Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 1.9e-237 825.5 429 100.0
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 4.6e-106 389.0 371 60.1
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 6.0e-106 388.7 372 60.5
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 2.3e-105 386.7 381 58.8
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 2.5e-104 383.3 373 57.4
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 1.6e-103 380.6 366 60.4
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 4.8e-103 379.0 374 58.3
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 8.1e-103 378.3 369 59.6
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 1.1e-102 377.9 366 57.9
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 2.4e-102 376.7 371 56.9
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 5.3e-102 375.6 367 55.6
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 1.2e-101 374.4 364 57.4
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 1.7e-100 370.5 378 57.1
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.4e-99 367.5 371 56.6
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 7.1e-99 365.2 364 56.9
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 2.1e-98 363.6 368 57.3
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 3.5e-98 362.8 375 56.3
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 3.5e-98 362.8 368 56.5
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 6.0e-98 362.1 370 55.9
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 6.0e-98 362.1 368 56.5
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 1.7e-97 360.5 372 57.0
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 2.3e-97 360.1 368 56.2
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 8.7e-97 358.2 341 58.9
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 1.1e-96 357.8 365 56.4
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 1.1e-96 357.8 369 55.8
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 7.3e-96 355.1 373 57.4
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 7.3e-96 355.1 369 55.6
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 7.3e-96 355.1 363 57.0
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 7.3e-96 355.1 413 52.8
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 1.3e-95 354.4 373 57.4
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 1.6e-95 354.0 305 60.7
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 6.2e-95 352.1 369 55.0
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 1.1e-94 351.3 380 53.4
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 1.1e-94 351.3 390 54.9
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 1.4e-94 350.9 366 56.8
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 1.8e-94 350.5 389 53.2
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 4.0e-94 349.4 361 56.5
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 2.0e-93 347.1 366 54.6
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 4.5e-93 345.9 395 52.7
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 5.8e-93 345.5 361 55.4
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 1.3e-92 344.4 342 57.0
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 1.7e-92 344.0 349 56.4
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 1.7e-92 344.0 371 55.0
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 2.2e-92 343.6 366 56.6
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 6.4e-92 342.0 366 56.3
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 6.4e-92 342.0 366 54.6
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 8.4e-92 341.7 367 55.6
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 9.3e-91 338.2 337 57.3
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 9.3e-91 338.2 294 61.6
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.6e-90 337.4 372 52.2
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 7.9e-90 335.1 371 52.3
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 1.0e-89 334.7 385 52.2
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 1.3e-89 334.3 366 54.9
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 6.7e-89 332.0 335 57.9
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.7e-89 331.6 367 55.3
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 9.6e-88 328.2 382 53.4
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.3e-87 327.8 366 54.1
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 2.8e-87 326.6 363 54.0
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.1e-86 324.7 363 52.6
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 3.1e-86 323.2 378 53.7
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 4.5e-85 319.3 339 54.3
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.7e-84 317.4 388 52.8
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 1.7e-84 317.4 350 54.6
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 2.9e-84 316.6 312 56.7
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 6.5e-84 315.5 388 51.5
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.4e-83 314.3 363 51.5
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 1.4e-83 314.3 352 51.4
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 9.3e-83 311.6 308 55.8
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 4.6e-82 309.3 302 57.6
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 7.4e-80 302.0 371 49.3
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 4.6e-74 282.7 346 47.7
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 8.7e-73 278.5 315 51.7
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 2.5e-72 276.9 261 56.3
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 7.7e-69 265.4 363 47.4
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 3.8e-68 263.1 464 39.4
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 6.5e-68 262.3 379 45.6
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 2.5e-67 260.4 371 45.6
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 5.5e-67 259.2 281 55.5
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 2.1e-66 257.3 368 43.8
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 1.4e-62 244.6 228 56.6
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 2.4e-62 243.8 199 63.3
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.3e-60 238.0 306 46.1
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 9.4e-59 231.9 376 41.0
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 1.5e-56 224.6 192 61.5
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 3.3e-56 223.4 375 41.6
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 5.7e-56 222.6 254 52.0
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 4.5e-53 213.0 186 62.4
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 8.5e-52 208.8 377 37.4
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 2.5e-51 207.2 186 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 3.0e-49 200.3 325 39.4
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.3e-46 189.5 280 43.9
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 1.3e-44 184.9 248 48.0
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 2.6e-40 170.6 208 50.5
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 3.0e-33 147.1 127 63.0
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 7.0e-30 136.0 134 54.5
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 9.5e-27 125.6 262 36.3
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 5.2e-25 119.8 103 64.1
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 5.2e-25 119.8 101 63.4
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 9.8e-24 115.5 96 60.4
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 6.3e-23 112.8 190 40.5
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 1.8e-22 111.3 103 57.3
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.5e-19 101.7 81 64.2
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 4.7e-18 96.7 328 25.6
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 7.0e-14 82.8 92 53.3
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 2.5e-11 74.3 328 26.8
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 1.2e-08 65.5 66 56.1
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 1.5e-08 65.1 55 63.6


User provided reference genes

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