Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0197G001 Amborella trichopoda HOM05D002473 ORTHO05D002666 7.2e-44 180.3 95 100.0
ATR0508G001 Amborella trichopoda HOM05D002473 ORTHO05D002666 3.9e-42 174.5 95 97.9
ATR0620G053 Amborella trichopoda HOM05D002473 ORTHO05D002666 3.7e-40 167.9 95 93.7
PGR042G3103 Punica granatum HOM05D002473 ORTHO05D002666 8.0e-11 70.5 76 52.6
MBI19_g04825_MAGBIO Magnolia biondii HOM05D002473 ORTHO05D002666 1.2e-09 66.6 60 63.3
BraA01t01870Z Brassica rapa HOM05D002473 ORTHO05D002666 5.7e-09 64.3 85 47.1
BcaNung01616 Brassica carinata HOM05D002473 ORTHO05D002666 7.5e-09 63.9 90 43.3
Cpa.g.sc3.193 Carica papaya HOM05D002473 ORTHO05D002666 7.5e-09 63.9 61 52.5
BcaC09g50532 Brassica carinata HOM05D002473 ORTHO05D002666 1.3e-08 63.2 90 43.3
A01p19290 Brassica napus HOM05D002473 ORTHO05D002666 1.3e-08 63.2 90 43.3
C01p24240 Brassica napus HOM05D002473 ORTHO05D002666 1.3e-08 63.2 90 43.3
BolC1t02380H Brassica oleracea HOM05D002473 ORTHO05D002666 1.3e-08 63.2 90 43.3
Sp7g25840 Schrenkiella parvula HOM05D002473 ORTHO05D002666 1.7e-08 62.8 90 42.2
SEGI_11548 Sequoiadendron giganteum HOM05D002473 ORTHO05D002666 2.2e-08 62.4 60 55.0
RcHm_v2.0_Chr6g0284141 Rosa chinensis HOM05D002473 ORTHO05D002666 8.3e-08 60.5 63 50.8
CSS0046818 Camellia sinensis var. sinensis HOM05D002473 ORTHO05D002666 1.1e-07 60.1 64 48.4
FvH4_2g18580 Fragaria vesca HOM05D002473 ORTHO05D002666 1.8e-07 59.3 64 50.0
FAN24G0567 Fragaria x ananassa HOM05D002473 ORTHO05D002666 1.8e-07 59.3 64 50.0
VMungo0331G1378 Vigna mungo HOM05D002473 ORTHO05D002666 1.8e-07 59.3 85 41.2
AT4G27870 Arabidopsis thaliana HOM05D002473 ORTHO05D002666 2.4e-07 58.9 85 45.9
FAN27G2635 Fragaria x ananassa HOM05D002473 ORTHO05D002666 2.4e-07 58.9 64 50.0
Actinidia34292 Actinidia chinensis HOM05D002473 ORTHO05D002666 3.1e-07 58.5 64 50.0
Thhalv10024497m.g Eutrema salsugineum HOM05D002473 ORTHO05D002666 3.1e-07 58.5 90 38.9
TAR374G0959 Trochodendron aralioides HOM05D002473 ORTHO05D002666 3.1e-07 58.5 60 51.7
A03p57550 Brassica napus HOM05D002473 ORTHO05D002666 4.1e-07 58.2 91 40.7
RcHm_v2.0_Chr6g0284151 Rosa chinensis HOM05D002473 ORTHO05D002666 4.1e-07 58.2 72 45.8
Actinidia30056 Actinidia chinensis HOM05D002473 ORTHO05D002666 5.4e-07 57.8 77 42.9
PSO063G6136 Papaver somniferum HOM05D002473 ORTHO05D002666 5.4e-07 57.8 74 51.4
Aqoxy5G04405 Aquilegia oxysepala HOM05D002473 ORTHO05D002666 7.0e-07 57.4 75 49.3
AL7G24770 Arabidopsis lyrata HOM05D002473 ORTHO05D002666 7.0e-07 57.4 85 44.7
BcaC06g32657 Brassica carinata HOM05D002473 ORTHO05D002666 7.0e-07 57.4 90 38.9
CARHR235570 Cardamine hirsuta HOM05D002473 ORTHO05D002666 7.0e-07 57.4 77 42.9
Prupe.8G199300 Prunus persica HOM05D002473 ORTHO05D002666 7.0e-07 57.4 65 49.2
Actinidia08725 Actinidia chinensis HOM05D002473 ORTHO05D002666 9.2e-07 57.0 64 50.0
BolC7t46055H Brassica oleracea HOM05D002473 ORTHO05D002666 9.2e-07 57.0 90 40.0
