Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.8e-305 1050.0 516 100.0
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 4.9e-155 552.0 551 52.8
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 7.1e-154 548.1 553 51.0
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.7e-153 546.2 553 51.9
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 6.4e-147 525.0 552 48.7
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 2.1e-145 520.0 553 50.1
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 2.7e-145 519.6 553 51.5
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.3e-144 516.5 554 48.9
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 3.0e-144 516.2 554 49.8
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 3.3e-143 512.7 553 49.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 7.4e-143 511.5 553 48.8
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.3e-142 510.8 553 49.9
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.7e-142 509.2 553 49.7
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 8.2e-142 508.1 554 49.6
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 1.8e-141 506.9 553 49.4
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.4e-141 506.5 553 49.2
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 3.8e-139 499.2 558 48.4
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.9e-139 498.8 553 49.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 6.5e-139 498.4 579 47.3
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 2.1e-137 493.4 561 48.8
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.5e-137 492.7 553 47.4
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 4.6e-137 492.3 561 48.7
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 1.0e-136 491.1 553 47.9
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.3e-136 490.0 576 44.3
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 3.0e-136 489.6 552 47.5
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.1e-135 487.6 555 47.2
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.1e-135 487.6 552 47.1
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.5e-135 486.5 553 48.1
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 5.7e-135 485.3 552 47.8
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.2e-134 483.4 556 45.0
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 6.3e-134 481.9 554 45.1
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 6.3e-134 481.9 553 46.5
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 8.2e-134 481.5 559 45.8
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 4.1e-133 479.2 548 47.4
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 5.3e-133 478.8 557 46.3
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 6.9e-133 478.4 537 46.7
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.2e-132 477.6 553 47.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.0e-132 476.9 549 47.7
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 3.4e-132 476.1 557 45.1
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 3.4e-132 476.1 559 45.4
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.3e-131 474.2 555 47.0
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 3.8e-131 472.6 549 46.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 8.5e-131 471.5 551 45.0
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.2e-130 469.5 553 44.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 4.2e-130 469.2 606 45.0
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 5.5e-130 468.8 556 44.6
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 7.2e-130 468.4 545 46.8
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.2e-129 467.6 551 47.2
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 2.1e-129 466.8 552 45.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 3.6e-129 466.1 549 45.7
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 7.9e-129 464.9 557 44.3
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.0e-128 464.5 556 44.2
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 1.0e-128 464.5 554 45.8
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.8e-128 463.8 557 46.3
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 3.0e-128 463.0 548 45.8
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.1e-127 461.1 557 44.7
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.5e-127 460.7 553 45.0
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 2.0e-127 460.3 557 44.7
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 9.7e-127 458.0 556 45.0
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 2.2e-126 456.8 560 47.0
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.8e-126 456.4 553 44.5
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 8.2e-126 454.9 553 43.0
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.8e-125 453.8 550 45.5
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.8e-125 453.8 551 44.6
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 3.1e-125 453.0 557 43.3
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 6.9e-125 451.8 553 44.3
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 7.7e-124 448.4 575 42.8
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.0e-123 448.0 551 45.2
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.3e-123 447.6 551 43.6
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.3e-123 447.6 551 45.4
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.7e-123 447.2 551 45.0
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.2e-123 446.8 554 44.6
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 2.9e-123 446.4 554 44.6
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 3.8e-123 446.0 552 44.9
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 5.0e-123 445.7 486 47.7
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.4e-122 444.1 593 42.7
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.2e-122 443.0 553 43.8
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 3.2e-122 443.0 552 44.0
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 7.2e-122 441.8 552 42.8
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.2e-121 441.0 551 44.3
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 3.6e-121 439.5 535 44.5
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 7.9e-121 438.3 554 42.8
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 2.3e-120 436.8 553 43.6
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 8.8e-120 434.9 499 46.5
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 6.5e-115 418.7 505 46.3
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.6e-113 414.1 553 40.7
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.6e-113 412.9 472 45.8
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.0e-112 411.4 481 47.0
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 2.8e-110 403.3 553 41.2
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 3.7e-110 402.9 561 42.8
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.4e-109 400.2 637 38.9
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.3e-107 394.4 572 41.8
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 3.8e-107 392.9 442 48.4
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 8.5e-107 391.7 566 42.4
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 6.3e-102 375.6 497 42.3
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 7.0e-101 372.1 554 40.3
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.0e-96 358.2 459 43.6
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 5.4e-85 319.3 483 37.7
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.3e-82 309.7 318 52.5
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 9.5e-82 308.5 563 34.6
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 6.1e-81 305.8 393 43.8
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.1e-77 295.0 564 33.9
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 2.6e-71 273.9 574 31.9
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 7.0e-69 265.8 575 33.0
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.3e-67 261.5 568 32.7
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 7.1e-61 239.2 495 33.1
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 7.8e-52 209.1 221 51.6
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.2e-36 158.7 109 67.9
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.7e-33 147.1 169 45.6
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.2e-31 142.1 253 33.2
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 4.9e-30 136.7 216 38.4
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 4.6e-28 130.2 164 48.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.1e-24 119.0 76 72.4
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.1e-18 99.0 51 100.0
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 8.2e-17 92.8 124 37.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 1.1e-16 92.4 112 40.2
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 2.5e-10 71.2 89 42.7
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 2.9e-06 57.8 57 49.1


User provided reference genes

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