Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0153G033 Amborella trichopoda HOM05D000868 ORTHO05D000711 4.7e-21 103.6 52 100.0
ATR0122G030 Amborella trichopoda HOM05D000868 ORTHO05D000711 4.0e-20 100.5 51 98.0
Rhsim06G0083400 Rhododendron simsii HOM05D000868 ORTHO05D000711 2.3e-12 74.7 51 70.6
Actinidia10314 Actinidia chinensis HOM05D000868 ORTHO05D000711 3.0e-12 74.3 51 68.6
Phvul.008G172500 Phaseolus vulgaris HOM05D000868 ORTHO05D000711 4.0e-12 73.9 51 66.7
Nn5g29083 Nelumbo nucifera HOM05D000868 ORTHO05D000711 5.2e-12 73.6 51 66.7
Rhsim10G0159600 Rhododendron simsii HOM05D000868 ORTHO05D000711 6.8e-12 73.2 51 64.7
vmacro12950 Vaccinium macrocarpon HOM05D000868 ORTHO05D000711 6.8e-12 73.2 51 66.7
Glyma.13G088400 Glycine max HOM05D000868 ORTHO05D000711 1.5e-11 72.0 51 66.7
MBI05_g32451_MAGBIO Magnolia biondii HOM05D000868 ORTHO05D000711 2.0e-11 71.6 51 66.7
TPR.G22756 Trifolium pratense HOM05D000868 ORTHO05D000711 2.0e-11 71.6 51 68.6
GSVIVG01009014001 Vitis vinifera HOM05D000868 ORTHO05D000711 2.0e-11 71.6 51 68.6
Thecc.08G109000 Theobroma cacao HOM05D000868 ORTHO05D000711 2.6e-11 71.2 51 62.7
Medtr5g063200 Medicago truncatula HOM05D000868 ORTHO05D000711 3.4e-11 70.9 51 64.7
TAR628G0123 Trochodendron aralioides HOM05D000868 ORTHO05D000711 3.4e-11 70.9 51 64.7
Lj1g0027991 Lotus japonicus HOM05D000868 ORTHO05D000711 4.4e-11 70.5 51 66.7
GSVIVG01005875001 Vitis vinifera HOM05D000868 ORTHO05D000711 4.4e-11 70.5 51 62.7
Nn1g05326 Nelumbo nucifera HOM05D000868 ORTHO05D000711 5.7e-11 70.1 51 64.7
Psat5g138400 Pisum sativum HOM05D000868 ORTHO05D000711 7.5e-11 69.7 51 62.7
arahy.Tifrunner.gnm1.ann1.GHPW0M Arachis hypogaea HOM05D000868 ORTHO05D000711 9.8e-11 69.3 51 66.7
arahy.Tifrunner.gnm1.ann1.TNW0AK Arachis hypogaea HOM05D000868 ORTHO05D000711 9.8e-11 69.3 51 66.7
COL.COLO4_16426 Corchorus olitorius HOM05D000868 ORTHO05D000711 9.8e-11 69.3 51 62.7
Glyma.14G171800 Glycine max HOM05D000868 ORTHO05D000711 9.8e-11 69.3 51 64.7
TAR376G1205 Trochodendron aralioides HOM05D000868 ORTHO05D000711 9.8e-11 69.3 51 64.7
vmacro21242 Vaccinium macrocarpon HOM05D000868 ORTHO05D000711 9.8e-11 69.3 51 64.7
CSS0033323 Camellia sinensis var. sinensis HOM05D000868 ORTHO05D000711 1.3e-10 68.9 51 62.7
Lj1g0006022 Lotus japonicus HOM05D000868 ORTHO05D000711 1.3e-10 68.9 51 64.7
Lalb_Chr17g0344151 Lupinus albus HOM05D000868 ORTHO05D000711 1.7e-10 68.6 51 60.8
Duzib116G0246 Durio zibethinus HOM05D000868 ORTHO05D000711 2.2e-10 68.2 51 58.8
Ca_15244_v3 Cicer arietinum L. HOM05D000868 ORTHO05D000711 2.8e-10 67.8 51 62.7
Ciclev10003462m.g Citrus clementina HOM05D000868 ORTHO05D000711 2.8e-10 67.8 51 62.7
CSS0029296 Camellia sinensis var. sinensis HOM05D000868 ORTHO05D000711 3.7e-10 67.4 51 62.7
