Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 4.8e-177 624.4 315 100.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 6.2e-52 208.8 288 44.1
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 5.7e-45 185.7 299 41.8
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 5.7e-45 185.7 287 42.5
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 8.5e-41 171.8 293 40.3
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 3.6e-39 166.4 306 40.5
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 7.9e-39 165.2 293 37.5
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.8e-38 164.1 298 37.6
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 1.8e-38 164.1 279 41.6
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 3.9e-38 162.9 295 40.3
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 6.7e-38 162.2 282 41.1
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.5e-37 161.0 300 37.3
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 1.9e-37 160.6 280 38.9
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 1.3e-36 157.9 276 39.1
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 4.8e-36 156.0 277 37.9
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.1e-35 154.8 294 38.1
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.8e-35 154.1 288 39.2
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.8e-35 154.1 282 42.6
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 5.3e-35 152.5 309 36.9
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.0e-33 148.3 276 38.0
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.3e-33 147.9 287 36.6
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.7e-33 147.5 288 37.5
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.2e-33 147.1 271 37.3
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 3.8e-33 146.4 287 35.9
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 3.8e-33 146.4 282 38.3
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 8.5e-33 145.2 289 36.3
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 8.5e-33 145.2 281 35.6
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.5e-32 143.7 284 35.6
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 3.2e-32 143.3 293 37.2
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 4.2e-32 142.9 291 35.7
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.2e-32 142.9 271 35.8
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 7.2e-32 142.1 280 38.6
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 7.2e-32 142.1 293 36.2
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 7.2e-32 142.1 279 36.6
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 2.1e-31 140.6 290 35.9
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.7e-31 140.2 275 35.6
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 4.7e-31 139.4 287 36.2
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 4.7e-31 139.4 271 35.4
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 7.9e-31 138.7 150 50.0
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.0e-30 138.3 308 33.8
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.0e-30 138.3 288 35.4
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 1.0e-30 138.3 290 35.9
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-30 137.9 294 35.4
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.4e-30 137.9 271 35.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.8e-30 137.5 297 35.7
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.8e-30 137.5 293 36.5
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 1.8e-30 137.5 287 34.8
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.3e-30 137.1 287 35.5
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 3.9e-30 136.3 270 36.3
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.1e-30 136.0 291 34.4
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 5.1e-30 136.0 291 37.5
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 6.7e-30 135.6 287 33.4
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 6.7e-30 135.6 150 49.3
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.1e-29 134.8 297 35.4
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.1e-29 134.8 270 36.3
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.1e-29 134.8 270 36.3
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 1.5e-29 134.4 288 35.1
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.6e-29 133.7 147 49.7
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 4.4e-29 132.9 319 34.5
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 7.4e-29 132.1 288 34.7
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 7.4e-29 132.1 290 35.9
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 7.4e-29 132.1 284 37.3
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 7.4e-29 132.1 281 35.9
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 1.7e-28 131.0 331 34.1
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 2.2e-28 130.6 296 36.1
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 6.3e-28 129.0 304 36.2
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 6.3e-28 129.0 304 36.2
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 8.2e-28 128.6 294 35.0
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 1.1e-27 128.3 144 51.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.4e-27 127.9 279 37.3
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 2.4e-27 127.1 273 35.9
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 3.1e-27 126.7 287 34.8
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 3.1e-27 126.7 150 48.0
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 4.1e-27 126.3 142 49.3
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.3e-27 125.9 296 34.1
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 7.0e-27 125.6 150 48.0
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 7.0e-27 125.6 291 35.4
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 1.2e-26 124.8 141 46.1
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 1.2e-26 124.8 127 55.1
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 1.5e-26 124.4 143 47.6
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 2.0e-26 124.0 290 34.1
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.0e-26 124.0 279 35.8
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 2.6e-26 123.6 279 35.8
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.3e-25 121.3 289 33.2
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 2.9e-25 120.2 270 35.6
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 5.0e-25 119.4 282 34.0
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.4e-24 117.9 292 34.6
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.9e-24 117.5 295 32.9
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 2.5e-24 117.1 148 42.6
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 9.4e-24 115.2 274 31.4
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 4.7e-23 112.8 166 44.0
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 6.1e-23 112.5 341 30.5
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 8.0e-23 112.1 163 43.6
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 8.0e-23 112.1 145 44.8
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.0e-22 111.7 166 43.4
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.4e-22 111.3 142 47.2
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 5.2e-22 109.4 288 33.7
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 4.4e-21 106.3 148 46.6
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 4.4e-21 106.3 157 42.7
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 4.4e-21 106.3 166 41.0
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 5.7e-21 105.9 157 43.3
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 5.7e-21 105.9 186 40.3
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 9.7e-21 105.1 154 45.5
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 2.0e-18 97.4 240 32.9
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 1.0e-17 95.1 180 40.0
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 2.2e-17 94.0 130 46.2
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 6.1e-15 85.9 139 39.6
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.0e-14 85.1 156 37.8
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.6e-10 71.2 59 55.9
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 3.5e-10 70.1 205 30.2
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 8.5e-09 65.5 206 29.6
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 8.8e-06 55.5 136 30.9


User provided reference genes

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