Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0150G019 Amborella trichopoda HOM05D005295 ORTHO05D005962 3.4e-121 438.3 222 100.0
SEGI_06803 Sequoiadendron giganteum HOM05D005295 ORTHO05D005962 1.7e-51 206.8 219 47.9
Phvul.005G075000 Phaseolus vulgaris HOM05D005295 ORTHO05D005962 2.5e-47 193.0 225 46.7
MBI02_g22345_MAGBIO Magnolia biondii HOM05D005295 ORTHO05D005962 4.3e-47 192.2 235 47.2
VMungo1080G0752 Vigna mungo HOM05D005295 ORTHO05D005962 5.6e-47 191.8 225 47.1
CiPaw.11G171800 Carya illinoinensis HOM05D005295 ORTHO05D005962 1.2e-46 190.7 232 47.0
GSVIVG01014296001 Vitis vinifera HOM05D005295 ORTHO05D005962 4.7e-46 188.7 234 46.2
Aqoxy1G02337 Aquilegia oxysepala HOM05D005295 ORTHO05D005962 6.2e-46 188.3 243 45.3
Nn1g04175 Nelumbo nucifera HOM05D005295 ORTHO05D005962 8.0e-46 188.0 249 44.2
Mapoly0124s0020 Marchantia polymorpha HOM05D005295 ORTHO05D005962 1.0e-45 187.6 211 46.0
Glyma.13G273800 Glycine max HOM05D005295 ORTHO05D005962 1.4e-45 187.2 226 45.1
CANSAT56G1083 Cannabis sativa HOM05D005295 ORTHO05D005962 2.3e-45 186.4 242 43.4
Hma1.2p1_0387F.1_g141920 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 2.3e-45 186.4 223 46.6
Potri.001G396900 Populus trichocarpa HOM05D005295 ORTHO05D005962 6.8e-45 184.9 234 44.4
Thecc.07G095500 Theobroma cacao HOM05D005295 ORTHO05D005962 6.8e-45 184.9 241 42.3
Potri.011G116200 Populus trichocarpa HOM05D005295 ORTHO05D005962 1.2e-44 184.1 228 44.7
CSS0001236 Camellia sinensis var. sinensis HOM05D005295 ORTHO05D005962 2.0e-44 183.3 248 42.7
Manes.03G106500 Manihot esculenta HOM05D005295 ORTHO05D005962 2.0e-44 183.3 233 45.1
Sabra16G0260000 Salix brachista HOM05D005295 ORTHO05D005962 2.0e-44 183.3 238 43.7
Lalb_Chr20g0109501 Lupinus albus HOM05D005295 ORTHO05D005962 2.6e-44 183.0 227 44.5
Duzib213G0204 Durio zibethinus HOM05D005295 ORTHO05D005962 4.4e-44 182.2 242 42.6
Cpa.g.sc622.2 Carica papaya HOM05D005295 ORTHO05D005962 5.8e-44 181.8 234 41.9
THA.LOC104811877 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 5.8e-44 181.8 230 42.6
Lj3g0021836 Lotus japonicus HOM05D005295 ORTHO05D005962 7.5e-44 181.4 228 43.0
ECA234G3281 Erigeron canadensis HOM05D005295 ORTHO05D005962 9.8e-44 181.0 243 44.4
Lsat_1_v5_gn_5_128440 Lactuca sativa HOM05D005295 ORTHO05D005962 9.8e-44 181.0 251 43.8
TWI38G0013 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 9.8e-44 181.0 241 43.2
MD03G1231400 Malus domestica HOM05D005295 ORTHO05D005962 1.3e-43 180.6 234 42.7
Migut.M00784 Erythranthe guttata HOM05D005295 ORTHO05D005962 1.7e-43 180.3 241 43.2
Oeu019302.2 Olea europaea HOM05D005295 ORTHO05D005962 1.7e-43 180.3 245 40.8
TWI39G0015 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 1.7e-43 180.3 240 42.1
