Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0150G027 Amborella trichopoda HOM05D029511 ORTHO05D026542 6.4e-40 167.2 97 100.0
ATR0739G059 Amborella trichopoda HOM05D000202 ORTHO05D000117 1.7e-16 89.4 59 69.5
ATR0064G040 Amborella trichopoda HOM05D029511 ORTHO05D026542 6.7e-13 77.4 80 65.0
ATR0739G139 Amborella trichopoda HOM05D000202 ORTHO05D000117 8.7e-13 77.0 59 67.8
ATR0589G079 Amborella trichopoda HOM05D029511 ORTHO05D026542 4.3e-12 74.7 63 65.1
ATR0064G006 Amborella trichopoda HOM05D029511 ORTHO05D026542 2.2e-11 72.4 80 53.8
QL03p013163 Quercus lobata HOM05D000202 ORTHO05D000117 5.9e-09 64.3 59 45.8
QL03p073351 Quercus lobata HOM05D000202 ORTHO05D000117 7.6e-09 63.9 59 47.5
Phvul.011G199900 Phaseolus vulgaris HOM05D000202 ORTHO05D000117 8.5e-08 60.5 58 50.0
Migut.N00727 Erythranthe guttata HOM05D000202 ORTHO05D000117 1.1e-07 60.1 55 43.6
FAN22G0376 Fragaria x ananassa HOM05D000202 ORTHO05D000117 1.4e-07 59.7 58 51.7
PGR044G0302 Punica granatum HOM05D000202 ORTHO05D000117 1.4e-07 59.7 57 43.9
FvH4_4g29332 Fragaria vesca HOM05D000202 ORTHO05D000117 1.9e-07 59.3 58 51.7
FvH4_4g29333 Fragaria vesca HOM05D000202 ORTHO05D000117 1.9e-07 59.3 58 51.7
arahy.Tifrunner.gnm1.ann1.TE2GMD Arachis hypogaea HOM05D000202 ORTHO05D000117 2.5e-07 58.9 57 45.6
VMungo1127G2194 Vigna mungo HOM05D000202 ORTHO05D000117 2.5e-07 58.9 58 46.6
Aa31sc25G110 Aethionema arabicum HOM05D000202 ORTHO05D000117 3.2e-07 58.5 60 46.7
arahy.Tifrunner.gnm1.ann1.S5LCZ5 Arachis hypogaea HOM05D000202 ORTHO05D000117 3.2e-07 58.5 57 45.6
Haze_11866 Corylus avellana HOM05D000202 ORTHO05D000117 3.2e-07 58.5 57 43.9
Dinv15583 Davidia involucrata HOM05D000202 ORTHO05D000117 3.2e-07 58.5 55 45.5
Manes.05G113100 Manihot esculenta HOM05D000202 ORTHO05D000117 3.2e-07 58.5 55 45.5
PGR044G1508 Punica granatum HOM05D000202 ORTHO05D000117 3.2e-07 58.5 57 42.1
TAR376G0073 Trochodendron aralioides HOM05D000202 ORTHO05D000117 3.2e-07 58.5 59 49.2
AUR62002449 Chenopodium quinoa HOM05D000202 ORTHO05D000117 5.5e-07 57.8 58 46.6
COL.COLO4_08808 Corchorus olitorius HOM05D000202 ORTHO05D000117 5.5e-07 57.8 57 47.4
Migut.E01052 Erythranthe guttata HOM05D000202 ORTHO05D000117 5.5e-07 57.8 55 47.3
Migut.E01676 Erythranthe guttata HOM05D000202 ORTHO05D000117 5.5e-07 57.8 55 47.3
HanXRQChr15g0476141 Helianthus annuus HOM05D000202 ORTHO05D000117 5.5e-07 57.8 55 43.6
RcHm_v2.0_Chr7g0233341 Rosa chinensis HOM05D000202 ORTHO05D000117 5.5e-07 57.8 58 50.0
EL10Ac3g06846 Beta vulgaris HOM05D000202 ORTHO05D000117 7.2e-07 57.4 58 43.1
Haze_11862 Corylus avellana HOM05D000202 ORTHO05D000117 7.2e-07 57.4 57 43.9
DCAR_006601 Daucus carota HOM05D000202 ORTHO05D000117 7.2e-07 57.4 59 45.8
