Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 4.1e-99 364.8 189 100.0
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 4.0e-38 162.2 183 49.2
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 1.3e-36 157.1 185 49.2
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 1.1e-35 154.1 185 48.6
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 6.0e-34 148.3 187 42.8
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 1.3e-31 140.6 177 46.9
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 4.8e-31 138.7 184 45.7
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 8.1e-31 137.9 192 43.2
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 7.6e-29 131.3 187 41.7
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 3.8e-28 129.0 177 44.6
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 8.4e-28 127.9 146 43.8
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 1.4e-27 127.1 180 41.1
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 1.4e-27 127.1 179 45.3
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 1.4e-27 127.1 180 42.2
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 2.4e-27 126.3 179 45.8
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 2.4e-27 126.3 182 41.8
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 3.2e-27 125.9 186 40.3
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 3.2e-27 125.9 188 39.4
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 4.2e-27 125.6 182 41.2
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 9.3e-27 124.4 187 38.5
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 9.3e-27 124.4 182 40.7
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 9.3e-27 124.4 181 40.9
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 1.6e-26 123.6 202 36.6
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 4.6e-26 122.1 179 43.6
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 4.6e-26 122.1 238 35.7
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 6.0e-26 121.7 181 39.8
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 6.0e-26 121.7 178 41.6
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 1.0e-25 120.9 178 41.0
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 1.8e-25 120.2 186 40.9
SEGI_02179 Sequoiadendron giganteum HOM05D056589 ORTHO05D008593 3.9e-25 119.0 188 39.9
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 8.7e-25 117.9 190 39.5
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 1.1e-24 117.5 165 41.8
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 1.5e-24 117.1 191 41.9
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 1.5e-24 117.1 171 40.9
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 2.5e-24 116.3 168 43.5
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 3.3e-24 115.9 178 37.6
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 9.6e-24 114.4 178 37.1
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 9.6e-24 114.4 195 40.0
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 9.6e-24 114.4 190 38.9
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 9.6e-24 114.4 178 38.8
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 2.8e-23 112.8 192 33.9
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 2.8e-23 112.8 178 40.4
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 4.8e-23 112.1 190 37.9
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 6.2e-23 111.7 192 33.9
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 8.1e-23 111.3 188 34.6
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 2.4e-22 109.8 190 38.4
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 3.1e-22 109.4 190 38.4
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 3.1e-22 109.4 195 35.9
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 3.1e-22 109.4 143 42.7
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 4.0e-22 109.0 187 40.6
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 4.0e-22 109.0 138 44.2
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 5.3e-22 108.6 182 35.7
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 9.0e-22 107.8 123 50.4
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 1.2e-21 107.5 188 38.3
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 1.5e-21 107.1 134 41.8
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 2.0e-21 106.7 188 33.5
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 3.4e-21 105.9 189 39.2
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 7.6e-21 104.8 147 40.8
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 1.3e-20 104.0 171 38.0
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 1.7e-20 103.6 183 34.4
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 2.2e-20 103.2 179 36.3
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 2.2e-20 103.2 184 37.0
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 3.8e-20 102.4 174 36.8
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 6.4e-20 101.7 142 40.8
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 6.4e-20 101.7 188 37.2
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 1.9e-19 100.1 123 47.2
unitig_94.g28350 Utricularia gibba HOM05D007204 ORTHO05D008593 4.2e-19 99.0 154 37.0
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 9.3e-19 97.8 210 33.8
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 1.2e-18 97.4 182 33.5
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 1.2e-18 97.4 186 34.4
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 3.5e-18 95.9 178 34.8
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 6.0e-18 95.1 136 41.9
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 3.0e-17 92.8 179 33.0
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 3.0e-17 92.8 183 35.0
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 6.7e-17 91.7 145 39.3
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 8.7e-17 91.3 176 33.5
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 1.1e-16 90.9 222 33.3
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 1.1e-16 90.9 149 37.6
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 1.1e-16 90.9 183 34.4
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 1.5e-16 90.5 176 31.8
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 7.4e-16 88.2 176 32.4
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 9.6e-16 87.8 176 32.4
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 1.3e-15 87.4 176 31.2
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 1.3e-15 87.4 178 32.0
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 4.8e-15 85.5 176 30.7
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 6.2e-15 85.1 160 36.2
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 8.2e-15 84.7 176 30.1
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 3.1e-14 82.8 177 30.5
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 1.5e-13 80.5 176 29.5
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 2.6e-13 79.7 109 41.3
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 4.5e-13 79.0 126 35.7
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 4.5e-13 79.0 200 27.5
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 5.8e-13 78.6 123 35.8
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 2.9e-12 76.3 200 27.5
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 4.2e-11 72.4 257 26.8
SMO358G0161 Selaginella moellendorffii HOM05D007204 ORTHO05D008593 1.0e-09 67.8 136 33.8
Zm00001eb025660 Zea mays HOM05D007204 ORTHO05D008593 2.3e-09 66.6 95 36.8
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 8.7e-09 64.7 190 28.4
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 1.5e-08 63.9 121 35.5
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 4.3e-08 62.4 121 34.7
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 9.7e-08 61.2 83 37.3


User provided reference genes

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