Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0149G001 Amborella trichopoda HOM05D033261 ORTHO05D003557 0.0e+00 1825.1 995 100.0
ATR0536G001 Amborella trichopoda HOM05D033261 ORTHO05D003557 2.2e-63 248.4 134 97.8
ATR1089G154 Amborella trichopoda HOM05D033261 ORTHO05D003557 1.6e-16 92.8 161 44.7
Lsat_1_v5_gn_3_37901 Lactuca sativa HOM05D004299 ORTHO05D003557 8.4e-10 70.5 205 32.7
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 5.4e-09 67.8 104 46.2
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 9.3e-09 67.0 113 48.7
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 9.3e-09 67.0 111 46.8
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 1.6e-08 66.2 150 38.0
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 2.1e-08 65.9 222 34.2
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 2.1e-08 65.9 110 41.8
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 2.1e-08 65.9 112 45.5
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 2.7e-08 65.5 100 41.0
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 6.0e-08 64.3 112 45.5
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 1.0e-07 63.5 85 47.1
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 1.0e-07 63.5 184 29.9
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 1.0e-07 63.5 109 42.2
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 1.3e-07 63.2 222 32.4
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 1.3e-07 63.2 99 48.5
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 1.3e-07 63.2 109 41.3
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 1.3e-07 63.2 147 36.1
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 1.7e-07 62.8 100 39.0
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 1.7e-07 62.8 73 50.7
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 1.7e-07 62.8 114 44.7
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 2.3e-07 62.4 84 46.4
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 3.0e-07 62.0 110 43.6
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 3.0e-07 62.0 78 50.0
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 3.9e-07 61.6 178 31.5
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 3.9e-07 61.6 113 38.9
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 5.1e-07 61.2 107 40.2
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 5.1e-07 61.2 94 46.8
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 6.6e-07 60.8 94 46.8
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 6.6e-07 60.8 105 41.0
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 6.6e-07 60.8 123 37.4
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 6.6e-07 60.8 104 43.3
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 1.1e-06 60.1 98 41.8
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 1.1e-06 60.1 94 45.7
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.1e-06 60.1 114 39.5
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 1.1e-06 60.1 107 39.3
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 1.5e-06 59.7 155 36.8
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 1.5e-06 59.7 102 41.2
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 1.9e-06 59.3 97 40.2
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 1.9e-06 59.3 140 33.6
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 1.9e-06 59.3 165 32.1
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 1.9e-06 59.3 102 45.1
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 3.3e-06 58.5 96 41.7
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 3.3e-06 58.5 167 26.9
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 3.3e-06 58.5 175 34.9
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 3.3e-06 58.5 118 39.0
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 3.3e-06 58.5 114 38.6
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 4.3e-06 58.2 119 39.5
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 4.3e-06 58.2 102 40.2
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 4.3e-06 58.2 101 39.6
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 5.6e-06 57.8 138 34.8
ECA246G3276 Erigeron canadensis HOM05D004299 ORTHO05D003557 5.6e-06 57.8 154 33.8
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 5.6e-06 57.8 79 44.3
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 5.6e-06 57.8 101 38.6
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 5.6e-06 57.8 100 44.0
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 7.3e-06 57.4 101 45.5
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 7.3e-06 57.4 121 38.0
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 9.6e-06 57.0 176 34.1


User provided reference genes

Program Settings