HanXRQChr17g0550661 Helianthus annuus HOM05D000202 ORTHO05D000117 7.2e-07 57.4 55 43.6
VMungo1127G2178 Vigna mungo HOM05D000202 ORTHO05D000117 7.2e-07 57.4 62 46.8
Thecc.07G136400 Theobroma cacao HOM05D000202 ORTHO05D000117 9.3e-07 57.0 59 45.8
Ah.10g029930 Amaranthus hybridus HOM05D000202 ORTHO05D000117 1.2e-06 56.6 55 49.1
Ah.13g073260 Amaranthus hybridus HOM05D000202 ORTHO05D000117 1.2e-06 56.6 58 48.3
MBI03_g35424_MAGBIO Magnolia biondii HOM05D000202 ORTHO05D000117 1.2e-06 56.6 55 50.9
MBI03_g42685_MAGBIO Magnolia biondii HOM05D000202 ORTHO05D000117 1.2e-06 56.6 55 50.9
Medtr0071s0010 Medicago truncatula HOM05D000202 ORTHO05D000117 1.2e-06 56.6 61 42.6
Medtr3g046670 Medicago truncatula HOM05D000202 ORTHO05D000117 1.2e-06 56.6 61 42.6
PGR044G1396 Punica granatum HOM05D000202 ORTHO05D000117 1.2e-06 56.6 57 40.4
PGR044G2539 Punica granatum HOM05D000202 ORTHO05D000117 1.2e-06 56.6 57 40.4
Sc06g0006410 Simmondsia chinensis HOM05D000202 ORTHO05D000117 1.2e-06 56.6 59 47.5
THA.LOC104799331 Tarenaya hassleriana HOM05D000202 ORTHO05D000117 1.2e-06 56.6 59 44.1
Aa31sc25G60 Aethionema arabicum HOM05D000202 ORTHO05D000117 1.6e-06 56.2 60 45.0
BcaB07g30652 Brassica carinata HOM05D000202 ORTHO05D000117 1.6e-06 56.2 55 47.3
BcaB07g30655 Brassica carinata HOM05D000202 ORTHO05D000117 1.6e-06 56.2 55 47.3
HanXRQChr15g0476371 Helianthus annuus HOM05D000202 ORTHO05D000117 1.6e-06 56.2 55 43.6
HanXRQChr17g0550671 Helianthus annuus HOM05D000202 ORTHO05D000117 1.6e-06 56.2 55 43.6
Potri.010G138450 Populus trichocarpa HOM05D000202 ORTHO05D000117 1.6e-06 56.2 55 47.3
THA.LOC104809914 Tarenaya hassleriana HOM05D000202 ORTHO05D000117 1.6e-06 56.2 59 42.4
TWI34G1928 Tripterygium wilfordii HOM05D000202 ORTHO05D000117 1.6e-06 56.2 56 46.4
BcaC04g21451 Brassica carinata HOM05D000202 ORTHO05D000117 2.1e-06 55.8 59 44.1
C09p31630 Brassica napus HOM05D000202 ORTHO05D000117 2.1e-06 55.8 59 44.1
BolC9t56019H Brassica oleracea HOM05D000202 ORTHO05D000117 2.1e-06 55.8 59 44.1
CiPaw.05G122100 Carya illinoinensis HOM05D000202 ORTHO05D000117 2.1e-06 55.8 57 45.6
Eucgr.C03239 Eucalyptus grandis HOM05D000202 ORTHO05D000117 2.1e-06 55.8 57 47.4
FAN10G2064 Fragaria x ananassa HOM05D000202 ORTHO05D000117 2.1e-06 55.8 59 47.5
MBI03_g29280_MAGBIO Magnolia biondii HOM05D000202 ORTHO05D000117 2.1e-06 55.8 55 50.9
TAR374G1128 Trochodendron aralioides HOM05D000202 ORTHO05D000117 2.1e-06 55.8 59 47.5
Atru.chr12.1241 Acer truncatum HOM05D000202 ORTHO05D000117 2.7e-06 55.5 59 42.4
BcaB07g30649 Brassica carinata HOM05D000202 ORTHO05D000117 2.7e-06 55.5 55 43.6
BcaB07g30656 Brassica carinata HOM05D000202 ORTHO05D000117 2.7e-06 55.5 55 47.3
