Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.7e-226 788.5 449 100.0
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 4.1e-81 306.2 418 42.8
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 9.1e-73 278.5 396 39.9
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 1.6e-72 277.7 435 38.9
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 2.0e-72 277.3 415 44.3
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 5.9e-72 275.8 456 37.3
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 5.9e-72 275.8 418 39.2
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 7.7e-72 275.4 399 40.1
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.0e-71 275.0 429 39.9
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.0e-71 275.0 434 38.2
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.7e-71 274.2 439 39.2
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 5.0e-71 272.7 420 38.3
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.5e-70 271.2 412 38.6
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 4.2e-70 269.6 424 39.9
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 7.2e-70 268.9 419 40.3
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 9.5e-70 268.5 419 40.3
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 1.2e-69 268.1 438 38.6
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 6.1e-69 265.8 442 36.2
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 8.0e-69 265.4 463 37.1
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 5.2e-68 262.7 446 37.2
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 6.8e-68 262.3 427 36.8
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 8.9e-68 261.9 435 37.0
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.5e-67 261.2 438 37.4
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 2.6e-67 260.4 438 38.1
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 4.4e-67 259.6 444 35.1
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.7e-66 256.5 430 36.3
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.9e-66 256.1 411 38.4
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 4.9e-66 256.1 457 34.8
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 6.3e-66 255.8 439 36.7
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 8.3e-66 255.4 437 36.6
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 8.3e-66 255.4 435 37.0
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.4e-65 254.6 448 36.4
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.4e-65 254.6 143 91.6
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.4e-65 253.8 431 35.7
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 4.1e-65 253.1 419 37.7
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.1e-65 253.1 430 36.7
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 9.2e-65 251.9 451 36.8
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.2e-64 251.5 440 36.1
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 1.6e-64 251.1 402 36.6
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 4.5e-64 249.6 434 35.9
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 7.8e-64 248.8 426 37.3
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 1.0e-63 248.4 414 41.3
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.7e-63 247.7 394 37.1
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 2.3e-63 247.3 447 38.3
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.9e-63 246.9 437 37.3
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 5.0e-63 246.1 399 36.6
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 8.6e-63 245.4 429 37.3
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 8.6e-63 245.4 460 37.0
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 8.6e-63 245.4 442 34.6
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 8.6e-63 245.4 434 44.0
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 3.3e-62 243.4 440 33.6
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.3e-62 243.4 410 37.8
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 4.3e-62 243.0 436 34.6
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 5.6e-62 242.7 457 34.6
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 7.3e-62 242.3 394 37.8
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 9.5e-62 241.9 457 34.8
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 1.6e-61 241.1 457 34.6
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.8e-61 240.4 469 35.8
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 2.8e-61 240.4 454 35.2
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 2.8e-61 240.4 437 34.3
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.6e-61 240.0 440 34.5
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 4.7e-61 239.6 456 35.1
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 4.7e-61 239.6 457 34.6
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 4.7e-61 239.6 444 37.2
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 6.1e-61 239.2 447 36.2
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.0e-60 238.4 447 35.8
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.0e-60 238.4 445 35.5
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 1.0e-60 238.4 451 36.6
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.4e-60 238.0 456 34.4
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.4e-60 238.0 447 35.3
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.8e-60 237.7 423 36.6
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 6.8e-60 235.7 447 35.6
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 6.8e-60 235.7 447 35.6
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 6.8e-60 235.7 449 38.5
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 1.5e-59 234.6 440 34.1
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 3.4e-59 233.4 446 35.4
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 3.4e-59 233.4 433 34.6
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 5.8e-59 232.6 442 36.9
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 7.5e-59 232.3 451 35.9
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 9.8e-59 231.9 446 34.3
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.3e-58 231.5 459 34.2
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 4.9e-58 229.6 422 36.0
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 8.3e-58 228.8 452 33.2
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 1.1e-57 228.4 421 34.2
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 1.4e-57 228.0 451 33.5
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.9e-57 227.6 429 34.0
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 5.4e-57 226.1 442 35.7
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 1.6e-56 224.6 421 33.3
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.0e-56 224.2 439 35.5
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.7e-56 223.8 453 38.9
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 4.6e-56 223.0 461 32.5
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 6.0e-56 222.6 449 33.0
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 6.0e-56 222.6 440 33.4
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 8.6e-55 218.8 414 34.8
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 8.6e-55 218.8 450 36.9
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 1.1e-54 218.4 434 35.0
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 3.3e-54 216.9 475 32.4
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.3e-54 216.9 430 35.3
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.3e-54 216.5 443 34.5
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.3e-54 216.5 430 35.1
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 5.6e-54 216.1 372 37.4
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 9.5e-54 215.3 418 33.5
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 9.5e-54 215.3 453 37.1
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 6.2e-53 212.6 452 34.1
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 8.0e-53 212.2 489 29.0
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-52 211.5 460 31.7
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 3.1e-52 210.3 449 34.5
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 3.1e-52 210.3 455 33.2
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 6.8e-52 209.1 425 33.9
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 8.9e-52 208.8 460 38.9
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 1.5e-51 208.0 425 34.4
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 2.0e-51 207.6 460 38.7
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 5.8e-51 206.1 448 32.6
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 4.9e-50 203.0 439 38.7
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.6e-48 196.4 462 32.7
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 1.3e-47 194.9 455 33.0
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.3e-47 194.9 459 32.9
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 1.5e-46 191.4 385 34.3
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 3.4e-43 180.3 393 32.8
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 5.8e-43 179.5 445 29.2
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.7e-42 176.8 424 32.8
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.9e-42 176.4 273 36.3
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 6.4e-42 176.0 432 39.1
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 4.1e-41 173.3 453 29.6
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 2.5e-38 164.1 425 30.6
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 2.1e-37 161.0 448 30.4
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 3.6e-37 160.2 325 33.2
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 5.2e-36 156.4 447 29.8
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 2.0e-35 154.5 333 35.1
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.3e-34 151.8 198 43.4
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 3.2e-33 147.1 145 55.2
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 1.6e-29 134.8 451 27.1
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 6.2e-29 132.9 143 46.9
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.4e-28 131.0 180 40.6
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 3.4e-27 127.1 187 41.2
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 1.6e-24 118.2 416 25.5
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.0e-23 115.5 418 25.4
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 4.3e-22 110.2 136 44.1
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.8e-21 107.5 192 36.5
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 8.1e-21 105.9 135 40.0
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 1.7e-18 98.2 142 37.3
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.1e-16 91.3 176 36.4
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 7.9e-16 89.4 456 23.0
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.8e-15 88.2 112 42.9
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.3e-15 87.8 436 22.5
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.0e-15 87.4 111 41.4
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.3e-14 83.6 109 42.2
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 1.6e-13 81.6 141 35.5
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 1.1e-12 79.0 436 22.2
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 1.2e-11 75.5 122 36.9
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 4.5e-11 73.6 85 47.1
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.8e-10 70.5 116 37.1
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 4.9e-10 70.1 73 47.9
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.1e-09 68.9 134 35.8
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 1.1e-09 68.9 171 28.1
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.4e-09 68.6 73 46.6
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 3.5e-08 63.9 153 21.6
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 7.4e-06 56.2 98 33.7


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