Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0215G019 Amborella trichopoda HOM05D048544 ORTHO05D011301 1.7e-159 565.8 267 100.0
ATR1132G094 Amborella trichopoda HOM05D048544 ORTHO05D065412 3.3e-22 109.8 78 65.4
ATR0329G034 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.8e-15 87.4 169 33.1
ATR0782G156 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.8e-15 87.4 186 33.9
ATR0584G147 Amborella trichopoda HOM05D027687 ORTHO05D066960 8.8e-15 85.1 55 74.5
ATR0100G048 Amborella trichopoda HOM05D030968 ORTHO05D011301 1.5e-14 84.3 91 46.2
ATR0827G097 Amborella trichopoda HOM05D000176 ORTHO05D011301 9.8e-14 81.6 218 28.4
ATR0171G045 Amborella trichopoda HOM05D007095 ORTHO05D008898 6.3e-13 79.0 185 30.8
ATR0314G020 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.8e-12 77.4 187 29.4
ATR0177G019 Amborella trichopoda HOM05D009392 ORTHO05D011301 1.2e-11 74.7 148 35.8
Lalb_Chr15g0080531 Lupinus albus HOM05D000176 ORTHO05D000106 2.0e-11 73.9 234 25.2
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 1.0e-10 71.6 254 24.4
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-10 71.6 254 24.4
Lalb_Chr20g0114151 Lupinus albus HOM05D000176 ORTHO05D000106 1.0e-10 71.6 234 24.8
ATR0033G029 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.3e-10 71.2 158 32.3
Lj6g0005713 Lotus japonicus HOM05D000176 ORTHO05D000106 1.3e-10 71.2 253 24.5
ATR0661G500 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.7e-10 70.9 264 26.1
arahy.Tifrunner.gnm1.ann1.B0WW5W Arachis hypogaea HOM05D000176 ORTHO05D000106 2.2e-10 70.5 234 24.4
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-10 69.7 251 25.1
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-10 69.7 251 25.1
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 5.0e-10 69.3 242 24.8
arahy.Tifrunner.gnm1.ann1.ZG7XLL Arachis hypogaea HOM05D000176 ORTHO05D000106 6.5e-10 68.9 234 23.9
vmacro12437 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 6.5e-10 68.9 323 24.1
VMungo0540G2186 Vigna mungo HOM05D000176 ORTHO05D000106 8.5e-10 68.6 234 24.4
GSVIVG01000818001 Vitis vinifera HOM05D000176 ORTHO05D000106 2.5e-09 67.0 367 21.5
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-09 66.6 252 23.8
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 4.2e-09 66.2 252 24.6
Dinv18200 Davidia involucrata HOM05D000176 ORTHO05D000106 7.2e-09 65.5 252 24.2
Duzib211G0089 Durio zibethinus HOM05D000176 ORTHO05D000106 7.2e-09 65.5 238 24.8
ATR0620G075 Amborella trichopoda HOM05D007095 ORTHO05D008898 9.4e-09 65.1 124 32.3
Ca_14624_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.4e-09 65.1 234 23.9
Gorai.001G193000 Gossypium raimondii HOM05D000176 ORTHO05D000106 9.4e-09 65.1 239 24.7
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 1.2e-08 64.7 263 23.6
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 1.2e-08 64.7 252 24.6
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-08 64.7 252 24.6
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.2e-08 64.7 252 24.6
Nitab4.5_0003663g0020 Nicotiana tabacum HOM05D000176 ORTHO05D000106 1.6e-08 64.3 252 24.6
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 1.6e-08 64.3 254 24.4
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 1.6e-08 64.3 252 24.6
HanXRQChr09g0246821 Helianthus annuus HOM05D000176 ORTHO05D000106 2.1e-08 63.9 240 22.5
Peaxi162Scf00020g02126 Petunia axillaris HOM05D000176 ORTHO05D000106 2.1e-08 63.9 255 25.9
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 2.1e-08 63.9 255 25.9
Psat5g183880 Pisum sativum HOM05D000176 ORTHO05D000106 2.1e-08 63.9 235 23.4
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 2.7e-08 63.5 240 24.2
Sed0012746 Sechium edule HOM05D000176 ORTHO05D000106 2.7e-08 63.5 234 23.1
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 3.6e-08 63.2 252 23.8
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 4.7e-08 62.8 215 25.1
ATR0602G213 Amborella trichopoda HOM05D007095 ORTHO05D008898 4.7e-08 62.8 209 26.3
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 6.1e-08 62.4 239 26.4
ATR0618G361 Amborella trichopoda HOM05D007095 ORTHO05D008898 8.0e-08 62.0 190 28.4