A03p03060 Brassica napus HOM05D000202 ORTHO05D000117 2.7e-06 55.5 59 44.1
A09p24620 Brassica napus HOM05D000202 ORTHO05D000117 2.7e-06 55.5 55 47.3
BraA03t09663Z Brassica rapa HOM05D000202 ORTHO05D000117 2.7e-06 55.5 59 44.1
CiPaw.05G047500 Carya illinoinensis HOM05D000202 ORTHO05D000117 2.7e-06 55.5 91 33.0
DCAR_030368 Daucus carota HOM05D000202 ORTHO05D000117 2.7e-06 55.5 59 37.3
Eucgr.C03130 Eucalyptus grandis HOM05D000202 ORTHO05D000117 2.7e-06 55.5 57 47.4
Eucgr.C03136 Eucalyptus grandis HOM05D000202 ORTHO05D000117 2.7e-06 55.5 57 47.4
FvH4_7g13441 Fragaria vesca HOM05D000202 ORTHO05D000117 2.7e-06 55.5 57 50.9
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 2.7e-06 55.5 57 50.9
FAN06G3261 Fragaria x ananassa HOM05D000202 ORTHO05D000117 2.7e-06 55.5 57 50.9
Phvul.011G198600 Phaseolus vulgaris HOM05D000202 ORTHO05D000117 2.7e-06 55.5 57 43.9
Prupe.2G043800 Prunus persica HOM05D000202 ORTHO05D000117 2.7e-06 55.5 65 43.1
VMungo1127G0506 Vigna mungo HOM05D000202 ORTHO05D000117 2.7e-06 55.5 57 45.6
EL10Ac3g05955 Beta vulgaris HOM05D000202 ORTHO05D000117 3.6e-06 55.1 58 43.1
A09p24680 Brassica napus HOM05D000202 ORTHO05D000117 3.6e-06 55.1 55 45.5
A09p24720 Brassica napus HOM05D000202 ORTHO05D000117 3.6e-06 55.1 59 44.1
BraA09t38058Z Brassica rapa HOM05D000202 ORTHO05D000117 3.6e-06 55.1 59 44.1
CANSAT25G1579 Cannabis sativa HOM05D000202 ORTHO05D000117 3.6e-06 55.1 63 42.9
CiPaw.05G121900 Carya illinoinensis HOM05D000202 ORTHO05D000117 3.6e-06 55.1 57 45.6
Haze_11861 Corylus avellana HOM05D000202 ORTHO05D000117 3.6e-06 55.1 57 43.9
ECA246G1554 Erigeron canadensis HOM05D000202 ORTHO05D000117 3.6e-06 55.1 56 42.9
Eucgr.K03444 Eucalyptus grandis HOM05D000202 ORTHO05D000117 3.6e-06 55.1 60 45.0
HanXRQChr15g0475581 Helianthus annuus HOM05D000202 ORTHO05D000117 3.6e-06 55.1 55 45.5
MBI03_g45377_MAGBIO Magnolia biondii HOM05D000202 ORTHO05D000117 3.6e-06 55.1 55 49.1
Potri.003G189066 Populus trichocarpa HOM05D000202 ORTHO05D000117 3.6e-06 55.1 57 43.9
Potri.010G138501 Populus trichocarpa HOM05D000202 ORTHO05D000117 3.6e-06 55.1 55 45.5
VMungo1127G1199 Vigna mungo HOM05D000202 ORTHO05D000117 3.6e-06 55.1 58 43.1
Ah.01g010500 Amaranthus hybridus HOM05D000202 ORTHO05D000117 4.6e-06 54.7 58 43.1
BcaB01g06012 Brassica carinata HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 44.1
C03p03450 Brassica napus HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 44.1
BolC3t12887H Brassica oleracea HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 44.1
CiPaw.05G121700 Carya illinoinensis HOM05D000202 ORTHO05D000117 4.6e-06 54.7 57 43.9
AUR62023740 Chenopodium quinoa HOM05D000202 ORTHO05D000117 4.6e-06 54.7 56 46.4
Eucgr.J00069 Eucalyptus grandis HOM05D000202 ORTHO05D000117 4.6e-06 54.7 61 42.6
