Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0174G003 Amborella trichopoda HOM05D000287 ORTHO05D067911 1.4e-75 286.2 139 100.0
ATR1127G040 Amborella trichopoda HOM05D000287 ORTHO05D000319 1.5e-34 149.8 204 43.6
COL.COLO4_19359 Corchorus olitorius HOM05D000287 ORTHO05D002423 1.7e-17 93.2 108 39.8
Atru.chr12.178 Acer truncatum HOM05D000287 ORTHO05D002423 1.2e-15 87.0 218 26.6
MBI03_g40026_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 2.7e-15 85.9 215 29.8
Aqoxy4G02412 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 1.6e-12 76.6 217 27.6
Potri.012G115000 Populus trichocarpa HOM05D000287 ORTHO05D002423 4.8e-12 75.1 196 26.0
TAR633G1060 Trochodendron aralioides HOM05D000287 ORTHO05D002423 1.4e-11 73.6 89 39.3
Gohir.A06G179200 Gossypium hirsutum HOM05D000287 ORTHO05D002423 5.3e-11 71.6 89 36.0
Gorai.010G218500 Gossypium raimondii HOM05D000287 ORTHO05D002423 5.3e-11 71.6 89 36.0
TAR626G1790 Trochodendron aralioides HOM05D000287 ORTHO05D002423 5.3e-11 71.6 89 41.6
Gohir.D06G186200 Gossypium hirsutum HOM05D000287 ORTHO05D002423 9.0e-11 70.9 89 36.0
Hma1.2p1_2030F.1_g311800 Hydrangea macrophylla HOM05D000287 ORTHO05D002423 9.0e-11 70.9 89 38.2
Cpa.g.sc13.216 Carica papaya HOM05D000287 ORTHO05D002423 1.2e-10 70.5 72 45.8
MBI15_g08960_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 1.2e-10 70.5 89 40.4
Potri.019G057901 Populus trichocarpa HOM05D000287 ORTHO05D002423 2.0e-10 69.7 89 36.0
MD07G1233500 Malus domestica HOM05D000287 ORTHO05D002423 2.6e-10 69.3 220 26.8
Aqoxy1G03524 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 4.4e-10 68.6 67 43.3
FvH4_7g25900 Fragaria vesca HOM05D000287 ORTHO05D002423 7.6e-10 67.8 67 44.8
FAN03G0028 Fragaria x ananassa HOM05D000287 ORTHO05D002423 7.6e-10 67.8 67 44.8
FAN06G3748 Fragaria x ananassa HOM05D000287 ORTHO05D002423 7.6e-10 67.8 67 44.8
Dinv34526 Davidia involucrata HOM05D000287 ORTHO05D002423 1.3e-09 67.0 60 46.7
FAN10G1289 Fragaria x ananassa HOM05D000287 ORTHO05D002423 1.7e-09 66.6 67 44.8
FvH4_3g40490 Fragaria vesca HOM05D000287 ORTHO05D002423 2.2e-09 66.2 91 36.3
FAN11G2109 Fragaria x ananassa HOM05D000287 ORTHO05D002423 2.2e-09 66.2 91 36.3
FAN21G1691 Fragaria x ananassa HOM05D000287 ORTHO05D002423 2.2e-09 66.2 91 36.3
Lj1A966G37 Lonicera japonica HOM05D000287 ORTHO05D002423 2.2e-09 66.2 63 44.4
MBI15_g01591_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 2.2e-09 66.2 90 37.8
Potri.001G425675 Populus trichocarpa HOM05D000287 ORTHO05D002423 2.2e-09 66.2 173 27.2
GSVIVG01032686001 Vitis vinifera HOM05D000287 ORTHO05D002423 2.2e-09 66.2 89 39.3
Actinidia31625 Actinidia chinensis HOM05D000287 ORTHO05D002423 2.9e-09 65.9 67 41.8
CSS0016245 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D002423 2.9e-09 65.9 67 41.8
RcHm_v2.0_Chr1g0372211 Rosa chinensis HOM05D000287 ORTHO05D002423 2.9e-09 65.9 67 41.8
FAN25G0206 Fragaria x ananassa HOM05D000287 ORTHO05D002423 3.8e-09 65.5 91 36.3
MBI03_g15600_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 3.8e-09 65.5 89 33.7
MBI15_g01590_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 3.8e-09 65.5 71 38.0
MBI15_g27670_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 3.8e-09 65.5 71 38.0
FAN16G3152 Fragaria x ananassa HOM05D000287 ORTHO05D002423 4.9e-09 65.1 89 37.1
SEGI_40645 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 4.9e-09 65.1 190 23.2
CAN.G337.117 Capsicum annuum HOM05D000287 ORTHO05D002423 8.4e-09 64.3 183 25.7
COL.COLO4_19352 Corchorus olitorius HOM05D000287 ORTHO05D002423 1.1e-08 63.9 74 35.1
COL.COLO4_19358 Corchorus olitorius HOM05D000287 ORTHO05D002423 1.1e-08 63.9 73 35.6
SEGI_09434 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 1.1e-08 63.9 75 40.0
TAR623G0915 Trochodendron aralioides HOM05D000287 ORTHO05D002423 1.9e-08 63.2 89 31.5
Prupe.6G041300 Prunus persica HOM05D000287 ORTHO05D000319 3.2e-08 62.4 88 37.5
Atru.chr12.180 Acer truncatum HOM05D000287 ORTHO05D002423 4.2e-08 62.0 71 38.0
MBI03_g22422_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D000319 5.4e-08 61.6 89 32.6