Prupe.4G176600 Prunus persica HOM05D005295 ORTHO05D005962 2.2e-43 179.9 233 44.2
CDE05G1939 Ceratophyllum demersum HOM05D005295 ORTHO05D005962 3.7e-43 179.1 237 43.0
Cc05_g11790 Coffea canephora HOM05D005295 ORTHO05D005962 3.7e-43 179.1 245 41.6
Medtr2g078650 Medicago truncatula HOM05D005295 ORTHO05D005962 3.7e-43 179.1 227 43.2
SMO285G0011 Selaginella moellendorffii HOM05D005295 ORTHO05D005962 3.7e-43 179.1 208 41.8
COL.COLO4_36711 Corchorus olitorius HOM05D005295 ORTHO05D005962 8.3e-43 177.9 242 42.1
arahy.Tifrunner.gnm1.ann1.B1NQ7W Arachis hypogaea HOM05D005295 ORTHO05D005962 1.1e-42 177.6 234 42.7
Gohir.A04G035200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 1.1e-42 177.6 243 42.4
PSO675G2991 Papaver somniferum HOM05D005295 ORTHO05D005962 1.4e-42 177.2 260 41.9
Actinidia12794 Actinidia chinensis HOM05D005295 ORTHO05D005962 1.9e-42 176.8 232 43.5
MELO3C025603.2 Cucumis melo HOM05D005295 ORTHO05D005962 1.9e-42 176.8 230 42.6
Gorai.009G376000 Gossypium raimondii HOM05D005295 ORTHO05D005962 1.9e-42 176.8 242 42.1
SGA_v2.0_scaffold34G13800 Striga asiatica HOM05D005295 ORTHO05D005962 4.1e-42 175.6 234 42.7
arahy.Tifrunner.gnm1.ann1.3CLR9I Arachis hypogaea HOM05D005295 ORTHO05D005962 5.4e-42 175.3 234 41.9
Haze_09452 Corylus avellana HOM05D005295 ORTHO05D005962 9.2e-42 174.5 238 41.6
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 1.2e-41 174.1 229 43.7
CsaV3_4G033520 Cucumis sativus L. HOM05D005295 ORTHO05D005962 1.2e-41 174.1 230 41.7
Sabra11G0101800 Salix brachista HOM05D005295 ORTHO05D005962 2.0e-41 173.3 228 43.4
Sopen12g005670 Solanum pennellii HOM05D005295 ORTHO05D005962 3.5e-41 172.6 246 43.5
PGSC0003DMG400015366 Solanum tuberosum HOM05D005295 ORTHO05D005962 4.6e-41 172.2 250 43.2
Psat0s1402g0040 Pisum sativum HOM05D005295 ORTHO05D005962 7.8e-41 171.4 223 42.6
Solyc12g013910.2 Solanum lycopersicum HOM05D005295 ORTHO05D005962 7.8e-41 171.4 247 43.3
Ca_03531_v3 Cicer arietinum L. HOM05D005295 ORTHO05D005962 1.0e-40 171.0 232 41.8
HanXRQChr12g0361161 Helianthus annuus HOM05D005295 ORTHO05D005962 1.3e-40 170.6 250 41.6
SalBow8G4458 Salvia bowleyana HOM05D005295 ORTHO05D005962 1.3e-40 170.6 243 42.4
Pp3c9_10810 Physcomitrium patens HOM05D005295 ORTHO05D005962 1.7e-40 170.2 208 41.3
Ciclev10009383m.g Citrus clementina HOM05D005295 ORTHO05D005962 2.3e-40 169.9 224 41.5
Aa31LG5G9970 Aethionema arabicum HOM05D005295 ORTHO05D005962 3.0e-40 169.5 228 41.7
Sp7g25480 Schrenkiella parvula HOM05D005295 ORTHO05D005962 5.0e-40 168.7 238 40.3
ClCG11G017890 Citrullus lanatus HOM05D005295 ORTHO05D005962 6.6e-40 168.3 240 40.8
SGA_v2.0_scaffold73G24237 Striga asiatica HOM05D005295 ORTHO05D005962 6.6e-40 168.3 236 41.5
Eucgr.F01159 Eucalyptus grandis HOM05D005295 ORTHO05D005962 1.9e-39 166.8 238 39.9
