Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.4e-43 177.6 89 100.0
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.7e-39 165.6 87 95.4
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 2.0e-08 62.4 84 39.3
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 2.7e-08 62.0 63 44.4
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 4.5e-08 61.2 67 41.8
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.0e-07 60.1 53 49.1
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 1.0e-07 60.1 53 49.1
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 1.0e-07 60.1 61 50.8
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 1.3e-07 59.7 66 42.4
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 2.9e-07 58.5 84 36.9
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 3.9e-07 58.2 59 44.1
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 5.0e-07 57.8 58 46.6
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 5.0e-07 57.8 76 39.5
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 6.6e-07 57.4 59 44.1
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 6.6e-07 57.4 84 36.9
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 6.6e-07 57.4 61 44.3
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 8.6e-07 57.0 59 42.4
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 8.6e-07 57.0 63 41.3
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 8.6e-07 57.0 64 43.8
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.9e-06 55.8 53 45.3
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.9e-06 55.8 76 39.5
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 2.5e-06 55.5 65 44.6
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 3.3e-06 55.1 50 42.0
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 4.3e-06 54.7 57 38.6
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 4.3e-06 54.7 51 43.1
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.3e-06 54.7 59 40.7
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.3e-06 54.7 47 44.7
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 4.3e-06 54.7 64 42.2
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 4.3e-06 54.7 66 42.4
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 4.3e-06 54.7 48 43.8
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 5.6e-06 54.3 63 44.4
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 7.3e-06 53.9 58 51.7
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 7.3e-06 53.9 58 44.8
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 7.3e-06 53.9 63 39.7
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 7.3e-06 53.9 49 42.9
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 7.3e-06 53.9 63 44.4
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 9.5e-06 53.5 73 39.7


User provided reference genes

Program Settings