Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.3e-168 596.3 293 100.0
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.6e-78 297.0 210 65.7
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 8.9e-77 291.2 221 63.3
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.2e-76 290.8 258 57.4
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.4e-76 289.3 207 61.8
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 5.8e-76 288.5 235 58.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.2e-75 286.6 217 62.7
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.9e-75 286.2 273 53.1
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 2.9e-75 286.2 245 58.0
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.7e-75 285.8 224 59.4
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 3.2e-74 282.7 217 59.9
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 4.1e-74 282.3 220 60.0
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 5.4e-74 282.0 253 55.7
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.2e-73 280.8 259 56.0
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.6e-73 280.4 233 56.2
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.7e-73 279.6 202 61.9
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.3e-72 277.3 270 52.6
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 3.3e-71 272.7 213 61.5
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 9.5e-71 271.2 269 51.7
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.6e-70 270.4 214 57.0
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.1e-70 270.0 208 62.5
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.8e-70 269.6 211 58.3
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 6.2e-70 268.5 213 59.6
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.1e-70 268.1 204 58.8
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 4.0e-69 265.8 213 59.2
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 4.0e-69 265.8 230 53.9
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 5.2e-69 265.4 215 60.0
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 6.8e-69 265.0 229 53.7
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.2e-68 264.2 244 52.0
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.5e-68 263.8 215 60.0
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.5e-68 263.8 212 59.4
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 1.5e-68 263.8 256 51.6
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 2.0e-68 263.5 181 69.1
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 2.6e-68 263.1 225 56.0
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 3.4e-68 262.7 214 58.9
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 4.4e-68 262.3 253 52.2
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 7.5e-68 261.5 269 50.6
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 7.5e-68 261.5 213 54.9
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 7.5e-68 261.5 214 57.9
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 9.9e-68 261.2 206 57.3
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.3e-67 260.8 208 59.1
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.3e-67 260.8 209 56.5
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.3e-67 260.8 207 58.0
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 2.2e-67 260.0 266 47.4
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 4.9e-67 258.8 214 57.0
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 4.9e-67 258.8 207 57.5
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 4.9e-67 258.8 208 56.2
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 8.3e-67 258.1 207 57.5
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.1e-66 257.7 201 57.7
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.1e-66 257.7 260 51.2
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.4e-66 257.3 229 54.1
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.4e-66 257.3 208 57.2
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.4e-66 256.5 272 47.8
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.4e-66 256.5 228 55.3
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 3.2e-66 256.1 207 58.5
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 3.2e-66 256.1 207 58.5
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 4.1e-66 255.8 282 51.1
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 4.1e-66 255.8 229 53.7
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 7.1e-66 255.0 208 55.8
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.2e-65 254.2 239 52.7
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.6e-65 253.8 287 48.8
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 2.1e-65 253.4 229 53.3
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 7.8e-65 251.5 213 54.9
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.0e-64 251.1 194 59.3
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.0e-64 251.1 254 49.2
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 1.0e-64 251.1 202 56.4
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 3.0e-64 249.6 213 55.4
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.5e-63 247.3 257 46.7
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.2e-62 244.2 241 48.1
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 2.1e-62 243.4 216 54.2
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 3.1e-61 239.6 185 61.6
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.5e-60 237.3 205 57.6
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 7.6e-60 235.0 184 62.0
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.7e-59 233.8 214 55.6
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 7.1e-58 228.4 181 59.1
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 6.0e-57 225.3 221 51.1
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 3.0e-56 223.0 215 54.0
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.9e-55 220.3 179 57.5
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.3e-54 217.6 228 51.8
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 9.0e-53 211.5 218 48.6
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 3.4e-52 209.5 245 45.3
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 4.4e-52 209.1 186 53.8
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 5.4e-50 202.2 215 48.4
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 9.3e-50 201.4 213 46.9
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 2.5e-47 193.4 188 54.3
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.3e-46 191.0 141 60.3
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 1.4e-45 187.6 185 50.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.3e-40 171.0 272 37.9
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.3e-40 171.0 140 55.0
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 4.8e-38 162.5 203 40.9
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 3.3e-31 139.8 110 57.3
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 2.8e-30 136.7 104 60.6
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.2e-30 135.2 155 46.5
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 3.1e-29 133.3 199 38.7
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 5.0e-27 125.9 166 42.2
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 8.4e-27 125.2 119 52.1
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 7.9e-25 118.6 145 41.4
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.9e-18 97.4 122 41.8
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.2e-18 96.7 102 50.0
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 2.7e-17 93.6 208 32.2
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.5e-15 87.8 94 45.7
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 4.3e-15 86.3 191 30.4
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 3.4e-12 76.6 78 51.3


User provided reference genes

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