Glyma.18G052400 Glycine max HOM05D000287 ORTHO05D002423 7.1e-08 61.2 90 37.8
VMungo0540G2026 Vigna mungo HOM05D000287 ORTHO05D002423 9.3e-08 60.8 90 36.7
Haze_24469 Corylus avellana HOM05D000287 ORTHO05D002423 1.2e-07 60.5 73 37.0
PSO017G4803 Papaver somniferum HOM05D000287 ORTHO05D002423 1.6e-07 60.1 57 38.6
PSO170G2234 Papaver somniferum HOM05D000287 ORTHO05D002423 1.6e-07 60.1 57 38.6
Peaxi162Scf00964g00142 Petunia axillaris HOM05D000287 ORTHO05D002423 1.6e-07 60.1 186 28.0
Phvul.008G235000 Phaseolus vulgaris HOM05D000287 ORTHO05D002423 2.1e-07 59.7 121 31.4
Aqoxy4G02418 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 2.7e-07 59.3 71 39.4
Phvul.006G078600 Phaseolus vulgaris HOM05D000287 ORTHO05D002423 2.7e-07 59.3 90 37.8
Psat2g013680 Pisum sativum HOM05D000287 ORTHO05D002423 2.7e-07 59.3 215 22.8
ATR0752G187 Amborella trichopoda HOM05D000287 ORTHO05D002423 3.5e-07 58.9 71 36.6
MD11G1053900 Malus domestica HOM05D000287 ORTHO05D002423 3.5e-07 58.9 91 31.9
Psat2g013720 Pisum sativum HOM05D000287 ORTHO05D002423 3.5e-07 58.9 91 30.8
Lj1A119G24 Lonicera japonica HOM05D000287 ORTHO05D002423 4.6e-07 58.5 88 33.0
TPR.G1197 Trifolium pratense HOM05D000287 ORTHO05D002423 4.6e-07 58.5 91 31.9
TWI39G0593 Tripterygium wilfordii HOM05D000287 ORTHO05D002423 4.6e-07 58.5 215 23.3
Glyma.09G144300 Glycine max HOM05D000287 ORTHO05D002423 6.0e-07 58.2 87 36.8
Potri.011G137950 Populus trichocarpa HOM05D000287 ORTHO05D002423 7.9e-07 57.8 177 23.7
Sed0017363 Sechium edule HOM05D000287 ORTHO05D002423 7.9e-07 57.8 91 30.8
Lj2A1101T52 Lonicera japonica HOM05D000287 ORTHO05D002423 1.3e-06 57.0 91 29.7
QL08p010722 Quercus lobata HOM05D000287 ORTHO05D002423 1.3e-06 57.0 191 28.8
SEGI_34469 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 1.3e-06 57.0 71 32.4
TPR.G28807 Trifolium pratense HOM05D000287 ORTHO05D002423 1.3e-06 57.0 90 33.3
Ca_06311_v3 Cicer arietinum L. HOM05D000287 ORTHO05D002423 1.7e-06 56.6 91 31.9
Medtr5g092150 Medicago truncatula HOM05D000287 ORTHO05D002423 1.7e-06 56.6 97 32.0
Oeu062592.1 Olea europaea HOM05D000287 ORTHO05D002423 1.7e-06 56.6 79 35.4
PGR004G2337 Punica granatum HOM05D000287 ORTHO05D002423 1.7e-06 56.6 72 40.3
SEGI_33175 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 1.7e-06 56.6 72 36.1
VMungo0647G0377 Vigna mungo HOM05D000287 ORTHO05D002423 1.7e-06 56.6 91 31.9
Nitab4.5_0001913g0090 Nicotiana tabacum HOM05D000287 ORTHO05D002423 2.3e-06 56.2 83 37.3
Aqoxy1G03950 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 3.0e-06 55.8 72 34.7
Eucgr.F00805 Eucalyptus grandis HOM05D000287 ORTHO05D002423 3.0e-06 55.8 73 30.1
Hma1.2p1_1271F.1_g271700 Hydrangea macrophylla HOM05D000287 ORTHO05D002423 3.9e-06 55.5 73 37.0
PSO017G3884 Papaver somniferum HOM05D000287 ORTHO05D002423 3.9e-06 55.5 72 30.6
FvH4_5g35780 Fragaria vesca HOM05D000287 ORTHO05D002423 5.1e-06 55.1 73 34.2
FAN08G0726 Fragaria x ananassa HOM05D000287 ORTHO05D002423 5.1e-06 55.1 73 34.2
FAN18G3592 Fragaria x ananassa HOM05D000287 ORTHO05D002423 5.1e-06 55.1 73 34.2
SEGI_01652 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 5.1e-06 55.1 75 30.7
SEGI_08385 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 5.1e-06 55.1 74 32.4
SEGI_24092 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 5.1e-06 55.1 75 30.7
TWI39G1051 Tripterygium wilfordii HOM05D000287 ORTHO05D002423 5.1e-06 55.1 73 34.2
Ca_15055_v3 Cicer arietinum L. HOM05D000287 ORTHO05D002423 6.6e-06 54.7 90 31.1
MD03G1204900 Malus domestica HOM05D000287 ORTHO05D002423 6.6e-06 54.7 218 22.5
RcHm_v2.0_Chr5g0039101 Rosa chinensis HOM05D000287 ORTHO05D002423 6.6e-06 54.7 73 34.2
Sopen07g032650 Solanum pennellii HOM05D000287 ORTHO05D002423 6.6e-06 54.7 71 35.2
Medtr3g467140 Medicago truncatula HOM05D000287 ORTHO05D002423 8.7e-06 54.3 93 31.2
SEGI_24884 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 8.7e-06 54.3 217 20.7
SEGI_41074 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 8.7e-06 54.3 75 33.3


User provided reference genes

Program Settings