CsaV3_7G026400 Cucumis sativus L. HOM05D002473 ORTHO05D002666 9.2e-07 57.0 68 51.5
QL09p051502 Quercus lobata HOM05D002473 ORTHO05D002666 9.2e-07 57.0 65 50.8
A03p57560 Brassica napus HOM05D002473 ORTHO05D002666 1.2e-06 56.6 90 37.8
BraA03t14823Z Brassica rapa HOM05D002473 ORTHO05D002666 1.2e-06 56.6 90 37.8
PSO782G1712 Papaver somniferum HOM05D002473 ORTHO05D002666 1.2e-06 56.6 83 44.6
THA.LOC104811916 Tarenaya hassleriana HOM05D002473 ORTHO05D002666 1.2e-06 56.6 66 50.0
Atru.chr12.2512 Acer truncatum HOM05D002473 ORTHO05D002666 1.6e-06 56.2 64 48.4
Atru.ctg794.6 Acer truncatum HOM05D002473 ORTHO05D002666 1.6e-06 56.2 64 48.4
Phvul.010G021600 Phaseolus vulgaris HOM05D002473 ORTHO05D002666 1.6e-06 56.2 77 41.6
RcHm_v2.0_Chr6g0284131 Rosa chinensis HOM05D002473 ORTHO05D002666 1.6e-06 56.2 63 47.6
Dinv19176 Davidia involucrata HOM05D002473 ORTHO05D002666 2.0e-06 55.8 66 45.5
Eucgr.A00980 Eucalyptus grandis HOM05D002473 ORTHO05D002666 2.0e-06 55.8 68 47.1
Eucgr.A00981 Eucalyptus grandis HOM05D002473 ORTHO05D002666 2.0e-06 55.8 68 47.1
FAN27G0137 Fragaria x ananassa HOM05D002473 ORTHO05D002666 2.7e-06 55.5 63 47.6
HanXRQChr10g0279501 Helianthus annuus HOM05D002473 ORTHO05D002666 2.7e-06 55.5 67 50.7
QL09p051285 Quercus lobata HOM05D002473 ORTHO05D002666 2.7e-06 55.5 66 50.0
Atru.ctg794.3 Acer truncatum HOM05D002473 ORTHO05D002666 3.5e-06 55.1 64 46.9
CSS0043654 Camellia sinensis var. sinensis HOM05D002473 ORTHO05D002666 3.5e-06 55.1 66 43.9
Lalb_Chr12g0209901 Lupinus albus HOM05D002473 ORTHO05D002666 3.5e-06 55.1 79 43.0
Nn3g18727 Nelumbo nucifera HOM05D002473 ORTHO05D002666 3.5e-06 55.1 70 45.7
BcaC06g32659 Brassica carinata HOM05D002473 ORTHO05D002666 4.5e-06 54.7 89 39.3
C07p55770 Brassica napus HOM05D002473 ORTHO05D002666 4.5e-06 54.7 90 37.8
CSS0007068 Camellia sinensis var. sinensis HOM05D002473 ORTHO05D002666 4.5e-06 54.7 60 51.7
CiPaw.02G023300 Carya illinoinensis HOM05D002473 ORTHO05D002666 4.5e-06 54.7 66 45.5
MELO3C021085.2 Cucumis melo HOM05D002473 ORTHO05D002666 4.5e-06 54.7 71 47.9
Duzib084G1402 Durio zibethinus HOM05D002473 ORTHO05D002666 4.5e-06 54.7 68 44.1
FAN24G3132 Fragaria x ananassa HOM05D002473 ORTHO05D002666 4.5e-06 54.7 63 46.0
Thecc.03G212700 Theobroma cacao HOM05D002473 ORTHO05D002666 4.5e-06 54.7 71 42.3
C07p55780 Brassica napus HOM05D002473 ORTHO05D002666 5.9e-06 54.3 90 40.0
BolC7t46056H Brassica oleracea HOM05D002473 ORTHO05D002666 5.9e-06 54.3 90 40.0
Haze_15256 Corylus avellana HOM05D002473 ORTHO05D002666 5.9e-06 54.3 60 51.7
Gorai.008G262700 Gossypium raimondii HOM05D002473 ORTHO05D002666 5.9e-06 54.3 68 42.6
GSVIVG01005224001 Vitis vinifera HOM05D002473 ORTHO05D002666 5.9e-06 54.3 66 51.5
MD10G1160200 Malus domestica HOM05D002473 ORTHO05D002666 7.8e-06 53.9 67 44.8
Manes.12G047100 Manihot esculenta HOM05D002473 ORTHO05D002666 7.8e-06 53.9 60 53.3
Medtr8g012900 Medicago truncatula HOM05D002473 ORTHO05D002666 7.8e-06 53.9 68 42.6


User provided reference genes

Program Settings