Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0188G026 Amborella trichopoda HOM05D007260 ORTHO05D009149 4.4e-86 321.2 162 100.0
TAR633G2662 Trochodendron aralioides HOM05D007260 ORTHO05D009149 1.2e-30 137.1 130 52.3
Nn2g15147 Nelumbo nucifera HOM05D007260 ORTHO05D009149 3.8e-29 132.1 130 52.3
Actinidia39206 Actinidia chinensis HOM05D007260 ORTHO05D009149 6.5e-29 131.3 131 48.9
MBI13_g10219_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 1.1e-28 130.6 131 53.4
vmacro21973 Vaccinium macrocarpon HOM05D007260 ORTHO05D009149 3.6e-27 125.6 130 50.0
CANSAT80G1528 Cannabis sativa HOM05D007260 ORTHO05D009149 6.1e-27 124.8 152 43.4
CANSAT80G0389 Cannabis sativa HOM05D007260 ORTHO05D009149 1.0e-26 124.0 152 44.1
Phvul.008G158118 Phaseolus vulgaris HOM05D007260 ORTHO05D009149 1.4e-26 123.6 130 49.2
TWI74G0992 Tripterygium wilfordii HOM05D007260 ORTHO05D009149 2.3e-26 122.9 130 50.0
Medtr7g091050 Medicago truncatula HOM05D007260 ORTHO05D009149 3.0e-26 122.5 130 48.5
SalBow6G2074 Salvia bowleyana HOM05D007260 ORTHO05D009149 5.2e-26 121.7 130 46.2
SalBow6G0663 Salvia bowleyana HOM05D007260 ORTHO05D009149 1.1e-25 120.6 130 46.2
Ca_08430_v3 Cicer arietinum L. HOM05D007260 ORTHO05D009149 2.6e-25 119.4 130 47.7
Oeu023130.1 Olea europaea HOM05D007260 ORTHO05D009149 2.6e-25 119.4 130 46.2
arahy.Tifrunner.gnm1.ann1.QMP5TS Arachis hypogaea HOM05D007260 ORTHO05D009149 4.4e-25 118.6 130 48.5
ECA248G0818 Erigeron canadensis HOM05D007260 ORTHO05D009149 4.4e-25 118.6 130 45.4
arahy.Tifrunner.gnm1.ann1.HX298U Arachis hypogaea HOM05D007260 ORTHO05D009149 5.7e-25 118.2 130 48.5
VMungo1309G2091 Vigna mungo HOM05D007260 ORTHO05D009149 5.7e-25 118.2 136 46.3
MD14G1076800 Malus domestica HOM05D007260 ORTHO05D009149 7.5e-25 117.9 134 48.5
Migut.J01731 Erythranthe guttata HOM05D007260 ORTHO05D009149 9.7e-25 117.5 131 47.3
QL07p003043 Quercus lobata HOM05D007260 ORTHO05D009149 1.7e-24 116.7 130 46.9
Lj1C1126T6 Lonicera japonica HOM05D007260 ORTHO05D009149 2.2e-24 116.3 130 48.5
TPR.G18237 Trifolium pratense HOM05D007260 ORTHO05D009149 3.7e-24 115.5 153 44.4
Glyma.03G134300 Glycine max HOM05D007260 ORTHO05D009149 4.8e-24 115.2 131 46.6
MBI13_g36811_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 4.8e-24 115.2 131 46.6
Psat3g074400 Pisum sativum HOM05D007260 ORTHO05D009149 4.8e-24 115.2 130 47.7
GSVIVG01033239001 Vitis vinifera HOM05D007260 ORTHO05D009149 6.3e-24 114.8 130 45.4
SGA_v2.0_scaffold105G30380 Striga asiatica HOM05D007260 ORTHO05D009149 1.1e-23 114.0 130 46.9
Eucgr.K02009 Eucalyptus grandis HOM05D007260 ORTHO05D009149 1.4e-23 113.6 130 46.9
Nitab4.5_0000826g0300 Nicotiana tabacum HOM05D007260 ORTHO05D009149 1.4e-23 113.6 149 45.6
MSTRG.19844 Avicennia marina HOM05D007260 ORTHO05D009149 1.8e-23 113.2 148 41.2
CiPaw.10G035100 Carya illinoinensis HOM05D007260 ORTHO05D009149 1.8e-23 113.2 130 45.4
Cc06_g17880 Coffea canephora HOM05D007260 ORTHO05D009149 1.8e-23 113.2 134 44.8
DCAR_020507 Daucus carota HOM05D007260 ORTHO05D009149 1.8e-23 113.2 104 50.0
