007 Amborella trichopoda HOM05D009246 ORTHO05D011192 7.5e-28 127.1 81 76.5
ATR0697G233 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.7e-27 125.9 81 77.8
ATR0284G002 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.3e-24 116.3 89 67.4
ATR0564G504 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.7e-24 115.9 89 66.3
ATR0752G113 Amborella trichopoda HOM05D009246 ORTHO05D011192 2.6e-20 102.1 66 75.8
ATR0794G097 Amborella trichopoda HOM05D009246 ORTHO05D011192 9.2e-18 93.6 69 69.6
ATR0721G083 Amborella trichopoda HOM05D009246 ORTHO05D011192 5.0e-16 87.8 55 74.5
ATR0929G006 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.9e-15 85.9 53 73.6
ATR0827G151 Amborella trichopoda HOM05D009246 ORTHO05D011192 3.6e-14 81.6 53 71.7
ATR0624G090 Amborella trichopoda HOM05D009246 ORTHO05D011192 4.4e-12 74.7 81 50.6
ATR0215G009 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.3e-11 73.2 68 57.4
ATR0923G003 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.9e-10 69.3 79 43.0
ATR1098G111 Amborella trichopoda HOM05D000665 ORTHO05D011192 5.4e-10 67.8 83 44.6
ATR0807G051 Amborella trichopoda HOM05D000665 ORTHO05D011192 2.7e-09 65.5 84 39.3
Lj7C736T17 Lonicera japonica HOM05D000665 ORTHO05D000140 3.0e-08 62.0 92 37.0
AT2G24960 Arabidopsis thaliana HOM05D000665 ORTHO05D000140 3.9e-08 61.6 101 37.6
Dinv10284 Davidia involucrata HOM05D000665 ORTHO05D000140 3.9e-08 61.6 92 37.0
CSS0011103 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 5.1e-08 61.2 92 35.9
Manes.16G131100 Manihot esculenta HOM05D000665 ORTHO05D000140 5.1e-08 61.2 92 37.0
ATR0724G093 Amborella trichopoda HOM05D000665 ORTHO05D011192 1.1e-07 60.1 102 34.3
ATR0752G047 Amborella trichopoda HOM05D009246 ORTHO05D011192 1.1e-07 60.1 81 45.7
COL.COLO4_18963 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.1e-07 60.1 85 40.0
CiPaw.07G231300 Carya illinoinensis HOM05D000665 ORTHO05D000140 1.5e-07 59.7 80 40.0
Oeu021910.1 Olea europaea HOM05D000665 ORTHO05D000140 1.5e-07 59.7 92 39.1
QL02p018541 Quercus lobata HOM05D000665 ORTHO05D000140 1.5e-07 59.7 91 37.4
MD15G1042400 Malus domestica HOM05D000665 ORTHO05D000140 1.9e-07 59.3 81 39.5
QL03p004678 Quercus lobata HOM05D000665 ORTHO05D000140 1.9e-07 59.3 99 33.3
TAR383G0921 Trochodendron aralioides HOM05D000665 ORTHO05D000140 1.9e-07 59.3 92 34.8
QL03p004820 Quercus lobata HOM05D000665 ORTHO05D000140 3.3e-07 58.5 99 33.3
Cpa.g.sc148.33 Carica papaya HOM05D000665 ORTHO05D000140 5.6e-07 57.8 92 35.9
Dinv26864 Davidia involucrata HOM05D000665 ORTHO05D000140 5.6e-07 57.8 70 40.0
Nn3g19280 Nelumbo nucifera HOM05D000665 ORTHO05D000140 5.6e-07 57.8 106 35.8
AL4G16040 Arabidopsis lyrata HOM05D000665 ORTHO05D000140 7.3e-07 57.4 78 39.7
BcaB06g28022 Brassica carinata HOM05D000665 ORTHO05D000140 7.3e-07 57.4 78 41.0
COL.COLO4_23291 Corchorus olitorius HOM05D000665 ORTHO05D000140 7.3e-07 57.4 75 40.0
Sp4g03950 Schrenkiella parvula HOM05D000665 ORTHO05D000140 7.3e-07 57.4 93 35.5
