Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0177G003 Amborella trichopoda HOM05D000874 ORTHO05D001267 3.7e-259 897.9 519 100.0
Nn4g23458 Nelumbo nucifera HOM05D000874 ORTHO05D001267 2.5e-34 151.0 508 39.4
Hma1.2p1_0060F.1_g032960 Hydrangea macrophylla HOM05D000874 ORTHO05D001267 3.2e-29 134.0 130 53.1
CDE08G1099 Ceratophyllum demersum HOM05D000874 ORTHO05D001267 7.9e-28 129.4 169 44.4
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 1.0e-27 129.0 413 35.8
HPP92_007834 Vanilla planifolia HOM05D000874 ORTHO05D001267 1.0e-27 129.0 131 55.7
Dinv17430 Davidia involucrata HOM05D000874 ORTHO05D001267 5.1e-27 126.7 561 34.9
SEGI_24030 Sequoiadendron giganteum HOM05D000874 ORTHO05D001267 2.6e-26 124.4 130 51.5
TAR629G2997 Trochodendron aralioides HOM05D000874 ORTHO05D001267 4.4e-26 123.6 536 35.6
Actinidia35043 Actinidia chinensis HOM05D000874 ORTHO05D001267 5.7e-26 123.2 545 32.5
HanXRQChr08g0230421 Helianthus annuus HOM05D000874 ORTHO05D001267 3.7e-25 120.6 153 47.1
SEGI_15515 Sequoiadendron giganteum HOM05D000874 ORTHO05D001267 8.2e-25 119.4 168 42.3
Sc12g0007060 Simmondsia chinensis HOM05D000874 ORTHO05D001267 1.4e-24 118.6 465 34.2
EL10Ac5g11157 Beta vulgaris HOM05D000874 ORTHO05D001267 6.9e-24 116.3 199 39.7
SEGI_09522 Sequoiadendron giganteum HOM05D000874 ORTHO05D001267 1.2e-23 115.5 153 41.8
ClCG06G015550 Citrullus lanatus HOM05D000874 ORTHO05D001267 3.4e-23 114.0 351 37.0
AUR62039650 Chenopodium quinoa HOM05D000874 ORTHO05D001267 4.5e-23 113.6 195 38.5
Lj5P134T60 Lonicera japonica HOM05D000874 ORTHO05D001267 5.9e-23 113.2 120 47.5
AUR62021535 Chenopodium quinoa HOM05D000874 ORTHO05D001267 1.0e-22 112.5 120 50.8
Rhsim08G0144400 Rhododendron simsii HOM05D000874 ORTHO05D001267 1.0e-22 112.5 477 34.4
ECA246G3190 Erigeron canadensis HOM05D000874 ORTHO05D001267 2.2e-22 111.3 141 45.4
Eucgr.B00614 Eucalyptus grandis HOM05D000874 ORTHO05D001267 2.9e-22 110.9 136 45.6
Ciclev10018493m.g Citrus clementina HOM05D000874 ORTHO05D001267 5.0e-22 110.2 154 44.8
Sed0005310 Sechium edule HOM05D000874 ORTHO05D001267 6.5e-22 109.8 380 34.5
Aqoxy3G03671 Aquilegia oxysepala HOM05D000874 ORTHO05D001267 2.5e-21 107.8 507 32.1
PSO339G4599 Papaver somniferum HOM05D000874 ORTHO05D001267 5.5e-21 106.7 165 41.2
TWI60G0966 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 2.1e-20 104.8 223 37.7
TWI60G1583 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 2.1e-20 104.8 223 37.7
vmacro16488 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 4.7e-20 103.6 540 31.5
Cpa.g.sc94.72 Carica papaya HOM05D000874 ORTHO05D001267 6.1e-20 103.2 522 27.8
PSO648G0103 Papaver somniferum HOM05D000874 ORTHO05D001267 1.0e-19 102.4 142 47.2
Actinidia04813 Actinidia chinensis HOM05D000874 ORTHO05D001267 5.2e-19 100.1 411 35.3
QL10p019931 Quercus lobata HOM05D000874 ORTHO05D001267 8.8e-19 99.4 201 36.3
MELO3C017235.2 Cucumis melo HOM05D000874 ORTHO05D001267 1.1e-18 99.0 477 33.8