Hma1.2p1_0110F.1_g052790 Hydrangea macrophylla HOM05D007260 ORTHO05D009149 1.8e-23 113.2 108 50.9
Lsat_1_v5_gn_5_160501 Lactuca sativa HOM05D007260 ORTHO05D009149 1.8e-23 113.2 130 43.1
Lj1P1128T41 Lonicera japonica HOM05D007260 ORTHO05D009149 3.1e-23 112.5 109 50.5
Thecc.05G151300 Theobroma cacao HOM05D007260 ORTHO05D009149 3.1e-23 112.5 130 46.2
Eucgr.K01719 Eucalyptus grandis HOM05D007260 ORTHO05D009149 4.1e-23 112.1 130 45.4
RcHm_v2.0_Chr3g0483391 Rosa chinensis HOM05D007260 ORTHO05D009149 7.0e-23 111.3 133 46.6
Gorai.003G087400 Gossypium raimondii HOM05D007260 ORTHO05D009149 9.1e-23 110.9 151 40.4
Peaxi162Scf00130g00720 Petunia axillaris HOM05D007260 ORTHO05D009149 1.2e-22 110.5 131 46.6
Potri.006G046350 Populus trichocarpa HOM05D007260 ORTHO05D009149 1.2e-22 110.5 136 45.6
Nitab4.5_0006870g0020 Nicotiana tabacum HOM05D007260 ORTHO05D009149 1.6e-22 110.2 148 45.3
Cpa.g.sc182.9 Carica papaya HOM05D007260 ORTHO05D009149 2.7e-22 109.4 149 42.3
Glyma.19G136500 Glycine max HOM05D007260 ORTHO05D009149 2.7e-22 109.4 132 43.9
Lj1g0013385 Lotus japonicus HOM05D007260 ORTHO05D009149 4.5e-22 108.6 130 46.2
Lalb_Chr01g0017381 Lupinus albus HOM05D007260 ORTHO05D009149 4.5e-22 108.6 136 42.6
Ciclev10005732m.g Citrus clementina HOM05D007260 ORTHO05D009149 5.9e-22 108.2 130 46.2
FAN02G1162 Fragaria x ananassa HOM05D007260 ORTHO05D009149 1.0e-21 107.5 154 41.6
AUR62026087 Chenopodium quinoa HOM05D007260 ORTHO05D009149 1.3e-21 107.1 130 46.2
AUR62024501 Chenopodium quinoa HOM05D007260 ORTHO05D009149 1.7e-21 106.7 130 46.2
Haze_19810 Corylus avellana HOM05D007260 ORTHO05D009149 2.2e-21 106.3 131 43.5
Haze_19813 Corylus avellana HOM05D007260 ORTHO05D009149 2.2e-21 106.3 131 43.5
Gohir.D03G072400 Gossypium hirsutum HOM05D007260 ORTHO05D009149 2.2e-21 106.3 151 39.7
Duzib106G0310 Durio zibethinus HOM05D007260 ORTHO05D009149 2.9e-21 105.9 130 43.8
Gohir.A02G107109 Gossypium hirsutum HOM05D007260 ORTHO05D009149 3.8e-21 105.5 151 39.1
Cfa016789 Carpinus fangiana HOM05D007260 ORTHO05D009149 5.0e-21 105.1 130 42.3
EL10Ac3g07131 Beta vulgaris HOM05D007260 ORTHO05D009149 6.5e-21 104.8 151 41.1
PGSC0003DMG401012695 Solanum tuberosum HOM05D007260 ORTHO05D009149 6.5e-21 104.8 147 42.9
Sed0015422 Sechium edule HOM05D007260 ORTHO05D009149 8.5e-21 104.4 131 42.0
FvH4_6g24410 Fragaria vesca HOM05D007260 ORTHO05D009149 1.1e-20 104.0 154 40.9
PSO782G2785 Papaver somniferum HOM05D007260 ORTHO05D009149 1.5e-20 103.6 158 38.6
CsaV3_6G012930 Cucumis sativus L. HOM05D007260 ORTHO05D009149 1.9e-20 103.2 152 40.8
Prupe.7G054700 Prunus persica HOM05D007260 ORTHO05D009149 1.9e-20 103.2 142 45.1
Ah.13g076600 Amaranthus hybridus HOM05D007260 ORTHO05D009149 3.2e-20 102.4 148 39.2
Rhsim03G0028400 Rhododendron simsii HOM05D007260 ORTHO05D009149 3.2e-20 102.4 163 39.3
Sabra06G0031900 Salix brachista HOM05D007260 ORTHO05D009149 3.2e-20 102.4 131 45.0
Carub.0004s2386 Capsella rubella HOM05D007260 ORTHO05D009149 4.2e-20 102.1 132 41.7
Manes.09G018400 Manihot esculenta HOM05D007260 ORTHO05D009149 4.2e-20 102.1 130 43.8