Cpa.g.sc36.120 Carica papaya HOM05D000868 ORTHO05D000711 3.7e-10 67.4 51 62.7
Lalb_Chr10g0102291 Lupinus albus HOM05D000868 ORTHO05D000711 3.7e-10 67.4 51 62.7
arahy.Tifrunner.gnm1.ann1.T2PW0J Arachis hypogaea HOM05D000868 ORTHO05D000711 4.8e-10 67.0 51 60.8
Psat2g073120 Pisum sativum HOM05D000868 ORTHO05D000711 4.8e-10 67.0 51 62.7
Phvul.009G030000 Phaseolus vulgaris HOM05D000868 ORTHO05D000711 8.3e-10 66.2 51 60.8
VMungo1309G2959 Vigna mungo HOM05D000868 ORTHO05D000711 8.3e-10 66.2 51 60.8
CANSAT25G1712 Cannabis sativa HOM05D000868 ORTHO05D000711 1.1e-09 65.9 50 58.0
Gohir.A06G036600 Gossypium hirsutum HOM05D000868 ORTHO05D000711 1.1e-09 65.9 51 56.9
Gohir.D06G037400 Gossypium hirsutum HOM05D000868 ORTHO05D000711 1.1e-09 65.9 51 56.9
Gorai.010G042300 Gossypium raimondii HOM05D000868 ORTHO05D000711 1.1e-09 65.9 51 56.9
Lalb_Chr11g0065481 Lupinus albus HOM05D000868 ORTHO05D000711 1.1e-09 65.9 51 60.8
MD08G1181000 Malus domestica HOM05D000868 ORTHO05D000711 1.1e-09 65.9 51 62.7
Medtr3g074230 Medicago truncatula HOM05D000868 ORTHO05D000711 1.1e-09 65.9 51 62.7
Glyma.04G103400 Glycine max HOM05D000868 ORTHO05D000711 1.4e-09 65.5 51 60.8
Lalb_Chr08g0241991 Lupinus albus HOM05D000868 ORTHO05D000711 1.4e-09 65.5 51 60.8
Manes.02G153700 Manihot esculenta HOM05D000868 ORTHO05D000711 1.4e-09 65.5 51 60.8
Manes.18G068500 Manihot esculenta HOM05D000868 ORTHO05D000711 1.4e-09 65.5 51 58.8
VMungo0647G0391 Vigna mungo HOM05D000868 ORTHO05D000711 1.4e-09 65.5 49 57.1
Glyma.06G104600 Glycine max HOM05D000868 ORTHO05D000711 1.8e-09 65.1 51 58.8
PSO210G3812 Papaver somniferum HOM05D000868 ORTHO05D000711 1.8e-09 65.1 50 52.0
arahy.Tifrunner.gnm1.ann1.IDN2QB Arachis hypogaea HOM05D000868 ORTHO05D000711 2.4e-09 64.7 51 58.8
Dinv21920 Davidia involucrata HOM05D000868 ORTHO05D000711 2.4e-09 64.7 51 58.8
Haze_22251 Corylus avellana HOM05D000868 ORTHO05D000711 3.1e-09 64.3 51 58.8
Dinv16296 Davidia involucrata HOM05D000868 ORTHO05D000711 3.1e-09 64.3 51 56.9
MD15G1366600 Malus domestica HOM05D000868 ORTHO05D000711 3.1e-09 64.3 51 58.8
AUR62027733 Chenopodium quinoa HOM05D000868 ORTHO05D000711 4.1e-09 63.9 51 58.8
Sc23g0000120 Simmondsia chinensis HOM05D000868 ORTHO05D000711 4.1e-09 63.9 49 63.3
PSO781G0072 Papaver somniferum HOM05D000868 ORTHO05D000711 5.4e-09 63.5 53 60.4
CiPaw.08G044100 Carya illinoinensis HOM05D000868 ORTHO05D000711 7.0e-09 63.2 51 58.8
QL12p036437 Quercus lobata HOM05D000868 ORTHO05D000711 7.0e-09 63.2 50 58.0
EL10Ac1g01248 Beta vulgaris HOM05D000868 ORTHO05D000711 9.1e-09 62.8 51 58.8
FvH4_5g37700 Fragaria vesca HOM05D000868 ORTHO05D000711 9.1e-09 62.8 49 59.2
Cc07_g15350 Coffea canephora HOM05D000868 ORTHO05D000711 1.2e-08 62.4 51 54.9
Actinidia12567 Actinidia chinensis HOM05D000868 ORTHO05D000711 1.6e-08 62.0 51 54.9