Potri.003G188800 Populus trichocarpa HOM05D000202 ORTHO05D000117 4.6e-06 54.7 58 39.7
Prupe.1G293200 Prunus persica HOM05D000202 ORTHO05D000117 4.6e-06 54.7 55 47.3
PGR044G1860 Punica granatum HOM05D000202 ORTHO05D000117 4.6e-06 54.7 60 46.7
QL05p086278 Quercus lobata HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 42.4
QL05p086646 Quercus lobata HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 42.4
QL05p086798 Quercus lobata HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 42.4
QL05p087219 Quercus lobata HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 42.4
QL05p087311 Quercus lobata HOM05D000202 ORTHO05D000117 4.6e-06 54.7 59 42.4
Sabra03G0138400 Salix brachista HOM05D000202 ORTHO05D000117 4.6e-06 54.7 58 39.7
Atru.chr2.2241 Acer truncatum HOM05D000202 ORTHO05D000117 6.1e-06 54.3 57 43.9
arahy.Tifrunner.gnm1.ann1.3CP25B Arachis hypogaea HOM05D000202 ORTHO05D000117 6.1e-06 54.3 55 45.5
BcaC04g21463 Brassica carinata HOM05D000202 ORTHO05D000117 6.1e-06 54.3 55 47.3
C09p31510 Brassica napus HOM05D000202 ORTHO05D000117 6.1e-06 54.3 55 47.3
BolC9t56008H Brassica oleracea HOM05D000202 ORTHO05D000117 6.1e-06 54.3 55 47.3
CiPaw.05G045300 Carya illinoinensis HOM05D000202 ORTHO05D000117 6.1e-06 54.3 59 45.8
AUR62031703 Chenopodium quinoa HOM05D000202 ORTHO05D000117 6.1e-06 54.3 58 44.8
Glyma.13G198300 Glycine max HOM05D000202 ORTHO05D000117 6.1e-06 54.3 58 46.6
Hma1.2p1_0428F.1_g150840 Hydrangea macrophylla HOM05D000202 ORTHO05D000117 6.1e-06 54.3 55 41.8
EL10Ac1g01301 Beta vulgaris HOM05D000202 ORTHO05D000117 7.9e-06 53.9 56 42.9
Ciclev10003688m.g Citrus clementina HOM05D000202 ORTHO05D000117 7.9e-06 53.9 66 42.4
Cc08_g04970 Coffea canephora HOM05D000202 ORTHO05D000117 7.9e-06 53.9 54 42.6
Hma1.2p1_0428F.1_g151000 Hydrangea macrophylla HOM05D000202 ORTHO05D000117 7.9e-06 53.9 55 36.4
Lj3g0007653 Lotus japonicus HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 43.9
Lj3g0019482 Lotus japonicus HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 42.1
Phvul.011G198900 Phaseolus vulgaris HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 43.9
Phvul.011G199600 Phaseolus vulgaris HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 43.9
Psat4g118600 Pisum sativum HOM05D000202 ORTHO05D000117 7.9e-06 53.9 54 44.4
Sabra01G0025400 Salix brachista HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 43.9
Thecc.05G242100 Theobroma cacao HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 45.6
Thecc.10G160500 Theobroma cacao HOM05D000202 ORTHO05D000117 7.9e-06 53.9 57 45.6


User provided reference genes

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