HanXRQChr13g0396001 Helianthus annuus HOM05D007260 ORTHO05D009149 5.5e-20 101.7 107 47.7
AL4G39670 Arabidopsis lyrata HOM05D007260 ORTHO05D009149 9.4e-20 100.9 133 40.6
Atru.chr1.1150 Acer truncatum HOM05D007260 ORTHO05D009149 1.2e-19 100.5 148 41.9
AT2G41600 Arabidopsis thaliana HOM05D007260 ORTHO05D009149 1.2e-19 100.5 132 42.4
Thhalv10017244m.g Eutrema salsugineum HOM05D007260 ORTHO05D009149 1.2e-19 100.5 137 40.1
COL.COLO4_22299 Corchorus olitorius HOM05D007260 ORTHO05D009149 1.6e-19 100.1 164 39.6
Aqoxy1G00296 Aquilegia oxysepala HOM05D007260 ORTHO05D009149 3.6e-19 99.0 133 42.1
CAN.G676.12 Capsicum annuum HOM05D007260 ORTHO05D009149 4.7e-19 98.6 148 41.2
Solyc04g016250.3 Solanum lycopersicum HOM05D007260 ORTHO05D009149 1.4e-18 97.1 152 39.5
Sopen04g008360 Solanum pennellii HOM05D007260 ORTHO05D009149 1.4e-18 97.1 152 40.1
THA.LOC104802057 Tarenaya hassleriana HOM05D007260 ORTHO05D009149 1.4e-18 97.1 131 41.2
Hund19138 Selenicereus undatus HOM05D007260 ORTHO05D009149 2.3e-18 96.3 133 43.6
CARHR136700 Cardamine hirsuta HOM05D007260 ORTHO05D009149 3.0e-18 95.9 118 45.8
ClCG04G003650 Citrullus lanatus HOM05D007260 ORTHO05D009149 3.0e-18 95.9 132 40.9
MBI13_g37004_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 5.2e-18 95.1 102 46.1
Sp4g23850 Schrenkiella parvula HOM05D007260 ORTHO05D009149 5.2e-18 95.1 133 39.8
SEGI_00639 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.2e-17 94.0 132 40.2
SEGI_24189 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.2e-17 94.0 132 40.2
SEGI_29096 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.2e-17 94.0 132 40.2
Sc25g0005370 Simmondsia chinensis HOM05D007260 ORTHO05D009149 1.2e-17 94.0 158 39.2
BcaB06g29191 Brassica carinata HOM05D007260 ORTHO05D009149 9.8e-17 90.9 124 41.9
A04p31710 Brassica napus HOM05D007260 ORTHO05D009149 2.2e-16 89.7 123 42.3
BcaC02g07303 Brassica carinata HOM05D007260 ORTHO05D009149 2.8e-16 89.4 124 41.9
BolC4t28410H Brassica oleracea HOM05D007260 ORTHO05D009149 2.8e-16 89.4 124 41.9
BraA04t18628Z Brassica rapa HOM05D007260 ORTHO05D009149 2.8e-16 89.4 123 42.3
C04p69130 Brassica napus HOM05D007260 ORTHO05D009149 8.3e-16 87.8 124 41.9
Aa31LG1G23620 Aethionema arabicum HOM05D007260 ORTHO05D009149 1.1e-15 87.4 122 40.2
CDE04G0457 Ceratophyllum demersum HOM05D007260 ORTHO05D009149 1.3e-13 80.5 133 36.1
Os11g0140100 Oryza sativa ssp. japonica HOM05D007260 ORTHO05D009149 2.9e-13 79.3 158 37.3
Zm00001eb405200 Zea mays HOM05D007260 ORTHO05D009149 1.9e-12 76.6 136 40.4
CSS0011677 Camellia sinensis var. sinensis HOM05D007260 ORTHO05D009149 5.5e-12 75.1 54 57.4
PSO063G4612 Papaver somniferum HOM05D007260 ORTHO05D009149 5.5e-12 75.1 221 28.5
Zm00001eb306190 Zea mays HOM05D007260 ORTHO05D009149 4.7e-11 72.0 120 41.7
Os12g0136600 Oryza sativa ssp. japonica HOM05D007260 ORTHO05D009149 1.0e-10 70.9 106 39.6
Dinv02794 Davidia involucrata HOM05D007260 ORTHO05D009149 1.2e-09 67.4 81 46.9
MELO3C013619.2 Cucumis melo HOM05D007260 ORTHO05D009149 1.3e-08 63.9 82 41.5


User provided reference genes

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