Sed0001385 Sechium edule HOM05D005295 ORTHO05D005962 1.9e-39 166.8 232 40.9
Cfa020562 Carpinus fangiana HOM05D005295 ORTHO05D005962 3.3e-39 166.0 247 39.3
Peaxi162Scf00000g00314 Petunia axillaris HOM05D005295 ORTHO05D005962 4.3e-39 165.6 247 40.5
TPR.G7946 Trifolium pratense HOM05D005295 ORTHO05D005962 5.6e-39 165.2 214 42.1
CAN.G213.18 Capsicum annuum HOM05D005295 ORTHO05D005962 7.3e-39 164.9 254 40.2
Ah.06g184530 Amaranthus hybridus HOM05D005295 ORTHO05D005962 1.6e-38 163.7 252 38.9
PGR083G0729 Punica granatum HOM05D005295 ORTHO05D005962 1.6e-38 163.7 230 40.0
unitig_0.g1149 Utricularia gibba HOM05D005295 ORTHO05D005962 2.8e-38 162.9 241 39.0
Rhsim06G0201600 Rhododendron simsii HOM05D005295 ORTHO05D005962 3.6e-38 162.5 238 42.0
BraA01t01821Z Brassica rapa HOM05D005295 ORTHO05D005962 4.7e-38 162.2 233 39.5
Ciclev10009380m.g Citrus clementina HOM05D005295 ORTHO05D005962 4.7e-38 162.2 222 40.1
Thhalv10026112m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 6.2e-38 161.8 238 38.7
Hund22882 Selenicereus undatus HOM05D005295 ORTHO05D005962 8.1e-38 161.4 259 37.1
AL7G25230 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 1.4e-37 160.6 238 39.1
Lj8A154T78 Lonicera japonica HOM05D005295 ORTHO05D005962 1.8e-37 160.2 255 38.4
EL10Ac4g08225 Beta vulgaris HOM05D005295 ORTHO05D005962 2.3e-37 159.8 247 38.9
Carub.0007s1331 Capsella rubella HOM05D005295 ORTHO05D005962 2.3e-37 159.8 235 39.1
CARHR235220 Cardamine hirsuta HOM05D005295 ORTHO05D005962 3.1e-37 159.5 239 39.3
BolC1t02323H Brassica oleracea HOM05D005295 ORTHO05D005962 4.0e-37 159.1 239 38.5
C01p23710 Brassica napus HOM05D005295 ORTHO05D005962 5.2e-37 158.7 239 38.1
AUR62036172 Chenopodium quinoa HOM05D005295 ORTHO05D005962 6.8e-37 158.3 253 38.3
A01p18770 Brassica napus HOM05D005295 ORTHO05D005962 8.9e-37 157.9 240 37.9
AT4G27540 Arabidopsis thaliana HOM05D005295 ORTHO05D005962 1.2e-36 157.5 238 38.2
BcaNung06687 Brassica carinata HOM05D005295 ORTHO05D005962 1.2e-36 157.5 239 38.1
BcaNung06688 Brassica carinata HOM05D005295 ORTHO05D005962 1.2e-36 157.5 240 37.9
Atru.chr2.2424 Acer truncatum HOM05D005295 ORTHO05D005962 3.4e-36 156.0 258 38.4
Gohir.D05G348200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 3.7e-35 152.5 242 38.4
HPP92_003730 Vanilla planifolia HOM05D005295 ORTHO05D005962 6.4e-35 151.8 239 39.3
FAN21G0215 Fragaria x ananassa HOM05D005295 ORTHO05D005962 1.1e-34 151.0 239 37.7
Zm00001eb231100 Zea mays HOM05D005295 ORTHO05D005962 1.1e-34 151.0 246 37.0
FvH4_3g19520 Fragaria vesca HOM05D005295 ORTHO05D005962 1.9e-34 150.2 239 38.1
FAN25G2205 Fragaria x ananassa HOM05D005295 ORTHO05D005962 1.9e-34 150.2 239 37.2
DCAR_013119 Daucus carota HOM05D005295 ORTHO05D005962 3.2e-34 149.4 201 40.8
