Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.2e-89 333.2 169 100.0
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 9.1e-66 253.8 153 83.0
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.6e-65 252.3 152 82.2
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.5e-65 251.9 153 82.4
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.0e-64 250.4 152 82.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.3e-64 250.0 152 81.6
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.7e-64 249.6 152 81.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.2e-64 249.2 153 79.7
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.9e-64 248.8 152 81.6
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.8e-64 248.4 153 81.7
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.8e-64 248.4 150 80.7
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.5e-64 247.7 152 78.9
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.5e-64 247.7 152 78.9
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 8.5e-64 247.3 152 79.6
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 8.5e-64 247.3 161 78.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-63 246.9 152 80.9
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.4e-63 246.5 154 80.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 2.5e-63 245.7 148 83.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 2.5e-63 245.7 148 83.1
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 3.2e-63 245.4 149 79.9
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 3.2e-63 245.4 150 80.0
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.2e-63 245.0 152 80.9
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 7.2e-63 244.2 145 81.4
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 9.4e-63 243.8 145 82.1
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 9.4e-63 243.8 148 81.1
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 9.4e-63 243.8 153 80.4
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.2e-62 243.4 152 79.6
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.2e-62 243.4 138 86.2
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.2e-62 243.4 138 87.0
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.2e-62 243.4 155 78.7
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.2e-62 243.4 150 80.0
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.1e-62 242.7 152 80.3
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.7e-62 242.3 152 79.6
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 6.1e-62 241.1 150 79.3
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 8.0e-62 240.7 149 77.9
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.0e-61 240.4 154 80.5
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.0e-61 240.4 149 81.9
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.4e-61 240.0 152 78.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.8e-61 239.6 148 80.4
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 3.0e-61 238.8 152 75.0
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 3.0e-61 238.8 152 77.0
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.2e-61 238.0 136 85.3
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 6.7e-61 237.7 148 79.1
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 6.7e-61 237.7 152 75.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 8.8e-61 237.3 152 73.7
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 8.8e-61 237.3 152 75.7
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.5e-60 236.5 153 78.4
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.5e-60 236.5 152 77.6
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 2.6e-60 235.7 152 78.9
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 3.3e-60 235.3 152 77.6
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 4.4e-60 235.0 153 76.5
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 4.4e-60 235.0 148 77.0
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 4.4e-60 235.0 152 74.3
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 4.4e-60 235.0 152 76.3
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 9.7e-60 233.8 156 76.3
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.3e-59 233.4 148 80.4
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.7e-59 233.0 152 73.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.7e-59 233.0 148 79.1
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 2.2e-59 232.6 152 73.7
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.2e-59 232.6 156 75.6
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 4.8e-59 231.5 148 75.7
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.1e-58 230.3 138 78.3
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.4e-58 229.9 150 74.0
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.8e-58 229.6 148 76.4
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.8e-58 229.6 153 71.2
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.4e-58 229.2 145 76.6
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 9.1e-58 227.3 165 67.3
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.0e-57 226.1 151 72.2
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.0e-57 226.1 152 73.0
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 4.5e-57 224.9 150 71.3
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 4.5e-57 224.9 128 85.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 5.9e-57 224.6 162 72.8
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 7.7e-57 224.2 130 86.2
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.0e-56 223.8 148 73.0
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.3e-56 223.4 150 72.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.7e-56 223.0 137 78.1
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 6.5e-56 221.1 164 67.1
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-55 220.3 145 77.9
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.1e-55 220.3 145 71.7
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 7.2e-55 217.6 154 68.8
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.2e-55 217.6 141 79.4
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.2e-54 216.9 137 76.6
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 2.1e-54 216.1 164 64.0
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.8e-53 213.0 126 81.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 2.3e-53 212.6 136 75.7
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 4.0e-53 211.8 155 72.9
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.7e-51 206.5 169 63.3
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.2e-51 206.1 149 69.1
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.2e-51 206.1 152 69.1
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.8e-51 205.7 136 72.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.8e-51 205.7 136 72.1
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.4e-50 202.6 136 72.8
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.4e-50 202.6 136 72.1
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 4.1e-50 201.8 137 72.3
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 1.2e-49 200.3 162 64.2
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.2e-49 200.3 149 65.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 2.9e-48 195.7 165 62.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 3.8e-48 195.3 148 64.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.9e-47 193.0 153 69.3
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 8.0e-46 187.6 109 84.4
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.0e-44 183.0 108 82.4
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.1e-42 177.2 110 80.9
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.4e-37 160.2 107 73.8
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 8.0e-30 134.4 95 69.5
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.8e-29 133.3 86 77.9
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.1e-29 132.5 72 87.5
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.2e-28 130.6 87 75.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 4.4e-28 128.6 98 66.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.7e-27 126.7 84 73.8
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.9e-27 125.2 89 71.9
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.2e-25 120.6 145 44.1
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.1e-22 109.8 68 76.5
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.1e-22 109.8 68 76.5
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.9e-16 89.0 58 69.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 5.2e-13 78.6 52 75.0
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 4.3e-07 58.9 42 64.3
Zm00001eb331770 Zea mays HOM05D006610 ORTHO05D008447 1.2e-06 57.4 44 63.6


User provided reference genes

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