Lsat_1_v5_gn_5_23020 Lactuca sativa HOM05D000874 ORTHO05D001267 3.3e-18 97.4 122 45.9
CsaV3_1G003050 Cucumis sativus L. HOM05D000874 ORTHO05D001267 4.4e-18 97.1 479 34.9
Nn3g17475 Nelumbo nucifera HOM05D000874 ORTHO05D001267 5.7e-18 96.7 257 40.1
Atru.chr9.525 Acer truncatum HOM05D000874 ORTHO05D001267 7.4e-18 96.3 156 37.2
Cc00_g03520 Coffea canephora HOM05D000874 ORTHO05D001267 1.7e-17 95.1 465 31.8
Manes.06G083000 Manihot esculenta HOM05D000874 ORTHO05D001267 3.7e-17 94.0 541 28.8
Pp3c4_15980 Physcomitrium patens HOM05D000874 ORTHO05D001267 3.1e-16 90.9 127 42.5
Gohir.A03G070700 Gossypium hirsutum HOM05D000874 ORTHO05D001267 4.1e-16 90.5 473 30.0
Pp3c12_4860 Physcomitrium patens HOM05D000874 ORTHO05D001267 1.2e-15 89.0 123 42.3
CBR_g37879 Chara braunii HOM05D000874 ORTHO05D001267 1.6e-15 88.6 198 35.9
PGR083G2399 Punica granatum HOM05D000874 ORTHO05D001267 2.6e-15 87.8 434 29.7
CiPaw.11G055400 Carya illinoinensis HOM05D000874 ORTHO05D001267 1.3e-14 85.5 489 31.5
Lj1g0025338 Lotus japonicus HOM05D000874 ORTHO05D001267 6.5e-14 83.2 177 33.9
Glyma.04G160800 Glycine max HOM05D000874 ORTHO05D001267 1.5e-13 82.0 185 34.1
Prupe.5G206700 Prunus persica HOM05D000874 ORTHO05D001267 2.5e-13 81.3 509 28.3
Glyma.06G204600 Glycine max HOM05D000874 ORTHO05D001267 1.6e-12 78.6 185 30.3
Phvul.009G202700 Phaseolus vulgaris HOM05D000874 ORTHO05D001267 3.6e-12 77.4 185 28.1
Gorai.003G101900 Gossypium raimondii HOM05D000874 ORTHO05D001267 6.1e-12 76.6 463 25.9
SMO353G0398 Selaginella moellendorffii HOM05D000874 ORTHO05D001267 6.1e-12 76.6 116 34.5
Thecc.03G104300 Theobroma cacao HOM05D000874 ORTHO05D001267 1.0e-11 75.9 497 27.0
VMungo1309G0947 Vigna mungo HOM05D000874 ORTHO05D001267 1.4e-11 75.5 116 37.1
Manes.14G086800 Manihot esculenta HOM05D000874 ORTHO05D001267 8.8e-11 72.8 523 29.1
arahy.Tifrunner.gnm1.ann1.GR9NQC Arachis hypogaea HOM05D000874 ORTHO05D001267 7.5e-10 69.7 171 31.6
arahy.Tifrunner.gnm1.ann1.A58RJ7 Arachis hypogaea HOM05D000874 ORTHO05D001267 4.8e-09 67.0 171 31.0
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 5.9e-07 60.1 79 38.0
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.0e-06 59.3 66 43.9
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.9e-06 57.8 65 41.5
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.9e-06 57.8 92 38.0
PRCOL_00003511 Prasinoderma coloniale HOM05D005511 ORTHO05D006616 2.9e-06 57.8 51 49.0
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 2.9e-06 57.8 83 38.6
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.8e-06 57.4 67 44.8
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 5.0e-06 57.0 79 36.7
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 5.0e-06 57.0 83 37.3
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 6.5e-06 56.6 67 44.8
Duzib138G0206 Durio zibethinus HOM05D004785 ORTHO05D005704 8.5e-06 56.2 141 28.4


User provided reference genes

Program Settings