RcHm_v2.0_Chr5g0032761 Rosa chinensis HOM05D005295 ORTHO05D005962 3.2e-34 149.4 243 38.7
MSTRG.6822 Avicennia marina HOM05D005295 ORTHO05D005962 2.1e-33 146.7 195 41.5
Nitab4.5_0000332g0010 Nicotiana tabacum HOM05D005295 ORTHO05D005962 1.3e-32 144.1 264 38.3
FAN11G0135 Fragaria x ananassa HOM05D005295 ORTHO05D005962 3.9e-32 142.5 235 37.9
Sc16g0007150 Simmondsia chinensis HOM05D005295 ORTHO05D005962 3.9e-32 142.5 223 37.2
BolC2t07912H Brassica oleracea HOM05D005295 ORTHO05D005962 1.5e-31 140.6 226 35.8
BcaC03g14369 Brassica carinata HOM05D005295 ORTHO05D005962 2.8e-30 136.3 231 34.6
BcaB05g22086 Brassica carinata HOM05D005295 ORTHO05D005962 4.7e-30 135.6 223 35.0
C02p17850 Brassica napus HOM05D005295 ORTHO05D005962 2.0e-28 130.2 226 34.1
AUR62019458 Chenopodium quinoa HOM05D005295 ORTHO05D005962 2.6e-28 129.8 239 36.4
QL08p022700 Quercus lobata HOM05D005295 ORTHO05D005962 1.7e-27 127.1 353 27.5
BcaC03g14372 Brassica carinata HOM05D005295 ORTHO05D005962 1.9e-26 123.6 228 34.2
BolC2t07916H Brassica oleracea HOM05D005295 ORTHO05D005962 1.9e-26 123.6 228 34.2
A02p10710 Brassica napus HOM05D005295 ORTHO05D005962 1.1e-23 114.4 214 33.2
C02p17830 Brassica napus HOM05D005295 ORTHO05D005962 4.3e-23 112.5 172 34.9
BraA02t06134Z Brassica rapa HOM05D005295 ORTHO05D005962 4.3e-23 112.5 214 33.2
Thhalv10015755m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 5.2e-21 105.5 157 38.9
Os09g0134400 Oryza sativa ssp. japonica HOM05D005295 ORTHO05D005962 2.6e-20 103.2 220 31.8
AagrBONN_evm.TU.Sc2ySwM_117.1842 Anthoceros agrestis HOM05D005295 ORTHO05D005962 4.4e-20 102.4 139 41.7
Eucgr.F01198 Eucalyptus grandis HOM05D005295 ORTHO05D005962 5.8e-20 102.1 142 41.5
vmacro11885 Vaccinium macrocarpon HOM05D005295 ORTHO05D005962 1.3e-19 100.9 220 33.6
Dinv14935 Davidia involucrata HOM05D005295 ORTHO05D005962 2.1e-17 93.6 137 42.3
Lj1C840T8 Lonicera japonica HOM05D005295 ORTHO05D005962 1.3e-16 90.9 129 42.6
CBR_g39602 Chara braunii HOM05D005295 ORTHO05D005962 1.5e-15 87.4 277 27.4
Ciclev10010240m.g Citrus clementina HOM05D005295 ORTHO05D005962 3.1e-13 79.7 221 29.0
Dinv12314 Davidia involucrata HOM05D005295 ORTHO05D005962 1.7e-11 73.9 132 35.6
MD06G1175000 Malus domestica HOM05D005295 ORTHO05D005962 1.6e-09 67.4 108 38.0
BcaNung07036 Brassica carinata HOM05D005295 ORTHO05D005962 5.1e-08 62.4 81 38.3
BcaC09g48479 Brassica carinata HOM05D005295 ORTHO05D005962 1.6e-06 57.4 127 32.3
BolC1t04893H Brassica oleracea HOM05D005295 ORTHO05D005962 1.6e-06 57.4 127 32.3
A01p38800 Brassica napus HOM05D005295 ORTHO05D005962 2.1e-06 57.0 127 31.5
BraA01t03927Z Brassica rapa HOM05D005295 ORTHO05D005962 2.1e-06 57.0 127 31.5
C01p49340 Brassica napus HOM05D005295 ORTHO05D005962 3.6e-06 56.2 127 31.5


User provided reference genes

Program Settings