Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.6e-129 466.1 229 100.0
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 2.9e-99 365.5 226 83.6
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 2.5e-42 176.4 157 59.9
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 3.7e-38 162.5 168 50.0
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 1.1e-37 161.0 212 47.2
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 1.9e-37 160.2 226 43.8
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 4.1e-37 159.1 144 56.9
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 3.5e-36 156.0 163 50.3
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 4.6e-36 155.6 221 41.6
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 3.0e-35 152.9 225 40.0
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 3.9e-35 152.5 221 40.7
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 6.6e-35 151.8 223 40.8
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 6.6e-35 151.8 144 52.8
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 8.6e-35 151.4 131 55.7
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.1e-34 151.0 164 52.4
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 1.1e-34 151.0 156 48.7
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 1.5e-34 150.6 156 50.0
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.9e-34 150.2 165 48.5
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.9e-34 150.2 136 55.1
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 2.5e-34 149.8 222 40.1
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 2.5e-34 149.8 139 56.8
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 4.3e-34 149.1 136 53.7
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 7.3e-34 148.3 223 41.7
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 7.3e-34 148.3 130 53.8
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 7.3e-34 148.3 130 53.8
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 7.3e-34 148.3 130 53.8
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 1.2e-33 147.5 144 53.5
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 1.2e-33 147.5 221 43.0
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 1.6e-33 147.1 221 40.3
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 2.8e-33 146.4 223 41.7
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.6e-33 146.0 129 55.0
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 4.7e-33 145.6 183 44.8
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 4.7e-33 145.6 156 46.8
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 6.2e-33 145.2 129 54.3
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 6.2e-33 145.2 129 55.0
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 6.2e-33 145.2 129 55.0
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 6.2e-33 145.2 223 41.3
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 8.0e-33 144.8 159 49.1
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 8.0e-33 144.8 130 54.6
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 8.0e-33 144.8 129 55.0
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 1.1e-32 144.4 129 53.5
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 3.1e-32 142.9 127 52.8
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 3.1e-32 142.9 213 42.7
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.0e-32 142.5 131 55.0
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 8.9e-32 141.4 175 44.0
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 8.9e-32 141.4 134 49.3
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 1.2e-31 141.0 146 47.3
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 4.4e-31 139.0 158 46.8
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.5e-31 138.3 116 57.8
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.5e-31 138.3 116 57.8
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 9.8e-31 137.9 139 50.4
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 9.8e-31 137.9 165 43.0
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.3e-30 137.5 130 53.8
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 2.2e-30 136.7 142 48.6
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 2.9e-30 136.3 129 52.7
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 2.9e-30 136.3 129 51.2
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 4.9e-30 135.6 189 42.9
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 6.4e-30 135.2 179 43.0
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 6.4e-30 135.2 167 43.7
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 1.1e-29 134.4 144 47.9
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 1.1e-29 134.4 223 38.6
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 1.1e-29 134.4 129 50.4
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.4e-29 134.0 131 53.4
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 1.4e-29 134.0 130 49.2
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 1.4e-29 134.0 129 52.7
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 1.4e-29 134.0 129 50.4
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 3.2e-29 132.9 129 50.4
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 4.1e-29 132.5 129 48.1
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 9.2e-29 131.3 129 46.5
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 1.2e-28 131.0 124 50.0
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 1.6e-28 130.6 220 38.2
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 2.1e-28 130.2 127 52.0
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 2.7e-28 129.8 129 48.8
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 2.7e-28 129.8 129 48.1
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 2.7e-28 129.8 129 48.1
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 2.7e-28 129.8 129 48.8
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 2.7e-28 129.8 157 41.4
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 3.5e-28 129.4 137 51.1
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 4.6e-28 129.0 127 49.6
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 4.6e-28 129.0 128 50.8
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 6.0e-28 128.6 147 42.2
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 6.0e-28 128.6 129 49.6
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 1.0e-27 127.9 129 47.3
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 1.7e-27 127.1 126 50.0
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 8.6e-27 124.8 119 52.9
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 1.1e-26 124.4 227 36.1
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 1.5e-26 124.0 123 51.2
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 1.9e-26 123.6 223 39.0
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 1.9e-26 123.6 128 48.4
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 2.5e-26 123.2 120 51.7
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.5e-26 123.2 131 51.1
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 4.3e-26 122.5 129 46.5
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 4.3e-26 122.5 129 47.3
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 9.5e-26 121.3 228 38.2
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 9.5e-26 121.3 221 36.2
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 1.2e-25 120.9 120 50.0
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 1.2e-25 120.9 212 36.8
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 2.1e-25 120.2 172 41.3
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 2.8e-25 119.8 198 36.9
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 2.8e-25 119.8 129 48.1
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 6.2e-25 118.6 228 37.3
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 2.3e-24 116.7 127 45.7
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 2.6e-23 113.2 229 33.2
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 1.3e-22 110.9 88 63.6
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.7e-22 110.5 112 50.0
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 2.2e-22 110.2 129 43.4
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 3.7e-22 109.4 227 33.0
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.9e-21 107.1 131 45.8
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.2e-21 106.3 131 45.0
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.5e-20 102.8 104 51.9
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.0e-20 102.1 91 54.9
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 3.9e-19 99.4 88 59.1
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 5.1e-19 99.0 131 42.0
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 6.6e-19 98.6 88 53.4
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.5e-18 97.4 88 53.4
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 1.2e-17 94.4 75 62.7
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 3.1e-16 89.7 95 47.4
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 3.1e-16 89.7 126 42.1
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 1.2e-15 87.8 75 57.3
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 8.7e-11 71.6 167 31.1
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 1.6e-09 67.4 53 60.4


User provided reference genes

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