Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 0.0e+00 1428.7 746 100.0
ATR0171G020 Amborella trichopoda HOM05D023641 ORTHO05D008103 6.5e-108 396.0 274 79.2
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 3.4e-104 383.6 586 41.3
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 2.4e-102 377.5 495 44.8
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 2.7e-98 364.0 371 53.6
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 3.6e-98 363.6 324 56.8
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 4.0e-97 360.1 388 51.3
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 6.8e-97 359.4 333 55.0
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.2e-96 358.6 344 52.6
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 5.7e-96 356.3 338 53.8
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 7.5e-96 355.9 271 60.9
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 6.3e-95 352.8 405 47.2
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 8.3e-95 352.4 353 52.7
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 8.3e-95 352.4 478 43.1
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 8.3e-95 352.4 429 45.9
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 1.1e-94 352.1 341 53.7
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.8e-94 351.3 345 51.6
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 7.0e-94 349.4 364 49.7
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 2.0e-93 347.8 415 46.7
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 2.7e-93 347.4 332 53.9
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 3.5e-93 347.1 408 47.5
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 5.9e-93 346.3 501 41.9
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 1.3e-92 345.1 364 49.2
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 2.3e-92 344.4 386 47.9
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.9e-92 344.0 502 40.0
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.8e-92 343.6 324 55.9
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 1.9e-91 341.3 325 53.8
ATR0171G031 Amborella trichopoda HOM05D023641 ORTHO05D008103 5.6e-91 339.7 262 74.4
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 5.6e-91 339.7 341 52.2
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 5.6e-91 339.7 338 51.8
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 5.6e-91 339.7 420 45.0
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 7.3e-91 339.3 321 52.6
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 9.5e-91 339.0 479 42.2
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 9.5e-91 339.0 357 49.0
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 6.1e-90 336.3 432 46.8
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.4e-89 335.1 334 53.0
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.8e-89 334.7 399 45.4
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.0e-89 334.0 318 52.8
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 6.8e-89 332.8 313 54.0
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 8.9e-89 332.4 332 51.5
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 1.2e-88 332.0 342 52.6
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.2e-88 332.0 334 51.8
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.5e-88 331.6 348 51.7
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 4.4e-88 330.1 341 51.6
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 4.4e-88 330.1 331 51.7
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 4.4e-88 330.1 473 42.5
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 5.7e-88 329.7 374 47.1
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 7.5e-88 329.3 383 47.8
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 7.5e-88 329.3 331 51.7
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 7.5e-88 329.3 374 47.1
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 9.8e-88 328.9 361 50.1
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.3e-87 328.6 331 51.7
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.3e-87 328.6 415 45.8
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.7e-87 327.0 373 48.3
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 3.7e-87 327.0 335 50.7
ATR1109G001 Amborella trichopoda HOM05D023641 ORTHO05D008103 4.9e-87 326.6 227 78.9
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 6.4e-87 326.2 417 44.1
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.4e-86 325.1 373 47.7
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 4.1e-86 323.6 344 49.7
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 9.2e-86 322.4 333 50.2
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.0e-84 318.9 379 47.0
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 8.6e-84 315.8 382 46.3
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.5e-83 315.1 346 49.7
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 3.3e-83 313.9 341 50.4
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 3.3e-83 313.9 347 49.3
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 9.5e-83 312.4 271 56.5
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 2.1e-82 311.2 574 36.9
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 6.2e-82 309.7 335 51.6
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 1.0e-81 308.9 322 49.4
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.8e-81 308.1 439 41.0
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 6.8e-81 306.2 332 50.9
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 1.4e-78 298.5 562 37.5
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 3.2e-78 297.4 442 40.5
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 2.0e-77 294.7 509 37.9
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.0e-77 294.7 290 52.4
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 3.5e-77 293.9 511 39.3
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.9e-76 290.4 252 56.7
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.9e-76 290.4 252 56.7
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 6.6e-76 289.7 252 56.3
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 6.6e-76 289.7 252 56.3
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.9e-75 288.1 416 41.6
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 5.6e-75 286.6 352 44.9
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.7e-71 275.0 395 41.5
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 2.9e-71 274.2 276 51.8
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 2.7e-69 267.7 204 60.3
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 4.6e-69 266.9 325 42.8
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 1.3e-68 265.4 218 58.3
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 2.3e-68 264.6 173 69.4
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 4.7e-66 256.9 450 38.9
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 8.1e-66 256.1 305 47.5
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.4e-65 255.4 342 43.0
ATR0123G002 Amborella trichopoda HOM05D023641 ORTHO05D008103 1.8e-65 255.0 153 86.3
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 8.9e-65 252.7 326 43.9
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 3.8e-63 247.3 300 45.7
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.4e-62 245.4 269 48.3
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 1.4e-62 245.4 379 41.4
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.6e-60 236.5 409 37.2
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.1e-57 229.2 508 34.8
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 4.0e-57 227.3 253 44.3
ATR0495G003 Amborella trichopoda HOM05D006714 ORTHO05D008103 7.6e-56 223.0 186 76.3
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 9.9e-56 222.6 248 50.0
ATR0171G025 Amborella trichopoda HOM05D006714 ORTHO05D008103 3.2e-54 217.6 206 70.4
ATR1084G001 Amborella trichopoda HOM05D006714 ORTHO05D008103 9.6e-51 206.1 178 75.3
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.6e-50 205.3 173 59.0
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 4.8e-50 203.8 183 54.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.2e-48 199.1 205 51.2
ATR0123G001 Amborella trichopoda HOM05D023641 ORTHO05D008103 1.9e-46 191.8 132 78.8
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.5e-43 182.2 113 72.6
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 3.1e-41 174.5 278 37.8
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.2e-40 172.6 116 65.5
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 8.4e-31 139.8 229 36.2
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 1.0e-23 116.3 334 30.5
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.0e-16 92.0 186 37.6
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.0e-16 92.0 186 37.6
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.2e-13 82.8 262 32.1
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.0e-12 79.7 137 37.2


User provided reference genes

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