Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.3e-149 531.6 397 100.0
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 9.4e-21 105.5 175 39.4
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 2.1e-20 104.4 182 37.9
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 3.6e-20 103.6 120 45.0
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.4e-19 101.7 174 33.9
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 6.7e-19 99.4 171 38.0
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 6.7e-19 99.4 126 42.1
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 1.1e-18 98.6 182 37.4
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 1.5e-18 98.2 167 37.7
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.5e-18 98.2 138 39.9
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 1.7e-17 94.7 161 37.3
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 2.2e-17 94.4 135 40.0
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 8.2e-17 92.4 144 37.5
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.1e-16 92.0 146 36.3
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.1e-16 92.0 146 36.3
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 2.4e-16 90.9 118 40.7
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 5.3e-16 89.7 184 30.4
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 7.0e-16 89.4 163 35.6
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 9.1e-16 89.0 119 42.0
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 9.1e-16 89.0 138 37.7
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 9.1e-16 89.0 138 37.0
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.2e-15 88.6 119 40.3
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 2.0e-15 87.8 119 39.5
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 2.0e-15 87.8 175 32.6
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 5.9e-15 86.3 133 39.8
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 5.9e-15 86.3 115 41.7
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 7.7e-15 85.9 140 35.0
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 1.0e-14 85.5 162 35.8
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 1.0e-14 85.5 135 35.6
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.7e-14 84.7 151 35.8
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 2.2e-14 84.3 166 32.5
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 3.8e-14 83.6 135 34.1
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 5.0e-14 83.2 170 34.1
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.5e-13 80.9 119 37.8
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 3.2e-13 80.5 137 35.8
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 4.2e-13 80.1 150 34.0
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 7.2e-13 79.3 114 38.6
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 7.2e-13 79.3 145 37.2
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.2e-12 78.6 100 45.0
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 1.6e-12 78.2 144 32.6
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 2.7e-12 77.4 114 39.5
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 6.1e-12 76.3 124 37.1
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 1.8e-11 74.7 196 29.6
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 3.0e-11 73.9 136 30.9
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 3.0e-11 73.9 136 30.9
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 4.0e-11 73.6 123 35.0
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 4.0e-11 73.6 146 36.3
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 4.0e-11 73.6 160 34.4
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 5.2e-11 73.2 131 33.6
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 6.7e-11 72.8 103 40.8
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 8.8e-11 72.4 179 34.1
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 1.5e-10 71.6 132 30.3
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 1.5e-10 71.6 132 30.3
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 2.0e-10 71.2 130 34.6
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 2.0e-10 71.2 136 30.9
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 2.0e-10 71.2 114 37.7
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 3.3e-10 70.5 117 32.5
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 3.3e-10 70.5 161 31.7
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 3.3e-10 70.5 138 31.2
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 3.3e-10 70.5 119 33.6
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 7.5e-10 69.3 153 33.3
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.3e-09 68.6 120 36.7
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 2.8e-09 67.4 143 29.4
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 8.2e-09 65.9 186 29.0
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 1.4e-08 65.1 135 32.6
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 3.1e-08 63.9 123 31.7
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 3.1e-08 63.9 113 35.4
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 3.1e-08 63.9 128 34.4
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 3.1e-08 63.9 174 31.0
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 4.1e-08 63.5 155 29.7
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 4.1e-08 63.5 155 29.7
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 5.3e-08 63.2 138 28.3
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 9.1e-08 62.4 113 35.4
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 9.1e-08 62.4 155 29.7
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.0e-07 61.2 136 29.4
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 2.9e-06 57.4 140 31.4


User provided reference genes

Program Settings