Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0208G001 Amborella trichopoda HOM05D003687 ORTHO05D067511 1.2e-40 169.9 87 100.0
ATR0329G002 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.5e-22 109.8 65 86.2
ATR0553G001 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.1e-20 103.6 65 81.5
BcaB03g12420 Brassica carinata HOM05D003687 ORTHO05D004571 3.1e-20 102.1 65 78.5
AUR62029452 Chenopodium quinoa HOM05D003687 ORTHO05D004571 5.3e-20 101.3 65 80.0
MBI05_g22625_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 1.2e-19 100.1 65 76.9
MBI05_g40602_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 1.2e-19 100.1 65 76.9
FAN19G1222 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.6e-19 99.8 65 78.5
Phvul.003G269100 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 1.6e-19 99.8 65 76.9
TPR.G18309 Trifolium pratense HOM05D003687 ORTHO05D004571 2.0e-19 99.4 65 76.9
Carub.0007s0467 Capsella rubella HOM05D003687 ORTHO05D004571 2.7e-19 99.0 65 76.9
Ca_19449_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 2.7e-19 99.0 65 76.9
AL7G15520 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
AT4G35630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
BcaC04g22959 Brassica carinata HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
BolC9t54238H Brassica oleracea HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
Thhalv10025259m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
FvH4_1g10530 Fragaria vesca HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
Lalb_Chr16g0377261 Lupinus albus HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
Sp7g33400 Schrenkiella parvula HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
SEGI_09550 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 3.5e-19 98.6 64 79.7
THA.LOC104807434 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 76.9
VMungo1215G1127 Vigna mungo HOM05D003687 ORTHO05D004571 3.5e-19 98.6 65 75.4
Atru.chr3.957 Acer truncatum HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 75.4
Atru.chr3.969 Acer truncatum HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 75.4
Ah.03g148400 Amaranthus hybridus HOM05D003687 ORTHO05D004571 4.5e-19 98.2 64 76.6
A08p21800 Brassica napus HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 76.9
BraA08t34133Z Brassica rapa HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 76.9
CARHR243980 Cardamine hirsuta HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 76.9
MD02G1119200 Malus domestica HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 75.4
MD15G1233200 Malus domestica HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 75.4
Medtr8g074010 Medicago truncatula HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 76.9
TWI09G0502 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 4.5e-19 98.2 65 75.4
CANSAT25G3704 Cannabis sativa HOM05D003687 ORTHO05D004571 5.9e-19 97.8 65 75.4
FAN28G1596 Fragaria x ananassa HOM05D003687 ORTHO05D004571 5.9e-19 97.8 64 78.1
Aa31LG8G14900 Aethionema arabicum HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
AL3G50590 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
AT2G17630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
