Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 5.9e-57 223.8 99 100.0
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 4.0e-45 184.5 99 78.8
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 4.0e-45 184.5 100 82.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 8.8e-45 183.3 97 80.4
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.5e-44 182.6 99 77.8
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.5e-44 182.6 99 80.8
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 2.0e-44 182.2 99 76.8
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 2.0e-44 182.2 99 76.8
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 4.4e-44 181.0 99 77.8
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 4.4e-44 181.0 100 80.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 5.7e-44 180.6 100 80.0
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 5.7e-44 180.6 100 79.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 5.7e-44 180.6 100 79.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 5.7e-44 180.6 100 79.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 5.7e-44 180.6 100 80.0
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 2.2e-43 178.7 100 78.0
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.8e-43 178.3 100 79.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 78.0
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 6.3e-43 177.2 99 75.8
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 6.3e-43 177.2 100 77.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 8.3e-43 176.8 100 77.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 8.3e-43 176.8 100 78.0
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 8.3e-43 176.8 99 78.8
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.1e-42 176.4 99 74.7
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.4e-42 176.0 98 79.6
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.4e-42 176.0 100 76.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.4e-42 176.0 100 76.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.4e-42 176.0 100 76.0
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 1.4e-42 176.0 99 74.7
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 1.4e-42 176.0 99 74.7
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 76.8
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 76.8
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 73.7
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 2.4e-42 175.3 98 77.6
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 3.1e-42 174.9 99 76.8
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 4.1e-42 174.5 100 77.0
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 4.1e-42 174.5 100 75.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.4e-42 174.1 98 78.6
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 5.4e-42 174.1 99 75.8
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 5.4e-42 174.1 100 76.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 5.4e-42 174.1 99 75.8
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 5.4e-42 174.1 100 76.0
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 7.0e-42 173.7 100 75.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 73.7
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 73.7
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 7.0e-42 173.7 100 77.0
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 9.1e-42 173.3 99 75.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 9.1e-42 173.3 99 75.8
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.2e-41 172.9 100 75.0
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.6e-41 172.6 100 76.0
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 75.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 2.7e-41 171.8 100 75.0
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 74.7
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 74.7
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 74.7
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 74.7
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 74.7
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 74.7
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 75.0
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 3.5e-41 171.4 100 75.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.5e-41 171.4 99 73.7
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.0e-40 169.9 99 71.7
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 1.7e-40 169.1 100 74.0
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 2.3e-40 168.7 100 72.0
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 8.6e-40 166.8 100 74.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 8.6e-40 166.8 100 71.0
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 1.1e-39 166.4 95 75.8
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.5e-39 166.0 98 72.4
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 9.5e-39 163.3 100 69.0
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 2.1e-38 162.2 99 67.7
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 2.1e-38 162.2 100 69.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 6.1e-38 160.6 100 68.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 3.0e-37 158.3 98 68.4
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 4.0e-37 157.9 100 68.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 5.2e-37 157.5 100 67.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 5.2e-37 157.5 100 67.0
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.0e-36 155.6 98 67.3
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.6e-36 155.2 98 69.4
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 4.4e-36 154.5 97 67.0
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 6.3e-35 150.6 99 61.6
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.1e-34 149.8 99 60.6
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.8e-34 149.1 85 78.8
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 2.0e-33 145.6 88 72.7
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 3.5e-33 144.8 87 71.3
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 4.5e-33 144.4 134 52.2
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 2.3e-32 142.1 110 55.5
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 5.0e-32 141.0 169 43.8
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.9e-31 139.0 100 65.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.9e-31 139.0 100 65.0
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 1.6e-30 136.0 98 59.2
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.0e-29 133.3 99 58.6
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.5e-28 129.4 99 56.6
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 4.9e-27 124.4 101 58.4
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.0e-25 119.0 70 72.9
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 4.0e-21 104.8 101 53.5
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 4.4e-20 101.3 102 52.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 1.4e-18 96.3 58 70.7
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.6e-17 92.8 100 45.0
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 8.9e-13 77.0 37 89.2
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.4e-10 69.7 40 75.0
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 7.8e-09 63.9 32 81.2


User provided reference genes

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