Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 2.1e-208 728.8 363 100.0
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 8.6e-146 520.8 356 71.3
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 7.2e-145 517.7 345 75.1
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 2.3e-143 512.7 353 71.4
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 1.5e-142 510.0 350 73.4
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 2.0e-142 509.6 348 72.7
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 4.4e-142 508.4 350 72.0
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 9.8e-142 507.3 350 72.3
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 1.3e-141 506.9 326 76.7
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.3e-141 506.9 375 70.1
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 2.8e-141 505.8 341 75.7
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 4.9e-141 505.0 350 72.3
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 6.3e-141 504.6 355 72.4
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 1.4e-140 503.4 326 75.8
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 2.4e-140 502.7 326 76.1
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 5.4e-140 501.5 350 70.6
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 7.0e-140 501.1 351 71.8
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 9.2e-140 500.7 345 71.6
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 9.2e-140 500.7 350 70.3
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 1.6e-139 500.0 340 71.2
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 2.0e-139 499.6 353 70.3
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 2.7e-139 499.2 349 70.8
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 3.5e-139 498.8 340 72.4
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 3.5e-139 498.8 340 72.6
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 3.5e-139 498.8 350 72.3
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 1.3e-138 496.9 340 74.1
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 1.3e-138 496.9 313 76.0
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 1.3e-138 496.9 307 78.5
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.7e-138 496.5 346 72.0
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 3.8e-138 495.4 304 78.9
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 5.0e-138 495.0 346 72.0
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 5.0e-138 495.0 342 72.2
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 6.6e-138 494.6 341 74.5
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 8.6e-138 494.2 350 69.7
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 8.6e-138 494.2 324 75.0
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.5e-137 492.7 304 78.3
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 2.5e-137 492.7 335 72.8
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 4.3e-137 491.9 351 69.8
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 7.3e-137 491.1 302 79.1
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 7.3e-137 491.1 347 68.9
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 7.3e-137 491.1 344 70.6
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 1.2e-136 490.3 333 73.9
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 2.8e-136 489.2 306 77.5
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 4.7e-136 488.4 302 79.5
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 4.7e-136 488.4 352 69.6
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 8.0e-136 487.6 339 70.8
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 1.0e-135 487.3 357 69.2
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 3.0e-135 485.7 335 71.6
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 4.0e-135 485.3 312 74.7
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 6.8e-135 484.6 325 72.0
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 2.0e-134 483.0 302 76.8
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 5.8e-134 481.5 347 68.3
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 7.5e-134 481.1 327 71.6
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 7.5e-134 481.1 380 66.1
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 7.5e-134 481.1 320 73.8
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 9.8e-134 480.7 351 68.1
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 1.3e-133 480.3 319 74.0
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 1.7e-133 479.9 354 66.7
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 2.2e-133 479.6 354 66.7
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 4.9e-133 478.4 319 73.4
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 6.4e-133 478.0 304 75.3
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 3.2e-132 475.7 319 72.4
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 3.2e-132 475.7 317 72.6
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 7.0e-132 474.6 319 72.7
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 7.0e-132 474.6 319 72.4
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 9.2e-132 474.2 319 72.7
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 1.2e-131 473.8 315 72.4
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 1.2e-131 473.8 302 75.8
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 2.0e-131 473.0 319 72.7
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 4.6e-131 471.9 381 63.3
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 1.0e-130 470.7 320 71.9
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 1.0e-130 470.7 305 75.4
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 1.3e-130 470.3 320 71.6
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 1.3e-130 470.3 320 71.6
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 8.6e-130 467.6 387 64.9
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 3.3e-129 465.7 319 72.4
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 6.2e-128 461.5 327 69.7
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 1.5e-126 456.8 348 65.2
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 3.4e-126 455.7 384 63.8
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 3.4e-126 455.7 324 72.2
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 5.8e-126 454.9 314 72.9
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 4.6e-123 445.3 359 64.9
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 3.3e-121 439.1 280 75.0
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 4.0e-119 432.2 303 67.3
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 6.8e-119 431.4 304 65.5
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 6.8e-119 431.4 304 65.5
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 5.8e-118 428.3 309 65.0
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 9.2e-116 421.0 319 66.1
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 3.0e-114 416.0 319 66.8
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 3.6e-112 409.1 269 74.7
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 6.2e-112 408.3 277 72.6
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 1.6e-107 393.7 313 64.5
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 3.9e-98 362.5 264 69.3
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 1.3e-96 357.5 281 63.7
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 1.3e-93 347.4 319 52.4
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 1.7e-93 347.1 253 70.4
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 1.5e-89 334.0 306 51.3
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 1.5e-81 307.4 184 81.5
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 2.5e-81 306.6 260 60.8
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 3.3e-81 306.2 241 64.7
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.3e-77 294.3 328 50.6
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 3.8e-77 292.7 309 48.2
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 1.6e-75 287.3 241 58.1
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 5.0e-69 265.8 226 61.1
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 9.1e-63 245.0 204 61.8
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 4.2e-60 236.1 216 61.1
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.6e-57 226.9 125 82.4
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.6e-57 226.9 125 82.4
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 5.2e-50 202.6 122 75.4
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 5.2e-50 202.6 122 75.4
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 2.0e-46 190.7 149 65.8
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 1.9e-44 184.1 181 56.4
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 1.4e-39 167.9 104 72.1
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 9.1e-39 165.2 298 38.3
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.0e-38 164.1 308 32.1
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 5.7e-33 146.0 138 58.0
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 4.1e-31 139.8 79 83.5
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 6.6e-29 132.5 97 69.1
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 9.5e-28 128.6 117 59.8
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 2.0e-25 120.9 144 48.6
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 6.3e-24 115.9 185 37.8
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 1.6e-22 111.3 71 69.0
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 3.5e-22 110.2 97 61.9
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 2.9e-21 107.1 150 46.0
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 7.3e-20 102.4 110 50.0
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 1.2e-14 85.1 89 53.9
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 1.6e-14 84.7 188 31.9
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 1.5e-12 78.2 50 74.0
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 5.6e-12 76.3 64 57.8
Lj1g0008117 Lotus japonicus HOM05D001625 ORTHO05D008114 1.2e-06 58.5 222 27.0
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.6e-06 58.2 58 51.7
COL.COLO4_26276 Corchorus olitorius HOM05D000089 ORTHO05D000726 2.7e-06 57.4 322 24.8


User provided reference genes

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