Migut.A00363 Erythranthe guttata HOM05D000665 ORTHO05D000140 1.2e-06 56.6 78 42.3
Sed0012912 Sechium edule HOM05D000665 ORTHO05D000140 1.2e-06 56.6 80 37.5
Thecc.09G014200 Theobroma cacao HOM05D000665 ORTHO05D000140 1.2e-06 56.6 81 38.3
TWI59G0074 Tripterygium wilfordii HOM05D000665 ORTHO05D000140 1.2e-06 56.6 76 40.8
ATR0049G017 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.6e-06 56.2 37 62.2
Potri.006G265900 Populus trichocarpa HOM05D000665 ORTHO05D000140 1.6e-06 56.2 92 34.8
Prupe.1G395600 Prunus persica HOM05D000665 ORTHO05D000140 1.6e-06 56.2 81 37.0
Atru.chr7.2549 Acer truncatum HOM05D000665 ORTHO05D000140 2.1e-06 55.8 91 37.4
Haze_21389 Corylus avellana HOM05D000665 ORTHO05D000140 2.1e-06 55.8 91 35.2
HanXRQChr03g0084731 Helianthus annuus HOM05D000665 ORTHO05D000140 2.1e-06 55.8 89 37.1
MSTRG.25827 Avicennia marina HOM05D000665 ORTHO05D000140 2.8e-06 55.5 78 39.7
CSS0026262 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 2.8e-06 55.5 106 31.1
Carub.0004s0452 Capsella rubella HOM05D000665 ORTHO05D000140 2.8e-06 55.5 78 38.5
CiPaw.15G145500 Carya illinoinensis HOM05D000665 ORTHO05D000140 3.6e-06 55.1 99 32.3
Dinv41959 Davidia involucrata HOM05D000665 ORTHO05D000140 3.6e-06 55.1 99 32.3
Manes.11G096000 Manihot esculenta HOM05D000665 ORTHO05D000140 3.6e-06 55.1 107 30.8
Potri.004G172900 Populus trichocarpa HOM05D000665 ORTHO05D000140 3.6e-06 55.1 107 31.8
TAR636G0533 Trochodendron aralioides HOM05D000665 ORTHO05D000140 3.6e-06 55.1 93 35.5
Actinidia25828 Actinidia chinensis HOM05D000665 ORTHO05D000140 4.7e-06 54.7 83 39.8
A04p19300 Brassica napus HOM05D000665 ORTHO05D000140 4.7e-06 54.7 78 38.5
Haze_20106 Corylus avellana HOM05D000665 ORTHO05D000140 4.7e-06 54.7 106 35.8
Sabra06G0208500 Salix brachista HOM05D000665 ORTHO05D000140 4.7e-06 54.7 92 34.8
GSVIVG01024053001 Vitis vinifera HOM05D000665 ORTHO05D000140 4.7e-06 54.7 107 31.8
CsaV3_4G036440 Cucumis sativus L. HOM05D000665 ORTHO05D000140 6.2e-06 54.3 81 37.0
PGR044G1967 Punica granatum HOM05D000665 ORTHO05D000140 6.2e-06 54.3 91 34.1
QL11p049281 Quercus lobata HOM05D000665 ORTHO05D000140 6.2e-06 54.3 107 30.8
BcaC02g08393 Brassica carinata HOM05D000665 ORTHO05D000140 8.1e-06 53.9 78 38.5
C04p54760 Brassica napus HOM05D000665 ORTHO05D000140 8.1e-06 53.9 78 38.5
BolC4t27021H Brassica oleracea HOM05D000665 ORTHO05D000140 8.1e-06 53.9 78 38.5
BraA04t17527Z Brassica rapa HOM05D000665 ORTHO05D000140 8.1e-06 53.9 78 37.2
CARHR116760 Cardamine hirsuta HOM05D000665 ORTHO05D000140 8.1e-06 53.9 78 35.9
Duzib132G1144 Durio zibethinus HOM05D000665 ORTHO05D000140 8.1e-06 53.9 107 32.7
Duzib187G0414 Durio zibethinus HOM05D000665 ORTHO05D000140 8.1e-06 53.9 81 38.3
ECA240G4363 Erigeron canadensis HOM05D000665 ORTHO05D000140 8.1e-06 53.9 81 34.6
GSVIVG01000025001 Vitis vinifera HOM05D000665 ORTHO05D000140 8.1e-06 53.9 81 38.3


User provided reference genes

Program Settings