TPR.G1842 Trifolium pratense HOM05D000176 ORTHO05D000106 8.0e-08 62.0 234 23.9
Ciclev10025397m.g Citrus clementina HOM05D000176 ORTHO05D000106 1.0e-07 61.6 239 23.8
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 1.0e-07 61.6 242 25.6
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 1.0e-07 61.6 240 24.6
MD17G1142300 Malus domestica HOM05D000176 ORTHO05D000106 1.0e-07 61.6 234 23.9
ATR0594G014 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.4e-07 61.2 204 26.0
ATR0624G108 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.4e-07 61.2 70 40.0
MD09G1156100 Malus domestica HOM05D000176 ORTHO05D000106 1.4e-07 61.2 234 23.9
Prupe.3G169000 Prunus persica HOM05D000176 ORTHO05D000106 1.4e-07 61.2 234 23.5
Sed0026480 Sechium edule HOM05D000176 ORTHO05D000106 1.4e-07 61.2 242 24.0
C03p55310 Brassica napus HOM05D000176 ORTHO05D000106 1.8e-07 60.8 238 23.1
BolC3t17803H Brassica oleracea HOM05D000176 ORTHO05D000106 1.8e-07 60.8 238 23.1
RcHm_v2.0_Chr2g0143601 Rosa chinensis HOM05D000176 ORTHO05D000106 1.8e-07 60.8 242 25.2
Sabra02G0169600 Salix brachista HOM05D000176 ORTHO05D000106 1.8e-07 60.8 238 23.5
Lj3g0023710 Lotus japonicus HOM05D000176 ORTHO05D000106 2.3e-07 60.5 233 25.3
EL10As19g24186 Beta vulgaris HOM05D000176 ORTHO05D000106 3.0e-07 60.1 254 24.4
QL08p043592 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-07 60.1 234 22.6
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 3.0e-07 60.1 234 23.1
Atru.chr6.3553_Atru.chr6.3554 Acer truncatum HOM05D000176 ORTHO05D000106 4.0e-07 59.7 233 24.0
Ah.16g107440 Amaranthus hybridus HOM05D000176 ORTHO05D000106 4.0e-07 59.7 255 25.1
ATR0691G004 Amborella trichopoda HOM05D007095 ORTHO05D000106 4.0e-07 59.7 169 27.8
AUR62022514 Chenopodium quinoa HOM05D000176 ORTHO05D000106 4.0e-07 59.7 253 23.7
ClCG09G020530 Citrullus lanatus HOM05D000176 ORTHO05D000106 5.2e-07 59.3 248 23.0
MELO3C002881.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.2e-07 59.3 242 22.3
MELO3C019704.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.2e-07 59.3 234 23.1
CsaV3_6G015670 Cucumis sativus L. HOM05D000176 ORTHO05D000106 5.2e-07 59.3 234 23.1
ATR0686G053 Amborella trichopoda HOM05D009392 ORTHO05D012298 6.8e-07 58.9 170 28.2
AL3G42490 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 6.8e-07 58.9 238 23.5
CARHR102890 Cardamine hirsuta HOM05D000176 ORTHO05D000106 6.8e-07 58.9 238 23.5
ECA240G4387 Erigeron canadensis HOM05D000176 ORTHO05D000106 6.8e-07 58.9 237 21.1
Peaxi162Scf00613g00816 Petunia axillaris HOM05D000176 ORTHO05D000106 8.8e-07 58.5 195 25.6
QL05p010466 Quercus lobata HOM05D000176 ORTHO05D000106 8.8e-07 58.5 234 26.1
Atru.chr6.3350 Acer truncatum HOM05D000176 ORTHO05D000106 1.2e-06 58.2 238 23.1
CsaV3_5G025870 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.2e-06 58.2 242 21.9
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.2e-06 58.2 244 23.8
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 1.2e-06 58.2 234 22.6
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 1.2e-06 58.2 238 23.9
ATR0705G017 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.5e-06 57.8 94 35.1
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 1.5e-06 57.8 234 23.5
TWI36G1460 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.5e-06 57.8 238 23.5
AUR62038386 Chenopodium quinoa HOM05D000176 ORTHO05D000106 2.0e-06 57.4 253 23.7
AUR62038389 Chenopodium quinoa HOM05D000176 ORTHO05D000106 2.0e-06 57.4 253 23.7
Thhalv10002429m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 2.0e-06 57.4 238 23.5
Sp3g23470 Schrenkiella parvula HOM05D000176 ORTHO05D000106 2.0e-06 57.4 238 22.7
ATR0580G348 Amborella trichopoda HOM05D000176 ORTHO05D011301 2.6e-06 57.0 94 33.0
AT2G04865 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 2.6e-06 57.0 238 23.1
ATR1128G038 Amborella trichopoda HOM05D000176 ORTHO05D011301 5.7e-06 55.8 91 35.2
THA.LOC104808853 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 5.7e-06 55.8 41 56.1
ATR0626G254 Amborella trichopoda HOM05D007095 ORTHO05D008898 7.5e-06 55.5 87 40.2
ATR0743G249 Amborella trichopoda HOM05D007095 ORTHO05D008898 7.5e-06 55.5 93 38.7


User provided reference genes

Program Settings