C09p13480 Brassica napus HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
Thhalv10023021m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
FAN23G1902 Fragaria x ananassa HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 76.9
FAN26G2468 Fragaria x ananassa HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 76.9
Lj2g0026838 Lotus japonicus HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
Lalb_Chr05g0211911 Lupinus albus HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
Manes.02G112800 Manihot esculenta HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
Psat0s1725g0080 Pisum sativum HOM05D003687 ORTHO05D004571 7.7e-19 97.4 65 75.4
BcaC01g00508 Brassica carinata HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
A09p11460 Brassica napus HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
C03p80790 Brassica napus HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
BolC3t20334H Brassica oleracea HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
BraA09t36786Z Brassica rapa HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
Carub.0003s3171 Capsella rubella HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
Ciclev10025659m.g Citrus clementina HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 73.8
Glyma.01G159800 Glycine max HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
Glyma.02G041900 Glycine max HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
Glyma.11G084400 Glycine max HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
Potri.005G099900 Populus trichocarpa HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 73.8
Rhsim10G0197900 Rhododendron simsii HOM05D003687 ORTHO05D004571 1.0e-18 97.1 64 73.4
THA.LOC104819724 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 1.0e-18 97.1 65 75.4
BcaB07g31719 Brassica carinata HOM05D003687 ORTHO05D004571 1.3e-18 96.7 65 75.4
CSS0042676 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 1.3e-18 96.7 64 76.6
Ca_24964_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 1.3e-18 96.7 65 75.4
Phvul.002G115000 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 1.3e-18 96.7 65 75.4
CDE10G0952 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 1.7e-18 96.3 65 75.4
Eucgr.I02231 Eucalyptus grandis HOM05D003687 ORTHO05D004571 1.7e-18 96.3 65 73.8
RcHm_v2.0_Chr2g0097441 Rosa chinensis HOM05D003687 ORTHO05D004571 1.7e-18 96.3 65 75.4
Sp3g30960 Schrenkiella parvula HOM05D003687 ORTHO05D004571 1.7e-18 96.3 65 73.8
TWI53G1012 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 1.7e-18 96.3 65 73.8
MELO3C013732.2 Cucumis melo HOM05D003687 ORTHO05D004571 2.2e-18 95.9 65 73.8
CsaV3_3G000370 Cucumis sativus L. HOM05D003687 ORTHO05D004571 2.2e-18 95.9 65 73.8
Gohir.A07G170700 Gossypium hirsutum HOM05D003687 ORTHO05D004571 2.2e-18 95.9 65 73.8
Gorai.001G198400 Gossypium raimondii HOM05D003687 ORTHO05D004571 2.2e-18 95.9 65 73.8
Prupe.7G180700 Prunus persica HOM05D003687 ORTHO05D004571 2.2e-18 95.9 65 73.8
ClCG10G000330 Citrullus lanatus HOM05D003687 ORTHO05D004571 2.9e-18 95.5 65 72.3
DCAR_030822 Daucus carota HOM05D003687 ORTHO05D004571 2.9e-18 95.5 64 75.0
Dinv40174 Davidia involucrata HOM05D003687 ORTHO05D004571 2.9e-18 95.5 65 73.8
