Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.6e-58 228.4 109 100.0
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 3.4e-50 201.4 108 89.8
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 1.4e-46 189.5 108 82.4
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 1.5e-45 186.0 108 81.5
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 5.7e-45 184.1 108 80.6
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 5.7e-45 184.1 108 80.6
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 9.7e-45 183.3 108 80.6
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 2.2e-44 182.2 108 78.7
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 2.8e-44 181.8 108 79.6
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 4.8e-44 181.0 108 78.7
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 4.8e-44 181.0 108 78.7
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 6.3e-44 180.6 108 77.8
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 6.3e-44 180.6 108 78.7
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 1.4e-43 179.5 108 78.7
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 1.8e-43 179.1 108 78.7
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 1.8e-43 179.1 108 78.7
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 4.1e-43 177.9 108 77.8
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 4.1e-43 177.9 108 77.8
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 4.1e-43 177.9 108 77.8
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 5.3e-43 177.6 108 76.9
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 5.3e-43 177.6 107 77.6
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 7.0e-43 177.2 108 76.9
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 9.1e-43 176.8 107 77.6
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 1.2e-42 176.4 108 75.9
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 1.2e-42 176.4 108 76.9
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 1.2e-42 176.4 108 76.9
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 1.2e-42 176.4 108 76.9
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 3.5e-42 174.9 108 75.0
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 4.5e-42 174.5 108 75.9
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 4.5e-42 174.5 108 75.9
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 4.5e-42 174.5 108 75.9
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 4.5e-42 174.5 108 74.1
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 4.5e-42 174.5 108 75.9
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 5.9e-42 174.1 108 75.0
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 5.9e-42 174.1 107 75.7
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 7.7e-42 173.7 108 75.9
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 7.7e-42 173.7 108 75.9
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 1.0e-41 173.3 108 75.9
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 1.0e-41 173.3 108 75.9
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 1.0e-41 173.3 108 75.9
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 1.3e-41 172.9 107 75.7
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 1.3e-41 172.9 108 75.0
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 1.3e-41 172.9 108 75.0
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 1.3e-41 172.9 108 75.0
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 1.3e-41 172.9 107 76.6
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 1.7e-41 172.6 108 74.1
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 1.7e-41 172.6 108 75.9
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 2.2e-41 172.2 108 75.0
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 2.2e-41 172.2 108 75.9
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 2.2e-41 172.2 108 75.0
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 3.8e-41 171.4 107 75.7
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 3.8e-41 171.4 108 74.1
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 3.8e-41 171.4 108 74.1
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 3.8e-41 171.4 108 74.1
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 3.8e-41 171.4 108 73.1
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 3.8e-41 171.4 108 73.1
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 3.8e-41 171.4 108 75.9
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 75.0
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 72.2
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 72.2
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 72.2
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 72.2
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 72.2
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 5.0e-41 171.0 107 74.8
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 5.0e-41 171.0 108 72.2
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 6.5e-41 170.6 108 74.1
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 6.5e-41 170.6 108 73.1
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 8.5e-41 170.2 108 74.1
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 1.1e-40 169.9 108 74.1
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 1.1e-40 169.9 108 73.1
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 1.5e-40 169.5 108 73.1
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 1.9e-40 169.1 108 75.0
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 1.9e-40 169.1 108 73.1
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 1.9e-40 169.1 108 72.2
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 1.9e-40 169.1 108 74.1
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 1.9e-40 169.1 108 74.1
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.9e-40 169.1 108 73.1
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 2.5e-40 168.7 108 73.1
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 2.5e-40 168.7 108 72.2
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 2.5e-40 168.7 107 73.8
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 3.2e-40 168.3 108 72.2
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 3.2e-40 168.3 108 73.1
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 5.5e-40 167.5 109 72.5
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 5.5e-40 167.5 109 72.5
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 5.5e-40 167.5 109 72.5
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 5.5e-40 167.5 109 72.5
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 5.5e-40 167.5 109 72.5
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 5.5e-40 167.5 109 73.4
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 5.5e-40 167.5 108 71.3
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 5.5e-40 167.5 108 73.1
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 9.4e-40 166.8 108 72.2
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 1.2e-39 166.4 109 71.6
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 1.2e-39 166.4 109 72.5
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 1.2e-39 166.4 109 71.6
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.6e-39 166.0 109 71.6
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 1.6e-39 166.0 109 72.5
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 2.7e-39 165.2 109 71.6
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 3.6e-39 164.9 108 71.3
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 4.7e-39 164.5 108 72.2
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 4.7e-39 164.5 108 72.2
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 1.0e-38 163.3 108 69.4
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.0e-38 163.3 108 71.3
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 2.6e-37 158.7 98 74.5
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 5.7e-37 157.5 109 68.8
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 7.5e-37 157.1 108 69.4
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 9.7e-37 156.8 108 67.6
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 1.3e-36 156.4 98 75.5
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 1.4e-35 152.9 108 66.7
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 7.0e-35 150.6 95 73.7
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 3.8e-33 144.8 108 59.3
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 8.0e-31 137.1 108 57.4
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 1.4e-30 136.3 108 56.5
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 3.4e-29 131.7 108 55.6
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 4.8e-28 127.9 80 75.0
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 5.9e-26 120.9 99 51.5
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 4.7e-23 111.3 106 54.7
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 5.4e-19 97.8 79 62.0
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 2.7e-10 68.9 50 68.0
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.6e-10 68.2 45 66.7
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.9e-09 65.1 108 36.1


User provided reference genes

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