Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 5.0e-162 574.3 280 100.0
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 4.1e-95 352.1 252 63.5
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 9.4e-92 340.9 269 58.4
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 6.7e-90 334.7 262 60.3
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.5e-89 333.6 280 56.1
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 2.0e-89 333.2 278 53.6
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 2.5e-89 332.8 274 56.2
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.5e-89 332.8 259 56.0
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 3.3e-89 332.4 255 59.6
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 4.3e-89 332.0 274 54.0
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 4.3e-89 332.0 274 56.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 1.7e-88 330.1 272 54.8
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.2e-88 329.7 274 55.8
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 2.8e-88 329.3 268 56.0
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 3.7e-88 328.9 265 56.6
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 4.8e-88 328.6 253 60.5
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 6.3e-88 328.2 273 55.7
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.1e-87 327.4 261 56.3
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 2.4e-87 326.2 252 58.7
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.4e-87 326.2 251 57.0
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 4.1e-87 325.5 255 58.0
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 2.0e-86 323.2 255 56.1
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 3.4e-86 322.4 275 53.5
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 2.9e-85 319.3 265 53.6
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 5.0e-85 318.5 270 53.7
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 6.5e-85 318.2 269 53.5
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.1e-84 317.4 252 56.0
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 1.9e-84 316.6 271 52.0
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 5.5e-84 315.1 262 56.1
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.2e-83 313.9 266 53.0
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.2e-83 313.9 271 52.0
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 1.2e-83 313.9 255 56.1
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.6e-83 312.4 274 52.9
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 4.7e-83 312.0 252 53.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 6.1e-83 311.6 250 54.4
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 6.1e-83 311.6 270 51.9
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.3e-82 309.7 252 56.3
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 3.9e-82 308.9 291 49.8
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 8.8e-82 307.8 252 54.4
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.5e-81 307.0 251 54.2
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.5e-81 307.0 270 51.9
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 2.0e-81 306.6 291 49.5
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.0e-81 306.6 272 52.2
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 3.3e-81 305.8 271 53.1
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.3e-80 303.9 273 53.1
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 1.7e-80 303.5 278 50.7
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 2.8e-80 302.8 275 50.5
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.8e-80 302.8 261 54.4
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 1.1e-79 300.8 274 51.1
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.4e-79 300.4 274 51.5
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.4e-79 300.4 286 52.4
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.8e-79 300.1 279 50.5
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.4e-79 299.7 252 54.0
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 4.1e-79 298.9 270 50.7
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 5.3e-79 298.5 269 50.2
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 9.1e-79 297.7 272 50.7
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.2e-78 297.4 279 49.1
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.0e-78 296.6 270 51.9
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 7.7e-78 294.7 228 57.5
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.0e-77 294.3 251 52.6
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.2e-77 293.1 276 49.3
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.2e-77 293.1 280 49.3
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.2e-77 293.1 293 49.1
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 8.5e-77 291.2 320 45.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 4.2e-76 288.9 309 46.3
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 4.2e-76 288.9 252 53.6
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 5.5e-76 288.5 251 54.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.2e-75 287.3 258 51.2
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 4.7e-75 285.4 233 54.5
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.0e-74 284.3 263 51.0
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 5.2e-74 282.0 306 44.1
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 6.7e-74 281.6 243 51.9
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.1e-73 280.8 252 51.6
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 2.0e-73 280.0 336 42.6
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 2.0e-73 280.0 263 49.4
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.2e-72 276.6 245 51.4
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 2.8e-72 276.2 244 52.5
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.4e-71 273.9 243 52.3
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 7.0e-71 271.6 232 54.3
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 9.1e-71 271.2 247 51.4
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.5e-70 268.9 269 47.6
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.5e-68 261.9 276 46.4
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.0e-66 257.7 267 47.6
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 4.4e-65 252.3 220 51.4
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 5.7e-65 251.9 200 56.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 7.5e-65 251.5 200 55.5
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.8e-63 246.9 272 44.5
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 7.0e-63 245.0 209 51.7
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.2e-62 244.2 210 51.4
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.6e-62 243.8 330 42.1
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 4.5e-62 242.3 285 44.9
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 7.7e-62 241.5 206 54.9
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 5.0e-61 238.8 202 55.0
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 8.5e-61 238.0 207 53.1
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.1e-60 237.7 202 52.0
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 4.0e-58 229.2 245 46.1
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 6.8e-58 228.4 202 50.0
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.5e-57 227.3 356 38.5
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 4.9e-56 222.2 231 48.1
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.4e-55 220.7 199 54.8
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 2.4e-55 219.9 188 53.7
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 5.4e-55 218.8 193 52.8
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.8e-53 212.6 288 37.8
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.1e-52 211.1 189 56.1
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 8.9e-50 201.4 264 39.0
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 4.1e-47 192.6 173 50.9
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 7.0e-47 191.8 235 40.0
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 1.6e-43 180.6 225 42.2
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.9e-39 167.2 185 45.4
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 3.6e-35 152.9 134 53.7
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 6.2e-35 152.1 200 38.0
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 9.2e-31 138.3 180 41.1
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 4.1e-23 112.8 246 29.3
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 2.1e-22 110.5 172 39.0
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.3e-21 107.8 141 41.8
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 3.0e-21 106.7 104 46.2
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 5.2e-18 95.9 91 51.6
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 2.9e-16 90.1 72 52.8
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.3e-10 69.3 52 59.6
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.2e-06 58.2 73 42.5


User provided reference genes

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