Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0194G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.1e-195 684.5 334 100.0
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.1e-175 619.0 334 90.7
ATR0661G336 Amborella trichopoda HOM05D004345 ORTHO05D005192 6.8e-174 614.0 334 91.0
ATR0792G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 5.6e-144 514.6 277 91.3
ATR0964G004 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.8e-143 511.5 277 91.0
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.7e-111 405.6 218 91.3
ATR0560G003 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.7e-95 353.6 193 89.6
ATR1192G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 8.0e-82 308.1 164 92.7
ATR0560G006 Amborella trichopoda HOM05D004345 ORTHO05D005192 7.6e-32 142.1 74 91.9
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 1.4e-22 111.3 304 31.2
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.3e-18 98.2 315 27.0
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 2.9e-15 87.0 317 27.8
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 5.0e-15 86.3 257 31.5
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 9.3e-14 82.0 279 27.2
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 1.2e-13 81.6 306 25.5
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.2e-13 81.6 306 25.2
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 2.1e-13 80.9 321 28.7
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 2.7e-13 80.5 304 27.0
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 3.6e-13 80.1 182 30.2
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 7.9e-13 79.0 304 25.3
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 1.0e-12 78.6 249 28.1
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 1.3e-12 78.2 310 24.5
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 1.3e-12 78.2 307 24.8
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.3e-12 77.4 306 24.8
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 3.0e-12 77.0 305 27.5
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 3.9e-12 76.6 299 27.1
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 6.7e-12 75.9 306 24.5
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 8.7e-12 75.5 255 28.2
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 2.5e-11 73.9 250 30.0
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 3.3e-11 73.6 258 27.1
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 4.3e-11 73.2 301 27.6
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 4.3e-11 73.2 301 27.6
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 5.7e-11 72.8 308 27.9
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 5.7e-11 72.8 258 29.5
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 7.4e-11 72.4 258 27.9
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.3e-10 71.6 255 27.5
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 2.2e-10 70.9 306 28.1
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 2.2e-10 70.9 262 27.9
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 2.8e-10 70.5 262 23.7
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 6.3e-10 69.3 255 27.8
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 8.2e-10 68.9 203 30.0
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 8.2e-10 68.9 243 26.7
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.1e-09 68.6 222 27.0
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 5.3e-09 66.2 222 27.0
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 6.9e-09 65.9 328 24.4
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 1.2e-08 65.1 320 25.0
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 2.0e-08 64.3 316 23.1
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 3.4e-08 63.5 241 29.9
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 4.5e-08 63.2 197 28.4
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 1.0e-07 62.0 305 24.9
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 1.0e-07 62.0 327 23.5
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 1.7e-07 61.2 245 23.7
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 3.8e-07 60.1 204 27.5
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 3.2e-06 57.0 264 25.4
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 5.5e-06 56.2 265 25.7


User provided reference genes

Program Settings