QL06p052789 Quercus lobata HOM05D003687 ORTHO05D004571 2.9e-18 95.5 65 73.8
QL06p053788 Quercus lobata HOM05D003687 ORTHO05D004571 2.9e-18 95.5 65 73.8
Sabra05G0082600 Salix brachista HOM05D003687 ORTHO05D004571 2.9e-18 95.5 65 72.3
TPR.G25131 Trifolium pratense HOM05D003687 ORTHO05D004571 2.9e-18 95.5 64 75.0
CiPaw.08G180600 Carya illinoinensis HOM05D003687 ORTHO05D004571 3.8e-18 95.1 65 70.8
ECA233G3718 Erigeron canadensis HOM05D003687 ORTHO05D004571 3.8e-18 95.1 64 75.0
Lsat_1_v5_gn_8_23040 Lactuca sativa HOM05D003687 ORTHO05D004571 3.8e-18 95.1 64 73.4
unitig_699.g19680 Utricularia gibba HOM05D003687 ORTHO05D004571 3.8e-18 95.1 64 73.4
Actinidia17383 Actinidia chinensis HOM05D003687 ORTHO05D004571 5.0e-18 94.7 65 70.8
Psat2g150440 Pisum sativum HOM05D003687 ORTHO05D004571 5.0e-18 94.7 64 75.0
Thecc.01G007000 Theobroma cacao HOM05D003687 ORTHO05D004571 5.0e-18 94.7 65 70.8
COL.COLO4_22538 Corchorus olitorius HOM05D003687 ORTHO05D004571 6.5e-18 94.4 65 69.2
Manes.01G153800 Manihot esculenta HOM05D003687 ORTHO05D004571 6.5e-18 94.4 64 73.4
Sed0005072 Sechium edule HOM05D003687 ORTHO05D004571 8.5e-18 94.0 65 70.8
Hma1.2p1_2491F.1_g323220 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 1.1e-17 93.6 64 73.4
Lalb_Chr09g0321291 Lupinus albus HOM05D003687 ORTHO05D004571 1.1e-17 93.6 65 72.3
PGR119G1501 Punica granatum HOM05D003687 ORTHO05D004571 1.1e-17 93.6 65 73.8
TAR628G0600 Trochodendron aralioides HOM05D003687 ORTHO05D004571 1.1e-17 93.6 64 73.4
Cfa007065 Carpinus fangiana HOM05D003687 ORTHO05D004571 1.5e-17 93.2 65 69.2
CiPaw.07G004000 Carya illinoinensis HOM05D003687 ORTHO05D004571 1.5e-17 93.2 65 72.3
Gohir.D07G177500 Gossypium hirsutum HOM05D003687 ORTHO05D004571 1.5e-17 93.2 65 72.3
Nitab4.5_0002967g0020 Nicotiana tabacum HOM05D003687 ORTHO05D004571 1.5e-17 93.2 65 72.3
Sc07g0001320 Simmondsia chinensis HOM05D003687 ORTHO05D004571 1.5e-17 93.2 65 70.8
VMungo0251G3174 Vigna mungo HOM05D003687 ORTHO05D004571 1.5e-17 93.2 64 71.9
Hma1.2p1_0300F.1_g118150 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 1.9e-17 92.8 64 73.4
Peaxi162Scf01446g00005 Petunia axillaris HOM05D003687 ORTHO05D004571 1.9e-17 92.8 65 73.8
CSS0005640 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 2.5e-17 92.4 64 70.3
Cpa.g.sc535.4 Carica papaya HOM05D003687 ORTHO05D004571 2.5e-17 92.4 64 70.3
Duzib147G1246 Durio zibethinus HOM05D003687 ORTHO05D004571 3.2e-17 92.0 65 70.8
Duzib264G0784 Durio zibethinus HOM05D003687 ORTHO05D004571 3.2e-17 92.0 65 69.2
Lj4P233T12 Lonicera japonica HOM05D003687 ORTHO05D004571 3.2e-17 92.0 64 71.9
Nitab4.5_0000702g0080 Nicotiana tabacum HOM05D003687 ORTHO05D004571 3.2e-17 92.0 65 72.3
Oeu028610.1 Olea europaea HOM05D003687 ORTHO05D004571 3.2e-17 92.0 64 71.9
PSO339G2900 Papaver somniferum HOM05D003687 ORTHO05D004571 3.2e-17 92.0 65 70.8
Solyc02g082830.3 Solanum lycopersicum HOM05D003687 ORTHO05D004571 3.2e-17 92.0 64 73.4
Sopen02g027630 Solanum pennellii HOM05D003687 ORTHO05D004571 3.2e-17 92.0 64 73.4
PGSC0003DMG400001524 Solanum tuberosum HOM05D003687 ORTHO05D004571 3.2e-17 92.0 64 73.4
CAN.G890.77 Capsicum annuum HOM05D003687 ORTHO05D004571 4.2e-17 91.7 64 73.4
Haze_03674 Corylus avellana HOM05D003687 ORTHO05D004571 4.2e-17 91.7 65 67.7