RcHm_v2.0_Chr7g0239431 Rosa chinensis HOM05D000868 ORTHO05D000711 1.6e-08 62.0 49 59.2
Ca_26418_v3 Cicer arietinum L. HOM05D000868 ORTHO05D000711 2.0e-08 61.6 42 66.7
Hund16275 Selenicereus undatus HOM05D000868 ORTHO05D000711 2.0e-08 61.6 51 56.9
PSO447G0102 Papaver somniferum HOM05D000868 ORTHO05D000711 3.5e-08 60.8 49 51.0
Potri.005G166300 Populus trichocarpa HOM05D000868 ORTHO05D000711 3.5e-08 60.8 49 57.1
SEGI_24568 Sequoiadendron giganteum HOM05D000868 ORTHO05D000711 3.5e-08 60.8 48 58.3
SEGI_05378 Sequoiadendron giganteum HOM05D000868 ORTHO05D000711 7.7e-08 59.7 49 57.1
ClCG11G015350 Citrullus lanatus HOM05D000868 ORTHO05D000711 1.0e-07 59.3 51 56.9
Pp3c13_23280 Physcomitrium patens HOM05D000868 ORTHO05D000711 1.0e-07 59.3 49 57.1
Pp3c3_16150 Physcomitrium patens HOM05D000868 ORTHO05D000711 1.0e-07 59.3 49 59.2
ATR0210G030 Amborella trichopoda HOM05D000868 ORTHO05D000711 1.3e-07 58.9 49 53.1
AUR62002020 Chenopodium quinoa HOM05D000868 ORTHO05D000711 1.3e-07 58.9 51 56.9
Sabra05G0125300 Salix brachista HOM05D000868 ORTHO05D000711 1.3e-07 58.9 49 55.1
MSTRG.23337 Avicennia marina HOM05D000868 ORTHO05D000711 1.7e-07 58.5 50 56.0
EL10Ac6g15090 Beta vulgaris HOM05D000868 ORTHO05D000711 1.7e-07 58.5 51 52.9
CiPaw.07G181100 Carya illinoinensis HOM05D000868 ORTHO05D000711 1.7e-07 58.5 51 51.0
DCAR_012731 Daucus carota HOM05D000868 ORTHO05D000711 1.7e-07 58.5 46 58.7
MELO3C010417.2 Cucumis melo HOM05D000868 ORTHO05D000711 2.2e-07 58.2 51 54.9
CsaV3_4G028740 Cucumis sativus L. HOM05D000868 ORTHO05D000711 2.2e-07 58.2 51 54.9
Nitab4.5_0000383g0260 Nicotiana tabacum HOM05D000868 ORTHO05D000711 2.2e-07 58.2 49 49.0
Sed0025375 Sechium edule HOM05D000868 ORTHO05D000711 2.2e-07 58.2 51 54.9
Sc16g0005580 Simmondsia chinensis HOM05D000868 ORTHO05D000711 2.2e-07 58.2 46 65.2
Dinv14978 Davidia involucrata HOM05D000868 ORTHO05D000711 3.8e-07 57.4 49 51.0
Migut.H02366 Erythranthe guttata HOM05D000868 ORTHO05D000711 3.8e-07 57.4 47 55.3
Ah.02g122160 Amaranthus hybridus HOM05D000868 ORTHO05D000711 5.0e-07 57.0 51 52.9
CDE03G0374 Ceratophyllum demersum HOM05D000868 ORTHO05D000711 5.0e-07 57.0 48 52.1
CDE04G1902 Ceratophyllum demersum HOM05D000868 ORTHO05D000711 5.0e-07 57.0 48 52.1
DCAR_013147 Daucus carota HOM05D000868 ORTHO05D000711 6.5e-07 56.6 51 47.1
SGA_v2.0_scaffold54G19494 Striga asiatica HOM05D000868 ORTHO05D000711 6.5e-07 56.6 46 60.9
vmacro11924 Vaccinium macrocarpon HOM05D000868 ORTHO05D000711 6.5e-07 56.6 49 49.0
Lj8A150T51 Lonicera japonica HOM05D000868 ORTHO05D000711 8.5e-07 56.2 49 49.0
Rhsim06G0206600 Rhododendron simsii HOM05D000868 ORTHO05D000711 8.5e-07 56.2 49 49.0
Lalb_Chr19g0133861 Lupinus albus HOM05D000868 ORTHO05D000711 1.5e-06 55.5 49 53.1
Actinidia30764 Actinidia chinensis HOM05D000868 ORTHO05D000711 1.9e-06 55.1 37 67.6
