Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 3.0e-227 791.6 418 100.0
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 6.0e-42 176.0 381 38.6
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 3.0e-41 173.7 391 36.6
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 1.1e-40 171.8 292 41.1
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 1.5e-40 171.4 323 37.8
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 1.5e-40 171.4 318 39.6
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 1.9e-40 171.0 263 44.5
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.1e-39 167.5 238 44.1
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.8e-39 167.2 220 47.3
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 3.6e-39 166.8 259 40.9
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 1.8e-38 164.5 352 34.9
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 1.8e-38 164.5 324 37.7
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 3.1e-38 163.7 256 41.4
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 5.2e-38 162.9 276 40.9
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.2e-37 161.8 256 41.0
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.4e-37 159.8 356 35.4
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 5.8e-37 159.5 232 43.1
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 6.4e-36 156.0 251 43.4
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.1e-35 155.2 267 40.1
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 1.4e-35 154.8 407 35.1
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 2.4e-35 154.1 404 33.7
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 3.2e-35 153.7 416 35.6
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 3.2e-35 153.7 411 35.0
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 3.2e-35 153.7 222 43.2
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 4.1e-35 153.3 224 42.9
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 5.4e-35 152.9 281 41.3
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 9.2e-35 152.1 354 37.3
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 2.1e-34 151.0 223 43.9
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 2.7e-34 150.6 239 42.7
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 3.5e-34 150.2 354 37.0
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 3.5e-34 150.2 301 37.5
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.0e-34 149.4 354 37.0
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 7.8e-34 149.1 354 37.0
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.0e-33 148.7 259 40.2
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.3e-33 148.3 224 42.0
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 2.3e-33 147.5 231 42.4
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 5.0e-33 146.4 361 36.0
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 8.6e-33 145.6 283 38.9
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 8.6e-33 145.6 224 41.1
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.1e-32 145.2 340 35.3
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.5e-32 144.8 354 36.4
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 3.3e-32 143.7 231 44.2
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 4.3e-32 143.3 341 32.6
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 4.3e-32 143.3 233 45.1
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 9.5e-32 142.1 230 40.4
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 1.2e-31 141.7 284 38.7
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 2.1e-31 141.0 313 36.1
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 4.7e-31 139.8 263 39.9
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 4.7e-31 139.8 344 35.2
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.4e-30 138.3 299 39.1
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.4e-30 138.3 223 37.7
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.4e-30 138.3 247 38.5
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 4.0e-30 136.7 286 38.1
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 6.8e-30 136.0 408 34.6
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 6.8e-30 136.0 238 35.7
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 1.2e-29 135.2 317 34.4
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.5e-29 134.8 347 35.2
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 3.4e-29 133.7 277 38.3
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 2.2e-28 131.0 385 33.5
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 3.7e-28 130.2 319 36.1
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.4e-27 127.5 264 33.7
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.6e-26 124.8 264 33.3
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 1.0e-25 122.1 285 32.3
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 1.3e-25 121.7 177 42.9
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.7e-25 121.3 296 36.8
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.3e-25 120.9 287 35.5
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 3.0e-25 120.6 228 37.3
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 3.9e-25 120.2 289 37.0
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 5.1e-25 119.8 198 41.4
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 8.6e-25 119.0 333 33.3
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 1.1e-24 118.6 284 37.0
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 1.5e-24 118.2 309 34.6
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 7.3e-24 115.9 272 37.9
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 7.3e-24 115.9 367 30.8
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 3.6e-23 113.6 233 38.6
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 3.6e-23 113.6 233 38.6
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 4.0e-22 110.2 233 37.8
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 1.2e-21 108.6 198 35.9
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 1.2e-21 108.6 242 36.0
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 2.0e-21 107.8 204 40.2
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 7.6e-21 105.9 287 33.8
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 3.8e-20 103.6 298 33.6
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 4.9e-20 103.2 286 31.5
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.4e-19 101.7 178 41.6
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 4.6e-18 96.7 287 32.1
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 6.0e-18 96.3 315 30.8
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.3e-17 95.1 344 31.7
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 3.0e-17 94.0 256 34.4
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 3.9e-17 93.6 273 31.1
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.9e-17 93.6 217 35.0
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 6.6e-17 92.8 294 32.7
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 6.6e-17 92.8 371 30.7
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.9e-16 91.3 159 41.5
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 5.6e-16 89.7 222 33.3
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 7.3e-16 89.4 221 32.1
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 1.2e-15 88.6 220 32.7
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 1.6e-15 88.2 283 30.0
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.6e-15 88.2 266 30.5
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 6.2e-15 86.3 281 31.3
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 8.1e-15 85.9 224 31.7
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 1.4e-14 85.1 251 31.9
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.4e-14 84.3 224 31.7
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 2.4e-14 84.3 261 30.7
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 3.1e-14 84.0 255 30.6
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 6.9e-14 82.8 294 29.6
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 9.0e-14 82.4 218 31.2
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.2e-13 82.0 203 35.5
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 1.2e-13 82.0 185 33.0
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 1.5e-13 81.6 206 34.5
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 2.0e-13 81.3 285 33.0
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 2.6e-13 80.9 253 31.6
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 2.6e-13 80.9 271 32.5
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 5.8e-13 79.7 223 29.6
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.9e-13 79.0 255 31.8
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.9e-13 79.0 255 31.8
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.9e-13 79.0 255 31.8
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 1.7e-12 78.2 214 31.8
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.7e-12 78.2 219 31.5
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 2.9e-12 77.4 210 31.9
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 3.8e-12 77.0 289 28.7
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 4.9e-12 76.6 212 34.4
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 6.4e-12 76.3 256 32.4
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 8.4e-12 75.9 278 31.3
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 8.4e-12 75.9 225 33.3
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.4e-11 75.1 249 29.3
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.4e-11 75.1 273 29.3
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 1.9e-11 74.7 256 32.0
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.9e-11 74.7 304 27.6
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 4.2e-11 73.6 209 28.2
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 4.2e-11 73.6 271 29.9
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 5.4e-11 73.2 247 29.6
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 1.6e-10 71.6 249 28.9
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 2.1e-10 71.2 246 29.3
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.7e-10 70.9 280 28.2
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 3.5e-10 70.5 228 30.3
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 3.5e-10 70.5 286 30.4
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 3.5e-10 70.5 280 27.9
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 3.5e-10 70.5 300 24.3
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 6.0e-10 69.7 306 29.1
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 7.8e-10 69.3 272 29.0
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 1.0e-09 68.9 208 28.8
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 2.3e-09 67.8 231 29.9
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 3.9e-09 67.0 203 34.0
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 8.7e-09 65.9 156 30.1
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 8.7e-09 65.9 176 31.2
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 1.9e-08 64.7 292 26.0
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 3.3e-08 63.9 278 28.1
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 5.6e-08 63.2 385 25.7
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 7.3e-08 62.8 256 26.6
Mapoly0014s0172 Marchantia polymorpha HOM05D029953 ORTHO05D009567 7.3e-08 62.8 357 24.9
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 9.6e-08 62.4 256 27.7
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 2.8e-07 60.8 227 29.5
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 6.2e-07 59.7 211 26.5
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 1.8e-06 58.2 218 29.4
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 2.4e-06 57.8 196 26.0
Solyc08g082230.3 Solanum lycopersicum HOM05D007666 ORTHO05D009567 9.0e-06 55.8 45 55.6


User provided reference genes

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