Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 7.0e-223 776.9 383 100.0
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 2.4e-106 389.8 363 55.4
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 3.5e-105 386.0 344 56.1
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 3.5e-105 386.0 344 56.1
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 7.7e-105 384.8 315 60.6
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 2.5e-103 379.8 309 59.2
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 5.5e-103 378.6 293 63.1
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 3.6e-102 375.9 371 52.6
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 3.6e-102 375.9 378 54.5
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 3.0e-101 372.9 361 55.4
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.5e-100 370.5 366 53.6
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 7.5e-100 368.2 354 54.2
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 9.8e-100 367.9 367 52.6
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.7e-99 365.9 371 52.0
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 6.3e-99 365.2 313 57.2
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 8.3e-99 364.8 353 52.7
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 2.4e-98 363.2 324 53.7
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 3.1e-98 362.8 352 53.7
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 3.1e-98 362.8 381 53.5
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 4.1e-98 362.5 366 52.2
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 1.6e-97 360.5 308 57.1
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 1.6e-97 360.5 309 55.7
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 4.5e-97 359.0 331 55.3
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 5.9e-97 358.6 309 57.3
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 7.7e-97 358.2 337 51.9
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.3e-96 357.5 363 53.2
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 1.7e-96 357.1 311 55.0
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 2.9e-96 356.3 370 53.2
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 8.6e-96 354.8 353 52.7
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 1.1e-95 354.4 311 55.3
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.9e-95 353.6 322 55.3
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 4.3e-95 352.4 354 52.5
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 7.3e-95 351.7 312 57.7
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 1.2e-94 350.9 366 52.5
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.2e-94 350.9 305 57.4
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.6e-94 350.5 375 49.1
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 1.6e-94 350.5 397 48.4
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 1.0e-93 347.8 320 54.1
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 2.3e-93 346.7 351 53.0
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 3.0e-93 346.3 362 50.3
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 4.0e-93 345.9 312 53.8
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 6.8e-93 345.1 311 56.3
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 6.8e-93 345.1 311 56.3
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.2e-92 344.4 380 48.9
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 2.6e-92 343.2 364 51.9
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 2.6e-92 343.2 386 47.4
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 9.8e-92 341.3 290 56.2
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 1.3e-91 340.9 311 57.2
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 2.2e-91 340.1 343 53.1
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 2.9e-91 339.7 336 54.2
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 1.1e-90 337.8 349 51.3
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 2.4e-90 336.7 390 47.2
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 3.2e-90 336.3 369 49.6
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 4.1e-90 335.9 363 51.2
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 9.2e-90 334.7 293 54.9
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 9.2e-90 334.7 356 50.3
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.2e-89 334.3 386 47.7
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.6e-89 334.0 395 49.1
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 1.6e-89 334.0 322 55.6
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 2.0e-89 333.6 368 49.7
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.7e-89 333.2 310 54.5
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 2.7e-89 333.2 354 50.3
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 4.6e-89 332.4 321 53.9
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.3e-88 330.9 284 58.8
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.3e-88 330.1 392 48.5
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 8.6e-88 328.2 365 49.3
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 8.6e-88 328.2 328 53.7
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 1.5e-87 327.4 313 52.4
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 3.3e-87 326.2 292 54.5
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 3.3e-87 326.2 275 57.1
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 5.6e-87 325.5 380 48.4
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 7.3e-87 325.1 308 54.2
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 6.8e-85 318.5 371 48.8
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 3.4e-84 316.2 357 51.5
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 5.8e-84 315.5 353 52.1
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 2.9e-83 313.2 362 47.0
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 4.9e-83 312.4 320 49.7
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.1e-82 311.2 319 50.2
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.9e-82 310.5 312 53.2
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 4.1e-82 309.3 355 46.5
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 5.4e-82 308.9 366 46.4
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 7.0e-82 308.5 339 50.1
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 3.5e-81 306.2 351 47.0
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 6.0e-81 305.4 352 45.5
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 7.8e-81 305.1 368 46.5
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 2.8e-78 296.6 322 46.6
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.1e-77 294.7 352 45.2
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 5.2e-77 292.4 376 44.1
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 1.5e-76 290.8 365 43.8
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 2.6e-76 290.0 367 43.6
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 4.4e-76 289.3 384 43.2
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 7.5e-76 288.5 352 45.2
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 1.3e-75 287.7 394 43.7
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 8.3e-75 285.0 353 45.3
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.7e-73 280.0 234 57.7
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 4.3e-71 272.7 233 60.9
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.2e-70 271.2 351 43.9
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.8e-70 270.0 220 61.4
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 2.3e-69 266.9 229 59.8
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 5.8e-68 262.3 323 44.3
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 2.8e-54 216.9 189 58.7
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.8e-51 206.5 237 46.4
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 7.1e-50 202.2 310 38.7
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 3.3e-47 193.4 173 53.2
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 7.4e-47 192.2 197 48.7
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 2.8e-46 190.3 319 36.7
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.4e-45 187.2 247 42.9
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 4.0e-45 186.4 167 56.3
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.7e-41 173.7 236 37.3
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.6e-38 164.5 187 48.7
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 6.2e-38 162.5 189 49.2
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 4.0e-37 159.8 145 55.2
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 5.3e-37 159.5 245 37.1
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 4.2e-34 149.8 259 37.8
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.8e-32 144.4 191 44.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 3.0e-32 143.7 227 32.6
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 5.7e-31 139.4 259 36.3
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 9.6e-31 138.7 288 35.1
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.8e-30 137.1 256 37.5
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 2.2e-27 127.5 287 32.4
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 3.2e-26 123.6 143 48.3
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.2e-26 123.2 136 50.0
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 2.7e-25 120.6 137 48.2
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.1e-21 108.6 171 36.8
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 4.2e-18 96.7 141 36.9
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 6.3e-06 56.2 127 33.9


User provided reference genes

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