Aqoxy5G02000 Aquilegia oxysepala HOM05D000868 ORTHO05D000711 1.9e-06 55.1 51 49.0
SalBow3G3501 Salvia bowleyana HOM05D000868 ORTHO05D000711 1.9e-06 55.1 48 54.2
Lalb_Chr01g0006791 Lupinus albus HOM05D000868 ORTHO05D000711 2.5e-06 54.7 49 53.1
Nn1g09115 Nelumbo nucifera HOM05D000868 ORTHO05D000711 2.5e-06 54.7 49 51.0
vmacro09498 Vaccinium macrocarpon HOM05D000868 ORTHO05D000711 2.5e-06 54.7 49 49.0
GSVIVG01020699001 Vitis vinifera HOM05D000868 ORTHO05D000711 2.5e-06 54.7 49 49.0
CSS0047552 Camellia sinensis var. sinensis HOM05D000868 ORTHO05D000711 3.2e-06 54.3 49 49.0
Rhsim04G0024900 Rhododendron simsii HOM05D000868 ORTHO05D000711 3.2e-06 54.3 49 49.0
arahy.Tifrunner.gnm1.ann1.1494UG Arachis hypogaea HOM05D000868 ORTHO05D000711 4.2e-06 53.9 49 49.0
arahy.Tifrunner.gnm1.ann1.CNXW4V Arachis hypogaea HOM05D000868 ORTHO05D000711 4.2e-06 53.9 49 49.0
TAR624G0292 Trochodendron aralioides HOM05D000868 ORTHO05D000711 4.2e-06 53.9 49 51.0
Ca_03995_v3 Cicer arietinum L. HOM05D000868 ORTHO05D000711 5.5e-06 53.5 49 49.0
Medtr2g078020 Medicago truncatula HOM05D000868 ORTHO05D000711 5.5e-06 53.5 49 49.0
Solyc07g062580.4 Solanum lycopersicum HOM05D000868 ORTHO05D000711 5.5e-06 53.5 49 46.9
Sopen07g030810 Solanum pennellii HOM05D000868 ORTHO05D000711 5.5e-06 53.5 49 46.9
TPR.G30901 Trifolium pratense HOM05D000868 ORTHO05D000711 5.5e-06 53.5 49 49.0
Atru.chr13.1212 Acer truncatum HOM05D000868 ORTHO05D000711 7.2e-06 53.1 38 63.2
CAN.G1119.9 Capsicum annuum HOM05D000868 ORTHO05D000711 7.2e-06 53.1 51 47.1
Oeu031040.1 Olea europaea HOM05D000868 ORTHO05D000711 7.2e-06 53.1 49 46.9
Oeu031216.1 Olea europaea HOM05D000868 ORTHO05D000711 7.2e-06 53.1 49 40.8
Hund13635 Selenicereus undatus HOM05D000868 ORTHO05D000711 7.2e-06 53.1 46 54.3
Hund22768 Selenicereus undatus HOM05D000868 ORTHO05D000711 7.2e-06 53.1 49 46.9
TWI38G0132 Tripterygium wilfordii HOM05D000868 ORTHO05D000711 7.2e-06 53.1 49 49.0
TAR626G0826 Trochodendron aralioides HOM05D000868 ORTHO05D000711 7.2e-06 53.1 49 49.0
Actinidia18794 Actinidia chinensis HOM05D000868 ORTHO05D000711 9.5e-06 52.8 49 46.9
EL10Ac4g08291 Beta vulgaris HOM05D000868 ORTHO05D000711 9.5e-06 52.8 49 46.9
Ciclev10014480m.g Citrus clementina HOM05D000868 ORTHO05D000711 9.5e-06 52.8 49 49.0
Hma1.2p1_1016F.1_g248195 Hydrangea macrophylla HOM05D000868 ORTHO05D000711 9.5e-06 52.8 49 44.9
Lj3g0007240 Lotus japonicus HOM05D000868 ORTHO05D000711 9.5e-06 52.8 51 47.1
Manes.01G133400 Manihot esculenta HOM05D000868 ORTHO05D000711 9.5e-06 52.8 51 47.1
Nitab4.5_0002252g0080 Nicotiana tabacum HOM05D000868 ORTHO05D000711 9.5e-06 52.8 44 52.3
Sc16g0007500 Simmondsia chinensis HOM05D000868 ORTHO05D000711 9.5e-06 52.8 49 44.9


User provided reference genes

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