PSO063G5755 Papaver somniferum HOM05D003687 ORTHO05D004571 7.2e-17 90.9 65 69.2
SalBow3G3833 Salvia bowleyana HOM05D003687 ORTHO05D004571 7.2e-17 90.9 64 70.3
SGA_v2.0_scaffold2G00959 Striga asiatica HOM05D003687 ORTHO05D004571 9.4e-17 90.5 64 70.3
HPP92_002248 Vanilla planifolia HOM05D003687 ORTHO05D004571 9.4e-17 90.5 64 70.3
SGA_v2.0_scaffold108G30984 Striga asiatica HOM05D003687 ORTHO05D004571 1.2e-16 90.1 64 70.3
Mapoly0033s0118 Marchantia polymorpha HOM05D003687 ORTHO05D004571 1.6e-16 89.7 66 66.7
BcaB07g31718 Brassica carinata HOM05D003687 ORTHO05D004571 2.1e-16 89.4 65 70.8
Migut.H02194 Erythranthe guttata HOM05D003687 ORTHO05D004571 2.7e-16 89.0 64 70.3
TAR376G1076 Trochodendron aralioides HOM05D003687 ORTHO05D004571 2.7e-16 89.0 64 70.3
MSTRG.3621 Avicennia marina HOM05D003687 ORTHO05D004571 3.6e-16 88.6 64 67.2
Cc07_g11670 Coffea canephora HOM05D003687 ORTHO05D004571 4.7e-16 88.2 64 68.8
Aa31LG6G12590 Aethionema arabicum HOM05D003687 ORTHO05D004571 1.4e-15 86.7 64 68.8
Aqoxy1G00525 Aquilegia oxysepala HOM05D003687 ORTHO05D004571 1.8e-15 86.3 61 72.1
SMO259G0019 Selaginella moellendorffii HOM05D003687 ORTHO05D004571 1.8e-15 86.3 64 64.1
SHI29483 Sapria himalayana HOM05D003687 ORTHO05D004571 2.3e-15 85.9 65 66.2
CBR_g34176 Chara braunii HOM05D003687 ORTHO05D004571 6.8e-15 84.3 66 63.6
Os03g0157900 Oryza sativa ssp. japonica HOM05D003687 ORTHO05D004571 6.8e-15 84.3 65 67.7
Zm00001eb004390 Zea mays HOM05D003687 ORTHO05D004571 6.8e-15 84.3 65 67.7
BraA06t26310Z Brassica rapa HOM05D003687 ORTHO05D043272 8.8e-15 84.0 81 61.7
Dinv18127 Davidia involucrata HOM05D003687 ORTHO05D043272 1.5e-14 83.2 63 69.8
CBR_g54970 Chara braunii HOM05D003687 ORTHO05D004571 2.0e-14 82.8 66 62.1
QL06p053814 Quercus lobata HOM05D003687 ORTHO05D004571 2.6e-14 82.4 62 71.0
Cre07.g331550 Chlamydomonas reinhardtii HOM05D003687 ORTHO05D004571 4.4e-14 81.6 66 63.6
Pp3c9_15390 Physcomitrium patens HOM05D003687 ORTHO05D004571 9.8e-14 80.5 61 65.6
EL10Ac6g15469 Beta vulgaris HOM05D003687 ORTHO05D004571 1.7e-13 79.7 53 77.4
QL06p053818 Quercus lobata HOM05D003687 ORTHO05D004571 2.8e-13 79.0 60 70.0
GSVIVG01006497001 Vitis vinifera HOM05D003687 ORTHO05D004571 2.8e-13 79.0 54 70.4
PRCOL_00000472 Prasinoderma coloniale HOM05D003687 ORTHO05D004571 8.3e-13 77.4 65 58.5
QL06p052757 Quercus lobata HOM05D003687 ORTHO05D004571 1.1e-12 77.0 64 64.1
CDE10G0671 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 1.4e-12 76.6 59 67.8
QL06p052765 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-12 76.3 61 68.9
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 2.4e-12 75.9 69 56.5
arahy.Tifrunner.gnm1.ann1.XW297T Arachis hypogaea HOM05D003687 ORTHO05D004571 2.0e-11 72.8 51 72.5
arahy.Tifrunner.gnm1.ann1.ZVTH8F Arachis hypogaea HOM05D003687 ORTHO05D004571 2.0e-11 72.8 51 72.5
MCO11G731 Micromonas commoda HOM05D003687 ORTHO05D004571 1.7e-10 69.7 63 61.9
FAN26G0112 Fragaria x ananassa HOM05D003687 ORTHO05D004571 8.6e-10 67.4 49 71.4
SEGI_08881 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 1.2e-06 57.0 44 63.6
ATR0329G021 Amborella trichopoda HOM05D003687 ORTHO05D004571 9.8e-06 53.9 39 71.8


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